TomoSeq data search

Data search

Results for MligTC455_43301

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43301	1085	22.60	Mlig455_013371	Neo: - Age: - Region-enriched R3: 1.193/0.02029	COL15A1	Mlig455_013371 {REF} {Length: 2507} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=81.8]; Collagen triple helix repeat (20 copies) [PF01391.20, score=27.7]} {Human: ENSG00000204291, COL15A1, collagen type XV alpha 1 chain, [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000001435, Col18a1, collagen, type XVIII, alpha 1, [Score=78.2, Expect=1e-14]} {Dmel: FBgn0260660, Mp, Multiplexin, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=77.8, Expect=5e-15]} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1310_8823.2, RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612, RNA815_3275.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43301

1085

22.60

Mlig455_013371

Neo: -

Age: -

Region-enriched R3: 1.193/0.02029

COL15A1

Mlig455_013371 {REF} {Length: 2507} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=81.8]; Collagen triple helix repeat (20 copies) [PF01391.20, score=27.7]} {Human: ENSG00000204291, COL15A1, collagen type XV alpha 1 chain, [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000001435, Col18a1, collagen, type XVIII, alpha 1, [Score=78.2, Expect=1e-14]} {Dmel: FBgn0260660, Mp, Multiplexin, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=77.8, Expect=5e-15]} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1310_8823.2, RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612, RNA815_3275.1}

Cumulative graph for MligTC455_43301

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.664	4.735	0.10420	0.67858
RegionR2	0.306	4.735	0.50518	0.88414
RegionR3	1.193	4.735	0.00061	0.02029
RegionR4	-0.213	4.735	0.61580	0.92637
RegionR5	-0.706	4.735	0.06140	0.21676
RegionR6	0.69	4.735	0.06089	0.46286
RegionR7	0.36	4.735	0.42700	1.00000
RegionR8	0.034	4.735	0.95310	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.341	4.735	0.82387	1.00000
RegenerationR2	-0.024	4.735	0.95369	1.00000
RegenerationR3	0.252	4.735	0.53839	0.87645
RegenerationR4	0.342	4.735	0.43328	0.83233
RegenerationR5	0.573	4.735	0.17565	0.60464
RegenerationR6	-0.313	4.735	0.45854	0.77635
RegenerationBL	-0.974	4.735	0.06348	0.29270
RegenerationTP	-0.019	4.735	0.97081	1.00000

Genes with expression patterns similar to MligTC455_43301

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43301	1085	22.6	Mlig455_013371	Neo: - Age: - Region-enriched R3: 1.193/0.02029	COL15A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013371 {REF} {Length: 2507} {Pfam: Collagenase NC10 and Endostatin [PF06482.13, score=81.8]; Collagen triple helix repeat (20 copies) [PF01391.20, score=27.7]} {Human: ENSG00000204291, COL15A1, collagen type XV alpha 1 chain, [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000001435, Col18a1, collagen, type XVIII, alpha 1, [Score=78.2, Expect=1e-14]} {Dmel: FBgn0260660, Mp, Multiplexin, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_6811_0_1, dd_Smed_v6_6811_0_1, [RH, Score=77.8, Expect=5e-15]} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1310_8823.2, RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612} {RNA1509_20865, RNA1509_26354, RNA1509_36504, RNA1509_43871, RNA1509_47612, RNA815_3275.1}
2.	MligTC455_26477	2173	45.28	Mlig455_023324	Neo: - Age: Up-Down-Down Region-enriched R3: 5.118/0.00000 Region-enriched R2: 3.488/0.00126 Regeneration-upregulated R5: 4.994 Regeneration-enriched R5: 4.994	CCDC80	0.957	-	-	-	0.957	-	-	Mlig455_023324 {REF} {Length: 24894} {Pfam: Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=24.1]} {Human: ENSG00000091986, CCDC80, coiled-coil domain containing 80, [Score=57.0, Expect=1e-06]; ENSG00000138759, FRAS1, Fraser extracellular matrix complex subunit 1, [Score=56.6, Expect=2e-06]; ENSG00000117983, MUC5B, mucin 5B, oligomeric mucus/gel-forming, [Score=56.2, Expect=3e-06]; ENSG00000188162, OTOG, otogelin, [Score=55.1, Expect=6e-06]; ENSG00000215182, MUC5AC, mucin 5AC, oligomeric mucus/gel-forming, [Score=54.3, Expect=1e-05]; ENSG00000283158, MUC5AC, mucin 5AC, oligomeric mucus/gel-forming, [Score=54.3, Expect=1e-05]} {Mouse: ENSMUSG00000048191, Muc6, mucin 6, gastric, [Score=86.3, Expect=2e-15]} {Dmel: FBgn0034294, Muc55B, Mucin 55B, [Score=59.3, Expect=8e-08]} {Smed: dd_Smed_v6_3185_0_1, dd_Smed_v6_3185_0_1, [RH, Score=259, Expect=1e-73]} {RNA1509_358, RNA1509_743} {RNA1310_29.1, RNA1509_358} {RNA1509_358, RNA815_53.1}
3.	MligTC455_31871	31	0.65	Mlig455_010813	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_010813 {REF} {Length: 2512} {NoTransDecoderORF} {RNA1509_46587} {RNA1310_48408.1} {RNA815_22207.1}
4.	MligTC455_26475	653	13.6	Mlig455_023246	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.894 Region-enriched R3: 3.795/0.00169		0.95	-	-	-	0.950	-	-	Mlig455_023246 {REF} {Length: 10042} {Dmel: FBgn0013733, shot, short stop, [Score=64.3, Expect=1e-09]} {Smed: dd_Smed_v6_8929_0_1, dd_Smed_v6_8929_0_1, [Score=57.0, Expect=7e-08]} {RNA1509_470} {RNA1310_29.1} {RNA815_622}