Data search
Results for MligTC455_43263
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43263 | 1622 | 33.80 | Mlig455_011319 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.073/0.01527 |
ARPC3 | Mlig455_011319 {REF} {Length: 1062} {TRANSSPLICED} {Pfam: ARP2/3 complex ARPC3 (21 kDa) subunit [PF04062.16, score=254.3]} {Human: ENSG00000111229, ARPC3, actin related protein 2/3 complex subunit 3, [RH, Score=238, Expect=1e-80]} {Mouse: ENSMUSG00000029465, Arpc3, actin related protein 2/3 complex, subunit 3, [RH, Score=236, Expect=4e-80]} {Dmel: FBgn0038369, Arpc3A, Actin-related protein 2/3 complex, subunit 3A, [RH, Score=225, Expect=8e-76]} {Celegans: WBGene00000203, arx-5, Probable actin-related protein 2/3 complex subunit 3, [RH, Score=171, Expect=2e-54]} {Smed: dd_Smed_v6_4649_0_1, dd_Smed_v6_4649_0_1, [RH, Score=232, Expect=9e-79]} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1310_7583.1, RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381, RNA815_3441} |
Cumulative graph for MligTC455_43263
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.101 | 5.174 | 0.88938 | 1.00000 | |
| RegionR2 | -0.836 | 5.174 | 0.01537 | 0.13089 | |
| RegionR3 | -0.152 | 5.174 | 0.60319 | 1.00000 | |
| RegionR4 | 1.073 | 5.174 | 0.00163 | 0.01527 | |
| RegionR5 | 0.087 | 5.174 | 0.76127 | 1.00000 | |
| RegionR6 | 0.18 | 5.174 | 0.54033 | 1.00000 | |
| RegionR7 | 0.014 | 5.174 | 0.96999 | 1.00000 | |
| RegionR8 | -0.266 | 5.174 | 0.59789 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.697 | 5.174 | 0.52096 | 1.00000 | |
| RegenerationR2 | 0.225 | 5.174 | 0.45696 | 0.85089 | |
| RegenerationR3 | 0.513 | 5.174 | 0.11672 | 0.53266 | |
| RegenerationR4 | 0.41 | 5.174 | 0.20765 | 0.65471 | |
| RegenerationR5 | 0.985 | 5.174 | 0.00162 | 0.06960 | |
| RegenerationR6 | 0.671 | 5.174 | 0.04002 | 0.25033 | |
| RegenerationBL | 0.49 | 5.174 | 0.16271 | 0.48355 | |
| RegenerationTP | 0.425 | 5.174 | 0.29608 | 0.74126 |
Genes with expression patterns similar to MligTC455_43263
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43263 | 1622 | 33.8 | Mlig455_011319 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.073/0.01527 |
ARPC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011319 {REF} {Length: 1062} {TRANSSPLICED} {Pfam: ARP2/3 complex ARPC3 (21 kDa) subunit [PF04062.16, score=254.3]} {Human: ENSG00000111229, ARPC3, actin related protein 2/3 complex subunit 3, [RH, Score=238, Expect=1e-80]} {Mouse: ENSMUSG00000029465, Arpc3, actin related protein 2/3 complex, subunit 3, [RH, Score=236, Expect=4e-80]} {Dmel: FBgn0038369, Arpc3A, Actin-related protein 2/3 complex, subunit 3A, [RH, Score=225, Expect=8e-76]} {Celegans: WBGene00000203, arx-5, Probable actin-related protein 2/3 complex subunit 3, [RH, Score=171, Expect=2e-54]} {Smed: dd_Smed_v6_4649_0_1, dd_Smed_v6_4649_0_1, [RH, Score=232, Expect=9e-79]} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1310_7583.1, RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381, RNA815_3441} |
| 2. | MligTC455_47405 | 1010 | 21.04 | Mlig455_039770 | Neo: - Age: - |
SLC6A5 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_039770 {REF} {Length: 4100} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=640.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=537, Expect=0.0]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=539, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=487, Expect=3e-158]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=425, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=500, Expect=2e-170]} {RNA1509_15175, RNA1509_22639, RNA1509_5227} {RNA1310_4097.1, RNA1509_15175, RNA1509_22639} {RNA1509_15175, RNA1509_22639, RNA815_1072.1} |
| 3. | MligTC455_48005 | 263 | 5.49 | Mlig455_050181 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.846/0.00759 |
PSMD2 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_050181 {REF} {Length: 4400} {Pfam: RPN1 N-terminal domain [PF17781.3, score=362.1]; 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal [PF18051.3, score=83.9]; Proteasome/cyclosome repeat [PF01851.24, score=58.0]; Ribosomal protein L9, N-terminal domain [PF01281.21, score=22.7]} {Human: ENSG00000175166, PSMD2, proteasome 26S subunit, non-ATPase 2, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000006998, Psmd2, proteasome (prosome, macropain) 26S subunit, non-ATPase, 2, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0028695, Rpn1, Regulatory particle non-ATPase 1, [RH, Score=829, Expect=0.0]} {Celegans: WBGene00004458, rpn-1, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=788, Expect=0.0]} {Smed: dd_Smed_v6_2481_0_1, dd_Smed_v6_2481_0_1, [RH, Score=929, Expect=0.0]} {RNA1509_1075} {RNA1310_3428} {RNA815_1690} |
| 4. | MligTC455_21712 | 6583 | 137.15 | Mlig455_061536 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.260 |
SERBP1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_061536 {REF} {Length: 2886} {TRANSSPLICED} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.3]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=8e-10]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_225, RNA1509_7006} {RNA1310_11680.1, RNA1509_225, RNA1509_7006} {RNA1509_225, RNA1509_7006, RNA815_4163.1} |
| 5. | MligTC455_53819 | 234 | 4.88 | Mlig455_029142, Mlig455_032108 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_029142 {REF} {Length: 262} {NoTransDecoderORF} {RNA1310_91707} {RNA815_47119} Mlig455_032108 {REF} {Length: 1704} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_88113} {RNA815_47119} |
|
| 6. | MligTC455_49651 | 88 | 1.84 | Mlig455_057435 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_057435 {REF} {Length: 1917} {Pfam: Globin [PF00042.24, score=35.4]} {RNA1509_44858} {RNA1310_41214} {RNA815_18425} | |
| 7. | MligTC455_29705 | 84 | 1.74 | Mlig455_068931 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_068931 {REF} {Length: 4351} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=210.9]; PIF1-like helicase [PF05970.16, score=107.2]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.8, Expect=1e-09]} {Celegans: WBGene00019136, F59H6.5, [Score=468, Expect=8e-144]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [RH, Score=125, Expect=9e-34]} {RNA1509_53692} {RNA1310_981} {RNA815_15863} | |
| 8. | MligTC455_31485 | 214 | 4.45 | Mlig455_069811 | Neo: - Age: logFC(26M/2M)=-0.319 |
XIAP | 0.95 | - | - | 0.950 | - | - | - | Mlig455_069811 {REF} {Length: 3934} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.2]; Inhibitor of Apoptosis domain [PF00653.23, score=36.8]; Prokaryotic RING finger family 4 [PF14447.8, score=20.3]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=78.6, Expect=9e-15]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=77.0, Expect=2e-14]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=90.9, Expect=6e-19]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [Score=62.0, Expect=4e-10]} {RNA1509_28705, RNA1509_50002} {RNA1310_7949.1, RNA1509_28705, RNA1509_50002} {RNA1509_28705, RNA1509_50002, RNA815_4630} |
Berezikov Lab - 2020-2021 © ERIBA