TomoSeq data search

Data search

Results for MligTC455_43311

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43311

1023

21.32

Mlig455_027500

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.245/0.04929

Mlig455_027500 {REF} {Length: 3738} {RNA1509_22550} {RNA1310_18946} {RNA815_17237}

Cumulative graph for MligTC455_43311

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.453	4.558	0.04766	0.51920
RegionR2	0.411	4.558	0.42112	0.81248
RegionR3	0.343	4.558	0.42579	0.94719
RegionR4	1.245	4.558	0.00752	0.04929
RegionR5	-0.299	4.558	0.49988	0.86298
RegionR6	0.683	4.558	0.11383	0.61595
RegionR7	0.225	4.558	0.67118	1.00000
RegionR8	-0.155	4.558	0.81560	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.066	4.558	0.97334	1.00000
RegenerationR2	0.616	4.558	0.15539	0.59159
RegenerationR3	0.322	4.558	0.50197	0.85789
RegenerationR4	-0.367	4.558	0.45224	0.84327
RegenerationR5	0.358	4.558	0.44608	0.82846
RegenerationR6	0.335	4.558	0.47107	0.78515
RegenerationBL	1.207	4.558	0.00728	0.08311
RegenerationTP	1.474	4.558	0.00350	0.09849

Genes with expression patterns similar to MligTC455_43311

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43311	1023	21.32	Mlig455_027500	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.245/0.04929		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027500 {REF} {Length: 3738} {RNA1509_22550} {RNA1310_18946} {RNA815_17237}
2.	MligTC455_22266	2059	42.91	Mlig455_005540	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.298	MXI1	0.965	-	-	-	-	-	0.965	Mlig455_005540 {REF} {Length: 3074} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=44.1]} {Human: ENSG00000119950, MXI1, MAX interactor 1, dimerization protein, [RH, Score=74.7, Expect=2e-14]} {Mouse: ENSMUSG00000025025, Mxi1, MAX interactor 1, dimerization protein, [RH, Score=74.7, Expect=1e-14]} {Dmel: FBgn0023215, Mnt, [RH, Score=65.9, Expect=2e-11]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [Score=50.8, Expect=5e-07]} {RNA1509_10091, RNA1509_22690, RNA1509_29689, RNA1509_9215} {RNA1310_25464, RNA1509_22690, RNA1509_29689, RNA1509_9215} {RNA1509_22690, RNA1509_29689, RNA1509_9215, RNA815_10848.1}
3.	MligTC455_15480	993	20.69	Mlig455_044925, Mlig455_055524	Neo: - Age: Down-Up-Down	C1GALT1	0.961	-	-	-	-	0.961	-	Mlig455_044925 {REF} {Length: 2812} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=28.9]; Fringe-like [PF02434.18, score=27.5]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=231, Expect=4e-73]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=229, Expect=2e-72]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=220, Expect=7e-69]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=233, Expect=4e-74]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=229, Expect=7e-73]} {RNA1509_16032} {RNA1310_4845} {RNA815_6807.1} Mlig455_055524 {REF} {Length: 3113} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=28.5]; Fringe-like [PF02434.18, score=27.1]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=255, Expect=4e-82]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=252, Expect=3e-81]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=250, Expect=3e-80]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=259, Expect=7e-84]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=262, Expect=2e-85]} {RNA1509_16032, RNA1509_16761, RNA1509_26187, RNA1509_46303} {RNA1310_4845, RNA1509_16761, RNA1509_26187, RNA1509_46303} {RNA1509_16761, RNA1509_26187, RNA1509_46303, RNA815_6807.1}
4.	MligTC455_45690	2497	52.02	Mlig455_051204	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.586 Region-enriched R7: 1.072/0.04886		0.961	-	-	-	-	0.961	-	Mlig455_051204 {REF} {Length: 1686} {RNA1509_29397} {RNA1310_21586, RNA1509_29397} {RNA1509_29397, RNA815_10734.1}
5.	MligTC455_04962	403	8.39	Mlig455_019967	Neo: - Age: logFC(26M/2M)=0.613 Region-enriched R2: 2.312/0.00157		0.954	-	-	-	-	0.954	-	Mlig455_019967 {REF} {Length: 1521} {NoTransDecoderORF} {RNA1509_33474, RNA1509_51437} {RNA1310_22931.1, RNA1509_33474, RNA1509_51437} {RNA1509_33474, RNA1509_51437, RNA815_20387.1}
6.	MligTC455_45360	1932	40.26	Mlig455_064107	Neo: - Age: - Regeneration-downregulated BL: -1.554 Regeneration-depleted BL: -1.554		0.954	-	-	-	-	-	0.954	Mlig455_064107 {REF} {Length: 1422} {RNA1509_24661} {RNA1310_24377.1} {RNA815_11772.1}
7.	MligTC455_30265	720	14.99	Mlig455_014549, Mlig455_036942	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.640		0.953	-	-	-	-	0.953	-	Mlig455_014549 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384} Mlig455_036942 {REF} {Length: 1343} {RNA1509_45000} {RNA1310_32524} {RNA815_26384}
8.	MligTC455_27299	1310	27.3	Mlig455_030624	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_030624 {REF} {Length: 1599} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=175, Expect=9e-55]} {RNA1509_6286} {RNA1310_20686, RNA1509_6286} {RNA1509_6286, RNA815_9356.1}

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