Data search


search
Exact
Search

Results for MligTC455_43234

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43234 20 0.42 Mlig455_047739

Neo: -

Age: -

Mlig455_047739 {REF} {Length: 899} {RNA1310_56027} {RNA815_46180}

Cumulative graph for MligTC455_43234

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.199 0.654 1.00000 1.00000
RegionR2 0.902 0.654 0.99969 1.00000
RegionR3 2.45 0.654 0.07351 0.48050
RegionR4 -0.179 0.654 0.65384 0.95526
RegionR5 -0.256 0.654 0.23070 0.53735
RegionR6 2.272 0.654 0.11653 0.62270
RegionR7 -0.998 0.654 0.99986 1.00000
RegionR8 -0.992 0.654 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.974 0.654 0.99978 1.00000
RegenerationR2 0.939 0.654 0.99983 1.00000
RegenerationR3 1.574 0.654 0.10695 0.51720
RegenerationR4 1.489 0.654 0.12216 0.53179
RegenerationR5 0.461 0.654 0.49880 0.85784
RegenerationR6 -0.991 0.654 0.46780 0.78271
RegenerationBL 0.684 0.654 0.99989 1.00000
RegenerationTP 1.534 0.654 0.99980 1.00000


Genes with expression patterns similar to MligTC455_43234

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43234 20 0.42 Mlig455_047739

Neo: -

Age: -

1 - - - - - 1.000 Mlig455_047739 {REF} {Length: 899} {RNA1310_56027} {RNA815_46180}
2. MligTC455_20990 179 3.72 Mlig455_022232

Neo: -

Age: logFC(26M/2M)=6.763

Region-enriched R3: 7.994/0.00000

MEP1B 0.984 - - - - - 0.984 Mlig455_022232 {REF} {Length: 921} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=158.6]} {Human: ENSG00000141434, MEP1B, meprin A subunit beta, [RH, Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000024313, Mep1b, meprin 1 beta, [RH, Score=132, Expect=1e-34]} {Dmel: FBgn0039069, CG6763, [RH, Score=147, Expect=3e-42]} {Celegans: WBGene00003525, nas-6, Zinc metalloproteinase nas-6, [RH, Score=143, Expect=8e-41]} {Smed: dd_Smed_v6_85_0_1, dd_Smed_v6_85_0_1, [RH, Score=131, Expect=3e-37]} {RNA1509_2621} {RNA1310_42790.1} {RNA815_21158.1}
3. MligTC455_20991 187 3.89 Mlig455_022250

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=6.428

Region-enriched R3: 6.761/0.00001

MEP1B 0.984 - - - - - 0.984 Mlig455_022250 {REF} {Length: 892} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=158.6]} {Human: ENSG00000141434, MEP1B, meprin A subunit beta, [RH, Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000024313, Mep1b, meprin 1 beta, [RH, Score=132, Expect=1e-34]} {Dmel: FBgn0039069, CG6763, [RH, Score=147, Expect=3e-42]} {Celegans: WBGene00003525, nas-6, Zinc metalloproteinase nas-6, [RH, Score=143, Expect=8e-41]} {Smed: dd_Smed_v6_85_0_1, dd_Smed_v6_85_0_1, [RH, Score=131, Expect=3e-37]} {RNA1509_2621} {RNA1310_42790.1} {RNA815_21158.1}
4. MligTC455_43233 32 0.67 Mlig455_027678

Neo: -

Age: -

0.981 - - - - - 0.981 Mlig455_027678 {REF} {Length: 1441} {RNA1509_16715} {RNA1310_56027} {RNA815_46180}
5. MligTC455_47152 7029 146.44 Mlig455_034047, Mlig455_034073

Neo: -

Age: Down-Up-Up

Region-specific R3: 6.221

Region-enriched R3: 5.965/0.00000

WSCD2 0.958 - - - - - 0.958

Mlig455_034047 {REF} {Length: 1396} {Pfam: WSC domain [PF01822.21, score=57.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=63.2, Expect=1e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=62.8, Expect=1e-10]} {RNA1509_26136, RNA1509_34383, RNA1509_46552, RNA1509_4725} {RNA1310_32158, RNA1509_26136, RNA1509_46552, RNA1509_4725} {RNA1509_26136, RNA1509_46552, RNA1509_4725, RNA815_15166}

Mlig455_034073 {REF} {Length: 1503} {Pfam: WSC domain [PF01822.21, score=57.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=63.2, Expect=1e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=62.8, Expect=1e-10]} {RNA1509_30886, RNA1509_34383} {RNA1310_32158, RNA1509_30886, RNA1509_34383} {RNA1509_30886, RNA1509_34383, RNA815_15166}
6. MligTC455_28992 248 5.17 Mlig455_007574

Neo: -

Age: -

Region-enriched R3: 5.359/0.00013

SIX1 0.957 - - - - - 0.957 Mlig455_007574 {REF} {Length: 2756} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=146.3]; Homeodomain [PF00046.31, score=56.2]; Homeobox KN domain [PF05920.13, score=49.9]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [Score=313, Expect=9e-104]; ENSG00000170577, SIX2, SIX homeobox 2, [Score=307, Expect=3e-101]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=313, Expect=5e-104]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=308, Expect=1e-101]} {Dmel: FBgn0003460, so, sine oculis, [Score=303, Expect=3e-98]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=246, Expect=2e-78]} {Smed: dd_Smed_v6_15436_0_1, dd_Smed_v6_15436_0_1, [RH, Score=326, Expect=2e-106]} {RNA1509_55511} {RNA1310_27700, RNA1509_55511} {RNA1509_55511, RNA815_16067}
7. MligTC455_22700 17 0.36 Mlig455_007413, Mlig455_007525

Neo: -

Age: -

0.955 - - - - - 0.955

Mlig455_007413 {REF} {Length: 791} {NoTransDecoderORF} {RNA1310_90422}

Mlig455_007525 {REF} {Length: 900} {NoTransDecoderORF} {RNA1310_90422}
8. MligTC455_36159 12 0.24 Mlig455_038776, Mlig455_067680

Neo: -

Age: -

0.955 - - - - - 0.955

Mlig455_038776 {REF} {Length: 1184} {Smed: dd_Smed_v6_47583_0_1, dd_Smed_v6_47583_0_1, [RH, Score=80.9, Expect=3e-18]}

Mlig455_067680 {REF} {Length: 5269} {Pfam: Immunoglobulin domain [PF13895.8, score=62.2]; Immunoglobulin domain [PF13927.8, score=45.8]; Immunoglobulin I-set domain [PF07679.18, score=33.0]; F5/8 type C domain [PF00754.27, score=32.4]; Immunoglobulin domain [PF00047.27, score=25.2]; Ig-like C2-type domain [PF06328.13, score=23.4]; Immunoglobulin V-set domain [PF07686.19, score=23.3]; Izumo-like Immunoglobulin domain [PF16706.7, score=23.0]; Sad1 / UNC-like C-terminal [PF07738.15, score=18.8]} {RNA1310_51630} {RNA815_49405}
9. MligTC455_05875 31 0.65 Mlig455_011261

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.955

Region-enriched R4: 3.843/0.03289

0.954 - - - - - 0.954 Mlig455_011261 {REF} {Length: 1105} {NoTransDecoderORF} {RNA1509_25900} {RNA1310_26604.1, RNA1509_25900} {RNA1509_25900, RNA815_43886}
10. MligTC455_38189 14 0.29 Mlig455_029014

Neo: -

Age: -

SOX2 0.954 - - - - - 0.954 Mlig455_029014 {REF} {Length: 1736} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=84.5]; HMG-box domain [PF09011.12, score=39.1]; Anti-sigma-K factor rskA [PF10099.11, score=19.1]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=127, Expect=1e-33]; ENSG00000125285, SOX21, SRY-box 21, [Score=126, Expect=4e-34]; ENSG00000182968, SOX1, SRY-box 1, [Score=125, Expect=2e-32]; ENSG00000168875, SOX14, SRY-box 14, [Score=124, Expect=2e-33]; ENSG00000134595, SOX3, SRY-box 3, [Score=123, Expect=2e-31]; ENSG00000129194, SOX15, SRY-box 15, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=127, Expect=3e-34]; ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=127, Expect=6e-34]; ENSMUSG00000096014, Sox1, SRY (sex determining region Y)-box 1, [Score=125, Expect=1e-32]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=124, Expect=9e-34]; ENSMUSG00000045179, Sox3, SRY (sex determining region Y)-box 3, [Score=124, Expect=7e-32]; ENSMUSG00000041287, Sox15, SRY (sex determining region Y)-box 15, [Score=122, Expect=7e-33]} {Dmel: FBgn0036411, Sox21a, [Score=127, Expect=1e-33]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [Score=132, Expect=7e-35]} {RNA1310_94698}
11. MligTC455_11729 86 1.78 Mlig455_050561

Neo: -

Age: Down-Up-Down

SLC6A5 0.951 - - - - - 0.951 Mlig455_050561 {REF} {Length: 2387} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=630.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=4e-180]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=536, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=489, Expect=6e-160]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=423, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=494, Expect=9e-169]} {RNA1509_16667} {RNA1310_11330.2, RNA1509_16667} {RNA1509_16667, RNA815_5814}
12. MligTC455_53186 27 0.56 Mlig455_067776, Mlig455_068918

Neo: -

Age: -

THAP8 0.95 - - - - - 0.950

Mlig455_067776 {REF} {Length: 2609} {Pfam: THAP domain [PF05485.14, score=33.7]} {Human: ENSG00000161277, THAP8, THAP domain containing 8, [Score=49.3, Expect=9e-07]} {Mouse: ENSMUSG00000026279, Thap4, THAP domain containing 4, [Score=46.6, Expect=6e-06]} {RNA1310_48228} {RNA815_37322}

Mlig455_068918 {REF} {Length: 411} {NoTransDecoderORF} {RNA1310_87937} {RNA815_47786}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA