TomoSeq data search

Data search

Results for MligTC455_43466

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43466	1626	33.87	Mlig455_044692, Mlig455_044700	Neo: - Age: - Region-enriched R4: 1.343/0.00118	HERPUD1, HERPUD2	Mlig455_044692 {REF} {Length: 2042} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]; IrrE N-terminal-like domain [PF06114.15, score=19.7]} {Human: ENSG00000051108, HERPUD1, homocysteine inducible ER protein with ubiquitin like domain 1, [RH, Score=69.7, Expect=7e-13]; ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000008429, Herpud2, HERPUD family member 2, [RH, Score=69.3, Expect=1e-12]; ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1310_13415.1, RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189, RNA815_20785} Mlig455_044700 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=28.8]} {Human: ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=67.0, Expect=6e-12]} {Mouse: ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=68.2, Expect=2e-12]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=54.7, Expect=5e-08]} {Celegans: WBGene00009112, tag-353, [RH, Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_27988, RNA1509_33573} {RNA1310_13415.2, RNA1509_27988, RNA1509_33573} {RNA1509_27988, RNA1509_33573, RNA815_26170}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43466

1626

33.87

Mlig455_044692, Mlig455_044700

Neo: -

Age: -

Region-enriched R4: 1.343/0.00118

HERPUD1, HERPUD2

Mlig455_044692 {REF} {Length: 2042} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]; IrrE N-terminal-like domain [PF06114.15, score=19.7]} {Human: ENSG00000051108, HERPUD1, homocysteine inducible ER protein with ubiquitin like domain 1, [RH, Score=69.7, Expect=7e-13]; ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000008429, Herpud2, HERPUD family member 2, [RH, Score=69.3, Expect=1e-12]; ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1310_13415.1, RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189, RNA815_20785}

Mlig455_044700 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=28.8]} {Human: ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=67.0, Expect=6e-12]} {Mouse: ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=68.2, Expect=2e-12]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=54.7, Expect=5e-08]} {Celegans: WBGene00009112, tag-353, [RH, Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_27988, RNA1509_33573} {RNA1310_13415.2, RNA1509_27988, RNA1509_33573} {RNA1509_27988, RNA1509_33573, RNA815_26170}

Cumulative graph for MligTC455_43466

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.602	5.341	0.06774	0.58608
RegionR2	0.049	5.341	0.89174	1.00000
RegionR3	0.42	5.341	0.15929	0.67561
RegionR4	1.343	5.341	0.00007	0.00118
RegionR5	0.214	5.341	0.45418	0.81612
RegionR6	0.094	5.341	0.76170	1.00000
RegionR7	0.192	5.341	0.58406	1.00000
RegionR8	-0.709	5.341	0.14323	0.69115

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.655	5.341	0.36389	1.00000
RegenerationR2	-0.322	5.341	0.31623	0.75480
RegenerationR3	-0.234	5.341	0.49296	0.85506
RegenerationR4	-0.893	5.341	0.01045	0.15505
RegenerationR5	-0.053	5.341	0.87226	1.00000
RegenerationR6	0.022	5.341	0.95028	1.00000
RegenerationBL	0.356	5.341	0.33211	0.69872
RegenerationTP	0.887	5.341	0.02601	0.27199

Genes with expression patterns similar to MligTC455_43466

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43466	1626	33.87	Mlig455_044692, Mlig455_044700	Neo: - Age: - Region-enriched R4: 1.343/0.00118	HERPUD1, HERPUD2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044692 {REF} {Length: 2042} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]; IrrE N-terminal-like domain [PF06114.15, score=19.7]} {Human: ENSG00000051108, HERPUD1, homocysteine inducible ER protein with ubiquitin like domain 1, [RH, Score=69.7, Expect=7e-13]; ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000008429, Herpud2, HERPUD family member 2, [RH, Score=69.3, Expect=1e-12]; ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1310_13415.1, RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189, RNA815_20785} Mlig455_044700 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=28.8]} {Human: ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=67.0, Expect=6e-12]} {Mouse: ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=68.2, Expect=2e-12]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=54.7, Expect=5e-08]} {Celegans: WBGene00009112, tag-353, [RH, Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_27988, RNA1509_33573} {RNA1310_13415.2, RNA1509_27988, RNA1509_33573} {RNA1509_27988, RNA1509_33573, RNA815_26170}
2.	MligTC455_49387	581	12.1	Mlig455_006018	Neo: - Age: Down-Up-Down Region-enriched R5: 1.165/0.00114		0.972	-	-	-	0.972	-	-	Mlig455_006018 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_20057, RNA1509_42322, RNA1509_57412} {RNA1310_13070.1, RNA1509_42322, RNA1509_57412} {RNA1509_42322, RNA1509_57412, RNA815_13084}
3.	MligTC455_19566	3548	73.91	Mlig455_033783, Mlig455_033832	Neo: - Age: - Region-enriched R4: 1.109/0.00374	TWF2	0.96	-	-	-	-	-	0.960	Mlig455_033783 {REF} {Length: 2610} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=104.4]} {Human: ENSG00000247596, TWF2, twinfilin actin binding protein 2, [RH, Score=268, Expect=2e-87]; ENSG00000151239, TWF1, twinfilin actin binding protein 1, [RH, Score=261, Expect=1e-84]} {Mouse: ENSMUSG00000023277, Twf2, twinfilin actin binding protein 2, [RH, Score=269, Expect=4e-88]} {Dmel: FBgn0038206, twf, twinfilin, [RH, Score=255, Expect=5e-83]} {Celegans: WBGene00018187, F38E9.5, [RH, Score=186, Expect=3e-56]} {Smed: dd_Smed_v6_2563_0_1, dd_Smed_v6_2563_0_1, [RH, Score=233, Expect=2e-74]} {RNA1509_8831} {RNA1310_23613} {RNA815_10116} Mlig455_033832 {REF} {Length: 2620} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=104.4]} {Human: ENSG00000247596, TWF2, twinfilin actin binding protein 2, [RH, Score=268, Expect=2e-87]; ENSG00000151239, TWF1, twinfilin actin binding protein 1, [RH, Score=261, Expect=1e-84]} {Mouse: ENSMUSG00000023277, Twf2, twinfilin actin binding protein 2, [RH, Score=269, Expect=4e-88]} {Dmel: FBgn0038206, twf, twinfilin, [RH, Score=255, Expect=5e-83]} {Celegans: WBGene00018187, F38E9.5, [RH, Score=186, Expect=3e-56]} {Smed: dd_Smed_v6_2563_0_1, dd_Smed_v6_2563_0_1, [RH, Score=233, Expect=2e-74]} {RNA1509_8831} {RNA1310_23613, RNA1509_8831} {RNA1509_8831, RNA815_10116}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43466

1626

33.87

Mlig455_044692, Mlig455_044700

Neo: -

Age: -

Region-enriched R4: 1.343/0.00118

HERPUD1, HERPUD2

1.000

MligTC455_49387

581

12.1

Mlig455_006018

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.165/0.00114

0.972

Mlig455_006018 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_20057, RNA1509_42322, RNA1509_57412} {RNA1310_13070.1, RNA1509_42322, RNA1509_57412} {RNA1509_42322, RNA1509_57412, RNA815_13084}

MligTC455_19566

3548

73.91

Mlig455_033783, Mlig455_033832

Neo: -

Age: -

Region-enriched R4: 1.109/0.00374

TWF2

0.96

0.960

Mlig455_033783 {REF} {Length: 2610} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=104.4]} {Human: ENSG00000247596, TWF2, twinfilin actin binding protein 2, [RH, Score=268, Expect=2e-87]; ENSG00000151239, TWF1, twinfilin actin binding protein 1, [RH, Score=261, Expect=1e-84]} {Mouse: ENSMUSG00000023277, Twf2, twinfilin actin binding protein 2, [RH, Score=269, Expect=4e-88]} {Dmel: FBgn0038206, twf, twinfilin, [RH, Score=255, Expect=5e-83]} {Celegans: WBGene00018187, F38E9.5, [RH, Score=186, Expect=3e-56]} {Smed: dd_Smed_v6_2563_0_1, dd_Smed_v6_2563_0_1, [RH, Score=233, Expect=2e-74]} {RNA1509_8831} {RNA1310_23613} {RNA815_10116}

Mlig455_033832 {REF} {Length: 2620} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=104.4]} {Human: ENSG00000247596, TWF2, twinfilin actin binding protein 2, [RH, Score=268, Expect=2e-87]; ENSG00000151239, TWF1, twinfilin actin binding protein 1, [RH, Score=261, Expect=1e-84]} {Mouse: ENSMUSG00000023277, Twf2, twinfilin actin binding protein 2, [RH, Score=269, Expect=4e-88]} {Dmel: FBgn0038206, twf, twinfilin, [RH, Score=255, Expect=5e-83]} {Celegans: WBGene00018187, F38E9.5, [RH, Score=186, Expect=3e-56]} {Smed: dd_Smed_v6_2563_0_1, dd_Smed_v6_2563_0_1, [RH, Score=233, Expect=2e-74]} {RNA1509_8831} {RNA1310_23613, RNA1509_8831} {RNA1509_8831, RNA815_10116}