TomoSeq data search

Data search

Results for MligTC455_45360

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45360

1932

40.26

Mlig455_064107

Neo: -

Age: -

Regeneration-downregulated BL: -1.554

Regeneration-depleted BL: -1.554

Mlig455_064107 {REF} {Length: 1422} {RNA1509_24661} {RNA1310_24377.1} {RNA815_11772.1}

Cumulative graph for MligTC455_45360

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.429	5.463	0.06639	0.58211
RegionR2	-0.155	5.463	0.62347	0.96621
RegionR3	-0.206	5.463	0.45232	0.96353
RegionR4	0.207	5.463	0.50501	0.83151
RegionR5	-0.729	5.463	0.00928	0.05473
RegionR6	0.631	5.463	0.01430	0.20849
RegionR7	0.63	5.463	0.04202	0.39379
RegionR8	1.05	5.463	0.00422	0.11349

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.309	5.463	0.80010	1.00000
RegenerationR2	0.175	5.463	0.52784	0.88311
RegenerationR3	-0.151	5.463	0.61820	0.91582
RegenerationR4	-0.125	5.463	0.67742	0.94482
RegenerationR5	0.301	5.463	0.30960	0.73589
RegenerationR6	-0.004	5.463	0.98662	1.00000
RegenerationBL	-1.554	5.463	0.00001	0.00067	Specific for BL: -1.554
RegenerationTP	-0.018	5.463	0.95315	1.00000

Genes with expression patterns similar to MligTC455_45360

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45360	1932	40.26	Mlig455_064107	Neo: - Age: - Regeneration-downregulated BL: -1.554 Regeneration-depleted BL: -1.554		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064107 {REF} {Length: 1422} {RNA1509_24661} {RNA1310_24377.1} {RNA815_11772.1}
2.	MligTC455_47865	886	18.45	Mlig455_046549	Neo: - Age: - Regeneration-upregulated R4: 1.754 Regeneration-enriched R4: 1.754		0.96	-	-	-	0.960	-	-	Mlig455_046549 {REF} {Length: 1868} {RNA1509_15750} {RNA1310_27861} {RNA815_12195}
3.	MligTC455_43311	1023	21.32	Mlig455_027500	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.245/0.04929		0.954	-	-	-	-	-	0.954	Mlig455_027500 {REF} {Length: 3738} {RNA1509_22550} {RNA1310_18946} {RNA815_17237}
4.	MligTC455_34125	556	11.58	Mlig455_049354	Neo: - Age: -	MPDZ	0.952	-	-	-	-	-	0.952	Mlig455_049354 {REF} {Length: 8195} {Pfam: PDZ domain [PF00595.26, score=481.5]; PDZ domain [PF17820.3, score=245.9]; PDZ domain [PF13180.8, score=160.6]; Family of unknown function (DUF6288) [PF19805.1, score=27.8]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [RH, Score=312, Expect=6e-85]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [RH, Score=308, Expect=8e-84]} {Dmel: FBgn0067864, Patj, [Score=244, Expect=1e-66]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=210, Expect=6e-54]} {Smed: dd_Smed_v6_5376_0_2, dd_Smed_v6_5376_0_2, [RH, Score=379, Expect=7e-106]} {RNA1509_52171} {RNA1310_2164} {RNA815_9270}
5.	MligTC455_49476	659	13.73	Mlig455_000841	Neo: - Age: -	SCARB1	0.952	-	-	-	-	-	0.952	Mlig455_000841 {REF} {Length: 3878} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=347.0]} {Human: ENSG00000073060, SCARB1, scavenger receptor class B member 1, [Score=203, Expect=3e-58]; ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=202, Expect=4e-58]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=204, Expect=6e-59]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=179, Expect=1e-49]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [Score=143, Expect=1e-36]} {Smed: dd_Smed_v6_2951_0_1, dd_Smed_v6_2951_0_1, [Score=261, Expect=2e-80]} {RNA1509_12751} {RNA1310_8968, RNA1509_12751} {RNA1509_12751, RNA815_8533.1}
6.	MligTC455_49477	647	13.47	Mlig455_057155	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.602		0.952	-	-	-	-	-	0.952	Mlig455_057155 {REF} {Length: 1603} {Pfam: CD36 family [PF01130.23, score=35.1]} {RNA1509_12751} {RNA1310_21707.1} {RNA815_6814}

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