Data search


search
Exact
Search

Results for MligTC455_43271

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43271 21 0.44 Mlig455_016226

Neo: -

Age: -

Mlig455_016226 {REF} {Length: 875} {RNA1310_7789} {RNA815_12366}

Cumulative graph for MligTC455_43271

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.849 0.817 0.99998 1.00000
RegionR2 -1.323 0.817 0.99990 1.00000
RegionR3 -0.866 0.817 0.99994 1.00000
RegionR4 1.242 0.817 1.00000 1.00000
RegionR5 -0.61 0.817 0.99993 1.00000
RegionR6 -0.937 0.817 1.00000 1.00000
RegionR7 -0.23 0.817 1.00000 1.00000
RegionR8 -0.124 0.817 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.175 0.817 0.99996 1.00000
RegenerationR2 4.05 0.817 0.02149 0.24073
RegenerationR3 3.194 0.817 0.24508 0.67914
RegenerationR4 1.931 0.817 0.30178 0.74377
RegenerationR5 2.665 0.817 0.18810 0.61831
RegenerationR6 -0.362 0.817 0.99996 1.00000
RegenerationBL -0.214 0.817 0.99998 1.00000
RegenerationTP 3.515 0.817 0.33730 0.78134


Genes with expression patterns similar to MligTC455_43271

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43271 21 0.44 Mlig455_016226

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_016226 {REF} {Length: 875} {RNA1310_7789} {RNA815_12366}
2. MligTC455_07504 85 1.77 Mlig455_001458

Neo: -

Age: -

0.975 - - - - - 0.975 Mlig455_001458 {REF} {Length: 4238} {RNA1310_78279}
3. MligTC455_46734 116 2.41 Mlig455_041816

Neo: -

Age: -

0.974 - - - - - 0.974 Mlig455_041816 {REF} {Length: 1415} {RNA1509_50573} {RNA1310_17892.1} {RNA815_32856.1}
4. MligTC455_40777 56 1.17 Mlig455_041571

Neo: -

Age: -

Region-enriched R5: 3.787/0.03010

0.973 - - - - - 0.973 Mlig455_041571 {REF} {Length: 726} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_46869} {RNA815_14926.1}
5. MligTC455_10978 30 0.63 Mlig455_034533, Mlig455_034574

Neo: -

Age: -

0.972 - - - - - 0.972

Mlig455_034533 {REF} {Length: 838} {Pfam: RNA-binding, Nab2-type zinc finger [PF14608.8, score=39.5]; Domain of unknown function (DUF4408) [PF14364.8, score=29.9]} {RNA1509_41811} {RNA1310_10699} {RNA815_36851}

Mlig455_034574 {REF} {Length: 643} {Pfam: RNA-binding, Nab2-type zinc finger [PF14608.8, score=36.4]; Domain of unknown function (DUF4408) [PF14364.8, score=28.6]} {RNA1509_41811} {RNA1310_10699} {RNA815_36851}
6. MligTC455_08904 11 0.23 Mlig455_005592

Neo: -

Age: -

0.97 - - - - - 0.970 Mlig455_005592 {REF} {Length: 905} {TRANSSPLICED} {RNA1509_36849} {RNA1310_72794.1} {RNA815_39498}
7. MligTC455_21821 8 0.17 Mlig455_022821

Neo: -

Age: -

0.968 - - - - 0.968 - Mlig455_022821 {REF} {Length: 2089} {NoTransDecoderORF} {RNA1509_28510} {RNA1310_68838} {RNA815_48322}
8. MligTC455_17666 155 3.23 Mlig455_024776, Mlig455_066107, Mlig455_068666

Neo: -

Age: -

SYDE2 0.966 - - - - - 0.966

Mlig455_024776 {REF} {Length: 4128} {Pfam: RhoGAP domain [PF00620.29, score=133.7]; Pentapeptide repeats (9 copies) [PF13599.8, score=93.3]; Pentapeptide repeats (8 copies) [PF00805.24, score=91.0]; Choristoneura fumiferana antifreeze protein (CfAFP) [PF05264.13, score=19.3]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [RH, Score=240, Expect=7e-65]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [RH, Score=236, Expect=2e-63]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [RH, Score=288, Expect=2e-80]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [RH, Score=211, Expect=4e-56]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [RH, Score=412, Expect=5e-125]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685}

Mlig455_066107 {REF} {Length: 3249} {Pfam: RhoGAP domain [PF00620.29, score=134.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.1]; Protein of unknown function (DUF2722) [PF10846.10, score=18.6]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [RH, Score=233, Expect=3e-64]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [RH, Score=232, Expect=8e-64]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [Score=264, Expect=1e-74]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [Score=199, Expect=2e-54]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [Score=382, Expect=4e-117]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685}

Mlig455_068666 {REF} {Length: 2783} {Pfam: RhoGAP domain [PF00620.29, score=103.4]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [Score=208, Expect=6e-57]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [Score=206, Expect=1e-56]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [Score=229, Expect=4e-64]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [Score=179, Expect=3e-48]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [Score=332, Expect=4e-101]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685}
9. MligTC455_27468 40 0.84 Mlig455_013749

Neo: -

Age: -

LNPEP 0.965 - - - - - 0.965 Mlig455_013749 {REF} {Length: 4937} {Pfam: Peptidase family M1 domain [PF01433.22, score=195.1]; Peptidase M1 N-terminal domain [PF17900.3, score=121.7]} {Human: ENSG00000113441, LNPEP, leucyl and cystinyl aminopeptidase, [Score=289, Expect=5e-85]; ENSG00000172901, LVRN, laeverin, [Score=282, Expect=1e-82]; ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=277, Expect=4e-81]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=275, Expect=3e-80]} {Mouse: ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=286, Expect=2e-84]} {Dmel: FBgn0052473, CG32473, [Score=293, Expect=9e-88]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=251, Expect=2e-72]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=328, Expect=5e-100]} {RNA1509_14706} {RNA1310_6661.1} {RNA815_1900.2}
10. MligTC455_14363 57 1.18 Mlig455_014133

Neo: -

Age: -

Region-enriched R2: 4.499/0.01811

0.964 - - - - - 0.964 Mlig455_014133 {REF} {Length: 323} {NoTransDecoderORF}
11. MligTC455_45156 591 12.3 Mlig455_018705, Mlig455_018722, Mlig455_018742, Mlig455_018910

Neo: -

Age: Up-Down-Up

0.964 - - - - - 0.964

Mlig455_018705 {REF} {Length: 1236} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=32.6]} {RNA1310_45943} {RNA815_58689}

Mlig455_018722 {REF} {Length: 1053} {Pfam: Tctex-1 family [PF03645.15, score=32.6]} {RNA1310_45943} {RNA815_58689}

Mlig455_018742 {REF} {Length: 1155} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=30.7]} {Mouse: ENSMUSG00000047671, Tctex1d4, Tctex1 domain containing 4, [Score=47.0, Expect=5e-06]} {RNA1310_45943} {RNA815_58689}

Mlig455_018910 {REF} {Length: 1189} {Pfam: Tctex-1 family [PF03645.15, score=32.6]} {RNA1310_45943} {RNA815_58689}
12. MligTC455_35990 62 1.29 Mlig455_069125

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.550/0.00866

0.961 - - - - - 0.961 Mlig455_069125 {REF} {Length: 5594} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=33.4]; Reverse transcriptase-like [PF13456.8, score=30.9]} {Smed: dd_Smed_v6_17076_0_2, dd_Smed_v6_17076_0_2, [Score=181, Expect=6e-51]} {RNA1509_47541} {RNA1310_49685} {RNA815_36641}
13. MligTC455_25359 89 1.85 Mlig455_026764, Mlig455_051780

Neo: -

Age: -

0.96 - - - - - 0.960

Mlig455_026764 {REF} {Length: 465} {RNA1310_85091}

Mlig455_051780 {REF} {Length: 1387} {RNA1310_85091} {RNA815_62404}
14. MligTC455_38657 292 6.08 Mlig455_021581

Neo: -

Age: -

CPLX1 0.96 - - - - - 0.960 Mlig455_021581 {REF} {Length: 2085} {Pfam: Synaphin protein [PF05835.14, score=132.9]} {Human: ENSG00000168993, CPLX1, complexin 1, [Score=52.4, Expect=8e-09]; ENSG00000145920, CPLX2, complexin 2, [Score=50.8, Expect=1e-08]} {Mouse: ENSMUSG00000033615, Cplx1, complexin 1, [Score=53.5, Expect=2e-09]} {Dmel: FBgn0041605, cpx, complexin, [RH, Score=90.1, Expect=1e-23]} {Celegans: WBGene00022271, cpx-1, Putative complexin-1, [RH, Score=99.4, Expect=2e-27]} {Smed: dd_Smed_v6_9918_0_1, dd_Smed_v6_9918_0_1, [Score=94.4, Expect=2e-25]} {RNA1509_37151, RNA1509_38047} {RNA1310_51275, RNA1509_38047} {RNA1509_38047, RNA815_22799}
15. MligTC455_48714 132 2.74 Mlig455_037041

Neo: -

Age: -

Region-enriched R2: 4.531/0.00493

0.96 - - - - - 0.960 Mlig455_037041 {REF} {Length: 1099} {RNA1509_35038} {RNA1310_72135} {RNA815_37404}
16. MligTC455_11945 31 0.65 Mlig455_052347

Neo: -

Age: -

0.959 - - - - - 0.959 Mlig455_052347 {REF} {Length: 776} {NoTransDecoderORF}
17. MligTC455_14869 56 1.17 Mlig455_041087

Neo: -

Age: -

0.959 - - - - - 0.959 Mlig455_041087 {REF} {Length: 1408} {RNA1310_35281} {RNA815_59011}
18. MligTC455_01281 31 0.65 Mlig455_024412

Neo: -

Age: -

Regeneration-enriched R4: 6.112
Regeneration-enriched R5: 5.740

0.958 - - - - - 0.958 Mlig455_024412 {REF} {Length: 736} {NoTransDecoderORF} {RNA1310_123524}
19. MligTC455_06337 14 0.3 Mlig455_061691

Neo: -

Age: -

0.958 - - - - - 0.958 Mlig455_061691 {REF} {Length: 444} {Pfam: Ribosomal protein S31e [PF17067.7, score=19.5]} {RNA1509_37248} {RNA1310_104355} {RNA815_20899}
20. MligTC455_52402 223 4.65 Mlig455_048722

Neo: -

Age: -

Region-enriched R8: 5.458/0.00000
Region-enriched R7: 3.221/0.04638

0.958 - - - - - 0.958 Mlig455_048722 {REF} {Length: 961} {TRANSSPLICED} {RNA1310_39954.1} {RNA815_19596}
21. MligTC455_03408 164 3.43 Mlig455_019140, Mlig455_054281

Neo: -

Age: logFC(26M/2M)=-0.793

ATP11A 0.957 - - - - - 0.957

Mlig455_019140 {REF} {Length: 422} {TRANSSPLICED} {Pfam: Phospholipid-translocating ATPase N-terminal [PF16209.7, score=69.3]} {Human: ENSG00000068650, ATP11A, ATPase phospholipid transporting 11A, [Score=111, Expect=3e-29]; ENSG00000101974, ATP11C, ATPase phospholipid transporting 11C, [Score=108, Expect=5e-28]; ENSG00000058063, ATP11B, ATPase phospholipid transporting 11B (putative), [Score=106, Expect=2e-29]} {Mouse: ENSMUSG00000031441, Atp11a, ATPase, class VI, type 11A, [Score=112, Expect=7e-31]} {Dmel: FBgn0030747, CG4301, [Score=94.7, Expect=1e-23]} {Celegans: WBGene00019166, tat-2, Phospholipid-transporting ATPase, [Score=66.6, Expect=7e-14]} {Smed: dd_Smed_v6_5121_0_1, dd_Smed_v6_5121_0_1, [Score=95.5, Expect=5e-24]} {RNA1509_53106} {RNA1310_2065} {RNA815_1499}

Mlig455_054281 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=192.8]; Phospholipid-translocating ATPase N-terminal [PF16209.7, score=64.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=53.0]; E1-E2 ATPase [PF00122.22, score=51.9]; Cation transport ATPase (P-type) [PF13246.8, score=39.2]} {Human: ENSG00000068650, ATP11A, ATPase phospholipid transporting 11A, [RH, Score=790, Expect=0.0]} {Mouse: ENSMUSG00000037400, Atp11b, ATPase, class VI, type 11B, [Score=802, Expect=0.0]; ENSMUSG00000031441, Atp11a, ATPase, class VI, type 11A, [Score=773, Expect=0.0]} {Dmel: FBgn0030746, CG9981, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00019166, tat-2, Phospholipid-transporting ATPase, [Score=555, Expect=4e-177]} {Smed: dd_Smed_v6_10670_0_1, dd_Smed_v6_10670_0_1, [Score=874, Expect=0.0]} {RNA1509_53106} {RNA1310_2010.1, RNA1509_53106} {RNA1509_53106, RNA815_1499}
22. MligTC455_25318 85 1.77 Mlig455_022125

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.046/0.02891

0.957 - - - - - 0.957 Mlig455_022125 {REF} {Length: 2145} {RNA1509_17391} {RNA1310_28598} {RNA815_31621}
23. MligTC455_42825 72 1.51 Mlig455_053406

Neo: -

Age: -

0.957 - - - - - 0.957 Mlig455_053406 {REF} {Length: 1756} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_62493} {RNA815_38342}
24. MligTC455_42314 406 8.46 Mlig455_052727

Neo: -

Age: -

Region-enriched R2: 4.230/0.00183

0.956 - - - - - 0.956 Mlig455_052727 {REF} {Length: 1339} {Pfam: Hyaluronidase protein (HylP) [PF07212.13, score=19.1]} {RNA1509_51722} {RNA1310_50605} {RNA815_15783.1}
25. MligTC455_51066 526 10.97 Mlig455_044665, Mlig455_044724

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.381/0.00000

0.956 - - - - - 0.956

Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}

Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}
26. MligTC455_37280 28 0.58 Mlig455_062442

Neo: -

Age: -

Regeneration-upregulated R2: 5.418

Regeneration-enriched R2: 5.418

0.955 - - - - - 0.955 Mlig455_062442 {REF} {Length: 1537} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_23482} {RNA815_21728.1}
27. MligTC455_18569 79 1.65 Mlig455_002173, Mlig455_002274, Mlig455_002318

Neo: -

Age: -

Region-enriched R4: 6.510/0.00058

0.954 - - - - - 0.954

Mlig455_002173 {REF} {Length: 1129} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002274 {REF} {Length: 1130} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}

Mlig455_002318 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1509_52353} {RNA1310_130608} {RNA815_60304}
28. MligTC455_48713 380 7.92 Mlig455_009259, Mlig455_009268

Neo: -

Age: Down-Up-Down

Region-specific R2: 6.962

Region-enriched R2: 4.845/0.00046
Region-enriched R6: 3.343/0.03198

0.954 - - - - - 0.954

Mlig455_009259 {REF} {Length: 654} {RNA1509_35038} {RNA1310_72135} {RNA815_37404}

Mlig455_009268 {REF} {Length: 546} {RNA1509_35038} {RNA1310_72135, RNA1509_35038} {RNA1509_35038, RNA815_37404}
29. MligTC455_10199 290 6.05 Mlig455_027808

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_027808 {REF} {Length: 3251} {RNA1509_29378} {RNA1310_3505.1} {RNA815_17578}
30. MligTC455_13423 1243 25.9 Mlig455_044368

Neo: -

Age: logFC(26M/2M)=-0.595

Region-enriched R7: 3.345/0.00033
Region-enriched R6: 2.355/0.04350

Regeneration-downregulated BL: -4.170

Regeneration-depleted BL: -4.170

0.952 - - - - - 0.952 Mlig455_044368 {REF} {Length: 544} {RNA1509_13677} {RNA1310_82629.1, RNA1509_13677} {RNA1509_13677, RNA815_40883}
31. MligTC455_46583 1098 22.87 Mlig455_067509

Neo: -

Age: logFC(26M/2M)=-0.318

Region-enriched R8: 2.830/0.00000
Region-enriched R7: 1.613/0.00085

Regeneration-depleted TP: -3.677
Regeneration-depleted BL: -2.763
Regeneration-depleted R4: -2.132
Regeneration-depleted R2: -1.934

0.951 - - - - - 0.951 Mlig455_067509 {REF} {Length: 1536} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=25.3]} {Dmel: FBgn0051221, CG31221, [Score=62.8, Expect=5e-12]} {Celegans: WBGene00010290, F58H1.7, [RH, Score=66.6, Expect=1e-13]} {Smed: dd_Smed_v6_2598_0_1, dd_Smed_v6_2598_0_1, [RH, Score=173, Expect=3e-55]} {RNA1509_59060} {RNA1310_28256} {RNA815_15141.1}
32. MligTC455_56181 29 0.6 Mlig455_020088

Neo: -

Age: -

0.951 - - - - - 0.951 Mlig455_020088 {REF} {Length: 619} {NoTransDecoderORF} {RNA1310_136270}
33. MligTC455_13424 708 14.75 Mlig455_044367

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.089

Region-enriched R7: 4.024/0.00101

0.95 - - - - - 0.950 Mlig455_044367 {REF} {Length: 633} {RNA1509_34081, RNA1509_52094} {RNA1310_75122.1, RNA1509_34081, RNA1509_52094} {RNA1509_34081, RNA1509_52094, RNA815_57840}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA