TomoSeq data search

Data search

Results for MligTC455_08479

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08479

25

0.52

Mlig455_069908

Neo: -

Age: -

Mlig455_069908 {REF} {Length: 1165} {RNA1310_92371} {RNA815_51913}

Cumulative graph for MligTC455_08479

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.062	0.764	0.99929	1.00000
RegionR2	2.137	0.764	1.00000	1.00000
RegionR3	0.348	0.764	1.00000	1.00000
RegionR4	-1.991	0.764	1.00000	1.00000
RegionR5	-0.487	0.764	0.99959	1.00000
RegionR6	0.351	0.764	0.99982	1.00000
RegionR7	0.788	0.764	1.00000	1.00000
RegionR8	0.918	0.764	0.99974	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.478	0.764	1.00000	1.00000
RegenerationR2	3.879	0.764	0.09898	0.49782
RegenerationR3	4.146	0.764	0.10087	0.50556
RegenerationR4	1.992	0.764	0.15760	0.58907
RegenerationR5	3.19	0.764	0.09599	0.47450
RegenerationR6	1.27	0.764	0.27219	0.62219
RegenerationBL	5.186	0.764	0.03802	0.22089
RegenerationTP	5.466	0.764	0.08602	0.46354

Genes with expression patterns similar to MligTC455_08479

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08479	25	0.52	Mlig455_069908	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_069908 {REF} {Length: 1165} {RNA1310_92371} {RNA815_51913}
2.	MligTC455_31012	19	0.4	Mlig455_028966	Neo: - Age: -		0.985	-	-	-	-	0.985	-	Mlig455_028966 {REF} {Length: 2007} {RNA1509_4697} {RNA1310_228} {RNA815_19009}
3.	MligTC455_01487	17	0.34	Mlig455_037695	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_037695 {REF} {Length: 240} {NoTransDecoderORF}
4.	MligTC455_27003	147	3.06	Mlig455_020285	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_020285 {REF} {Length: 2159} {Pfam: Integrase core domain [PF00665.28, score=39.4]} {RNA1509_6282} {RNA1310_617} {RNA815_3663}
5.	MligTC455_43222	2743	57.14	Mlig455_047173	Neo: - Age: -	RAC1	0.963	-	-	-	-	0.963	-	Mlig455_047173 {REF} {Length: 1417} {Pfam: Ras family [PF00071.24, score=176.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.8]; ADP-ribosylation factor family [PF00025.23, score=36.6]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=308, Expect=5e-108]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=306, Expect=4e-107]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=301, Expect=3e-105]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=308, Expect=3e-108]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=304, Expect=2e-106]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=301, Expect=2e-105]} {Dmel: FBgn0010333, Rac1, [Score=306, Expect=2e-107]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=300, Expect=5e-105]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=287, Expect=2e-100]} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1310_36739, RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926, RNA815_17200}
6.	MligTC455_07285	48	1	Mlig455_045441	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_045441 {REF} {Length: 504} {NoTransDecoderORF}
7.	MligTC455_49587	217	4.52	Mlig455_070355	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.859		0.954	-	-	-	-	0.954	-	Mlig455_070355 {REF} {Length: 2001} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.1]; Prokaryotic RING finger family 4 [PF14447.8, score=23.9]} {RNA1509_9323} {RNA1310_15784.1} {RNA815_1092}
8.	MligTC455_33541	737	15.35	Mlig455_018383	Neo: - Age: - Region-enriched R7: 1.927/0.00000 Regeneration-depleted BL: -3.014 Regeneration-depleted R6: -2.524 Regeneration-depleted R4: -2.464		0.953	-	-	-	-	0.953	-	Mlig455_018383 {REF} {Length: 4603} {Pfam: Integrase core domain [PF00665.28, score=38.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_22047} {RNA1310_12146, RNA1509_22047} {RNA1509_22047, RNA815_12140}
9.	MligTC455_45401	2978	62.05	Mlig455_001360	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_001360 {REF} {Length: 535} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.2]; Prokaryotic RING finger family 4 [PF14447.8, score=20.5]} {RNA1509_7545} {RNA1310_72123} {RNA815_38925.1}
10.	MligTC455_10445	51	1.06	Mlig455_023947	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_023947 {REF} {Length: 580} {NoTransDecoderORF} {RNA1509_32472} {RNA1310_25828} {RNA815_4805}
11.	MligTC455_12793	154	3.2	Mlig455_035462	Neo: - Age: - Region-enriched R2: 3.292/0.00953	CSNK1D	0.951	-	-	-	-	0.951	-	Mlig455_035462 {REF} {Length: 2870} {Pfam: Protein kinase domain [PF00069.27, score=97.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.1]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=21.1]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [RH, Score=578, Expect=0.0]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [RH, Score=573, Expect=0.0]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [RH, Score=578, Expect=0.0]; ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0002413, dco, discs overgrown, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [RH, Score=499, Expect=1e-176]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_19984} {RNA1310_23975} {RNA815_12595}
12.	MligTC455_15815	168	3.49	Mlig455_016990	Neo: - Age: Up-Up-Down		0.951	-	-	-	-	0.951	-	Mlig455_016990 {REF} {Length: 1221} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.2]} {RNA1310_21380} {RNA815_8662}

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