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Results for MligTC455_47405

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47405 1010 21.04 Mlig455_039770

Neo: -

Age: -

 SLC6A5 Mlig455_039770 {REF} {Length: 4100} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=640.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=537, Expect=0.0]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=539, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=487, Expect=3e-158]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=425, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=500, Expect=2e-170]} {RNA1509_15175, RNA1509_22639, RNA1509_5227} {RNA1310_4097.1, RNA1509_15175, RNA1509_22639} {RNA1509_15175, RNA1509_22639, RNA815_1072.1}

Cumulative graph for MligTC455_47405

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.234 4.72 0.16100 0.78212
RegionR2 0.188 4.72 0.68276 1.00000
RegionR3 0.596 4.72 0.11714 0.59346
RegionR4 0.859 4.72 0.05739 0.21153
RegionR5 -0.084 4.72 0.85078 1.00000
RegionR6 0.114 4.72 0.77943 1.00000
RegionR7 0.468 4.72 0.33022 0.96526
RegionR8 0.093 4.72 0.87632 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.304 4.72 0.91921 1.00000
RegenerationR2 0.003 4.72 0.99376 1.00000
RegenerationR3 -0.038 4.72 0.91707 1.00000
RegenerationR4 -0.157 4.72 0.68524 0.94738
RegenerationR5 0.803 4.72 0.02698 0.27904
RegenerationR6 0.768 4.72 0.04261 0.25753
RegenerationBL 0.478 4.72 0.26132 0.61949
RegenerationTP 0.382 4.72 0.42328 0.84673


Genes with expression patterns similar to MligTC455_47405

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47405 1010 21.04 Mlig455_039770

Neo: -

Age: -

 SLC6A5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039770 {REF} {Length: 4100} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=640.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=537, Expect=0.0]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=539, Expect=0.0]} {Dmel: FBgn0034911, CG5549, [Score=487, Expect=3e-158]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=425, Expect=6e-141]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=500, Expect=2e-170]} {RNA1509_15175, RNA1509_22639, RNA1509_5227} {RNA1310_4097.1, RNA1509_15175, RNA1509_22639} {RNA1509_15175, RNA1509_22639, RNA815_1072.1}
2. MligTC455_53513 1255 26.15 Mlig455_028733

Neo: -

Age: logFC(26M/2M)=-0.303

Region-enriched R2: 1.279/0.01798

 IFT172 1.657 0.951 0.706 - - - - Mlig455_028733 {REF} {Length: 5542} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.2]; Region in Clathrin and VPS [PF00637.22, score=37.8]; WD domain, G-beta repeat [PF00400.34, score=31.8]; Tetratricopeptide repeat [PF13176.8, score=29.3]; Coatomer WD associated region [PF04053.16, score=21.1]} {Human: ENSG00000138002, IFT172, intraflagellar transport 172, [RH, Score=2013, Expect=0.0]} {Mouse: ENSMUSG00000038564, Ift172, intraflagellar transport 172, [RH, Score=2020, Expect=0.0]} {Dmel: FBgn0035317, Oseg2, Outer segment 2, [RH, Score=1459, Expect=0.0]} {Celegans: WBGene00003883, osm-1, Intraflagellar transport protein osm-1, [RH, Score=1306, Expect=0.0]} {Smed: dd_Smed_v6_10638_0_1, dd_Smed_v6_10638_0_1, [RH, Score=1736, Expect=0.0]} {RNA1509_20015, RNA1509_2378} {RNA1310_994, RNA1509_20015, RNA1509_2378} {RNA1509_20015, RNA1509_2378, RNA815_250}
3. MligTC455_52992 1874 39.04 Mlig455_020430, Mlig455_020441

Neo: -

Age: Down-Down-Up

 BRK1 0.978 - - - - - 0.978

Mlig455_020430 {REF} {Length: 572} {TRANSSPLICED} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=23.2]} {Human: ENSG00000254999, BRK1, BRICK1, SCAR/WAVE actin nucleating complex subunit, [RH, Score=87.8, Expect=4e-24]} {Mouse: ENSMUSG00000033940, Brk1, BRICK1, SCAR/WAVE actin-nucleating complex subunit, [RH, Score=88.6, Expect=2e-24]} {Dmel: FBgn0061198, HSPC300, Haematopoietic stem/progenitor cell protein 300, [RH, Score=85.5, Expect=2e-23]} {Celegans: WBGene00013308, nuo-3, NADH Ubiquinone Oxidoreductase, [RH, Score=70.1, Expect=2e-17]} {Smed: dd_Smed_v6_1835_0_1, dd_Smed_v6_1835_0_1, [RH, Score=68.2, Expect=6e-17]} {RNA1509_8330} {RNA1310_46221, RNA1509_8330} {RNA1509_8330, RNA815_31100}

Mlig455_020441 {REF} {Length: 571} {TRANSSPLICED} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=23.2]} {Human: ENSG00000254999, BRK1, BRICK1, SCAR/WAVE actin nucleating complex subunit, [RH, Score=87.8, Expect=4e-24]} {Mouse: ENSMUSG00000033940, Brk1, BRICK1, SCAR/WAVE actin-nucleating complex subunit, [RH, Score=88.6, Expect=2e-24]} {Dmel: FBgn0061198, HSPC300, Haematopoietic stem/progenitor cell protein 300, [RH, Score=85.5, Expect=2e-23]} {Celegans: WBGene00013308, nuo-3, NADH Ubiquinone Oxidoreductase, [RH, Score=70.1, Expect=2e-17]} {Smed: dd_Smed_v6_1835_0_1, dd_Smed_v6_1835_0_1, [RH, Score=68.2, Expect=6e-17]} {RNA1509_8330} {RNA1310_46221} {RNA815_31100}
4. MligTC455_43263 1622 33.8 Mlig455_011319

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.073/0.01527

 ARPC3 0.963 - - - - - 0.963 Mlig455_011319 {REF} {Length: 1062} {TRANSSPLICED} {Pfam: ARP2/3 complex ARPC3 (21 kDa) subunit [PF04062.16, score=254.3]} {Human: ENSG00000111229, ARPC3, actin related protein 2/3 complex subunit 3, [RH, Score=238, Expect=1e-80]} {Mouse: ENSMUSG00000029465, Arpc3, actin related protein 2/3 complex, subunit 3, [RH, Score=236, Expect=4e-80]} {Dmel: FBgn0038369, Arpc3A, Actin-related protein 2/3 complex, subunit 3A, [RH, Score=225, Expect=8e-76]} {Celegans: WBGene00000203, arx-5, Probable actin-related protein 2/3 complex subunit 3, [RH, Score=171, Expect=2e-54]} {Smed: dd_Smed_v6_4649_0_1, dd_Smed_v6_4649_0_1, [RH, Score=232, Expect=9e-79]} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1310_7583.1, RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381} {RNA1509_12147, RNA1509_17259, RNA1509_23495, RNA1509_30722, RNA1509_36222, RNA1509_53736, RNA1509_5381, RNA815_3441}

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