TomoSeq data search

Data search

Results for MligTC455_49387

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49387	581	12.10	Mlig455_006018	Neo: - Age: Down-Up-Down Region-enriched R5: 1.165/0.00114		Mlig455_006018 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_20057, RNA1509_42322, RNA1509_57412} {RNA1310_13070.1, RNA1509_42322, RNA1509_57412} {RNA1509_42322, RNA1509_57412, RNA815_13084}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_49387

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.287	3.818	0.74950	1.00000
RegionR2	-0.179	3.818	0.69311	1.00000
RegionR3	-0.332	3.818	0.37083	0.90550
RegionR4	-0.374	3.818	0.35071	0.67221
RegionR5	1.165	3.818	0.00006	0.00114
RegionR6	0.491	3.818	0.16325	0.71766
RegionR7	-0.201	3.818	0.67888	1.00000
RegionR8	-0.282	3.818	0.63101	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.362	3.818	0.04848	0.69196
RegenerationR2	0.2	3.818	0.59697	0.91442
RegenerationR3	0.494	3.818	0.23288	0.66732
RegenerationR4	-0.162	3.818	0.69835	0.95279
RegenerationR5	-0.773	3.818	0.02354	0.26341
RegenerationR6	0.006	3.818	0.98831	1.00000
RegenerationBL	-1.078	3.818	0.08146	0.33358
RegenerationTP	0.57	3.818	0.28410	0.73106

Genes with expression patterns similar to MligTC455_49387

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49387	581	12.1	Mlig455_006018	Neo: - Age: Down-Up-Down Region-enriched R5: 1.165/0.00114		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006018 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_20057, RNA1509_42322, RNA1509_57412} {RNA1310_13070.1, RNA1509_42322, RNA1509_57412} {RNA1509_42322, RNA1509_57412, RNA815_13084}
2.	MligTC455_43466	1626	33.87	Mlig455_044692, Mlig455_044700	Neo: - Age: - Region-enriched R4: 1.343/0.00118	HERPUD1, HERPUD2	0.972	-	-	-	0.972	-	-	Mlig455_044692 {REF} {Length: 2042} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]; IrrE N-terminal-like domain [PF06114.15, score=19.7]} {Human: ENSG00000051108, HERPUD1, homocysteine inducible ER protein with ubiquitin like domain 1, [RH, Score=69.7, Expect=7e-13]; ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000008429, Herpud2, HERPUD family member 2, [RH, Score=69.3, Expect=1e-12]; ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1310_13415.1, RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189, RNA815_20785} Mlig455_044700 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=28.8]} {Human: ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=67.0, Expect=6e-12]} {Mouse: ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=68.2, Expect=2e-12]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=54.7, Expect=5e-08]} {Celegans: WBGene00009112, tag-353, [RH, Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_27988, RNA1509_33573} {RNA1310_13415.2, RNA1509_27988, RNA1509_33573} {RNA1509_27988, RNA1509_33573, RNA815_26170}
3.	MligTC455_29148	351	7.31	Mlig455_006975	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.502		0.952	-	-	-	0.952	-	-	Mlig455_006975 {REF} {Length: 2167} {RNA1310_27903} {RNA815_7705.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49387

581

12.1

Mlig455_006018

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.165/0.00114

1.000

Mlig455_006018 {REF} {Length: 2130} {TRANSSPLICED} {RNA1509_20057, RNA1509_42322, RNA1509_57412} {RNA1310_13070.1, RNA1509_42322, RNA1509_57412} {RNA1509_42322, RNA1509_57412, RNA815_13084}

MligTC455_43466

1626

33.87

Mlig455_044692, Mlig455_044700

Neo: -

Age: -

Region-enriched R4: 1.343/0.00118

HERPUD1, HERPUD2

0.972

Mlig455_044692 {REF} {Length: 2042} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]; IrrE N-terminal-like domain [PF06114.15, score=19.7]} {Human: ENSG00000051108, HERPUD1, homocysteine inducible ER protein with ubiquitin like domain 1, [RH, Score=69.7, Expect=7e-13]; ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=68.9, Expect=2e-12]} {Mouse: ENSMUSG00000008429, Herpud2, HERPUD family member 2, [RH, Score=69.3, Expect=1e-12]; ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=65.9, Expect=1e-11]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1310_13415.1, RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189} {RNA1509_40646, RNA1509_47913, RNA1509_51424, RNA1509_55189, RNA815_20785}

Mlig455_044700 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=28.8]} {Human: ENSG00000122557, HERPUD2, HERPUD family member 2, [RH, Score=67.0, Expect=6e-12]} {Mouse: ENSMUSG00000031770, Herpud1, homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1, [RH, Score=68.2, Expect=2e-12]} {Dmel: FBgn0031950, Herp, Homocysteine-induced endoplasmic reticulum protein, [RH, Score=54.7, Expect=5e-08]} {Celegans: WBGene00009112, tag-353, [RH, Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_774_0_1, dd_Smed_v6_774_0_1, [Score=78.6, Expect=3e-16]} {RNA1509_27988, RNA1509_33573} {RNA1310_13415.2, RNA1509_27988, RNA1509_33573} {RNA1509_27988, RNA1509_33573, RNA815_26170}

MligTC455_29148

351

7.31

Mlig455_006975

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.502

0.952

Mlig455_006975 {REF} {Length: 2167} {RNA1310_27903} {RNA815_7705.1}