TomoSeq data search

Data search

Results for MligTC455_43596

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43596

10129

211.02

Mlig455_035999, Mlig455_036077, Mlig455_036101

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.148/0.00001

PGRMC2

Mlig455_035999 {REF} {Length: 506} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=107, Expect=1e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=107, Expect=1e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=86.3, Expect=3e-22]} {Celegans: WBGene00006890, vem-1, [Score=52.4, Expect=8e-10]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=83.2, Expect=1e-21]} {RNA1509_9081} {RNA1310_34181.2, RNA1509_9081} {RNA1509_9081, RNA815_19498}

Mlig455_036077 {REF} {Length: 512} {TRANSSPLICED} {Pfam: Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=47.1]} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=158, Expect=1e-48]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=159, Expect=5e-49]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=159, Expect=4e-49]} {Celegans: WBGene00006890, vem-1, [RH, Score=101, Expect=3e-27]} {Smed: dd_Smed_v6_2076_0_1, dd_Smed_v6_2076_0_1, [Score=132, Expect=2e-39]} {RNA1509_26318, RNA1509_29023} {RNA1310_34181.1, RNA1509_26318} {RNA1509_26318, RNA815_19498}

Mlig455_036101 {REF} {Length: 505} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=105, Expect=6e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=106, Expect=4e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=87.8, Expect=9e-23]} {Celegans: WBGene00006890, vem-1, [Score=50.8, Expect=4e-09]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=84.7, Expect=3e-22]} {RNA1509_39652} {RNA1310_34181.1} {RNA815_19498}

Cumulative graph for MligTC455_43596

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.565	7.871	0.00024	0.05199
RegionR2	-0.083	7.871	0.73749	1.00000
RegionR3	0.304	7.871	0.13581	0.63062
RegionR4	1.148	7.871	0.00000	0.00001
RegionR5	0.94	7.871	0.00000	0.00003
RegionR6	0.66	7.871	0.00108	0.04057
RegionR7	-0.514	7.871	0.02497	0.29686
RegionR8	-0.889	7.871	0.00099	0.04618

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.559	7.871	0.03355	0.64391
RegenerationR2	0.055	7.871	0.82229	0.99562
RegenerationR3	0.19	7.871	0.45853	0.83700
RegenerationR4	-0.11	7.871	0.67285	0.94343
RegenerationR5	0.165	7.871	0.50987	0.86389
RegenerationR6	-0.123	7.871	0.62807	0.88558
RegenerationBL	-0.036	7.871	0.88084	1.00000
RegenerationTP	0.802	7.871	0.00185	0.06869

Genes with expression patterns similar to MligTC455_43596

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43596	10129	211.02	Mlig455_035999, Mlig455_036077, Mlig455_036101	Neo: - Age: Down-Up-Up Region-enriched R4: 1.148/0.00001	PGRMC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035999 {REF} {Length: 506} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=107, Expect=1e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=107, Expect=1e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=86.3, Expect=3e-22]} {Celegans: WBGene00006890, vem-1, [Score=52.4, Expect=8e-10]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=83.2, Expect=1e-21]} {RNA1509_9081} {RNA1310_34181.2, RNA1509_9081} {RNA1509_9081, RNA815_19498} Mlig455_036077 {REF} {Length: 512} {TRANSSPLICED} {Pfam: Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=47.1]} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=158, Expect=1e-48]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=159, Expect=5e-49]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=159, Expect=4e-49]} {Celegans: WBGene00006890, vem-1, [RH, Score=101, Expect=3e-27]} {Smed: dd_Smed_v6_2076_0_1, dd_Smed_v6_2076_0_1, [Score=132, Expect=2e-39]} {RNA1509_26318, RNA1509_29023} {RNA1310_34181.1, RNA1509_26318} {RNA1509_26318, RNA815_19498} Mlig455_036101 {REF} {Length: 505} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=105, Expect=6e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=106, Expect=4e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=87.8, Expect=9e-23]} {Celegans: WBGene00006890, vem-1, [Score=50.8, Expect=4e-09]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=84.7, Expect=3e-22]} {RNA1509_39652} {RNA1310_34181.1} {RNA815_19498}
2.	MligTC455_37083	4746	98.86	Mlig455_037676	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.226 Regeneration-enriched R6: 1.134 Regeneration-enriched BL: 1.123 Regeneration-enriched TP: 1.094	PSMB1	0.972	-	-	-	-	0.972	-	Mlig455_037676 {REF} {Length: 1239} {Pfam: Proteasome subunit [PF00227.28, score=99.3]} {Human: ENSG00000008018, PSMB1, proteasome subunit beta 1, [RH, Score=222, Expect=1e-72]} {Mouse: ENSMUSG00000014769, Psmb1, proteasome (prosome, macropain) subunit, beta type 1, [RH, Score=222, Expect=1e-72]} {Dmel: FBgn0002284, Prosbeta6, Proteasome beta6 subunit, [RH, Score=216, Expect=2e-70]} {Celegans: WBGene00003952, pbs-6, Proteasome subunit beta type-1, [RH, Score=143, Expect=5e-42]} {Smed: dd_Smed_v6_1771_0_1, dd_Smed_v6_1771_0_1, [RH, Score=252, Expect=4e-85]} {RNA1509_11284, RNA1509_19219, RNA1509_19926} {RNA1310_26414.2, RNA1509_11284, RNA1509_19219, RNA1509_19926} {RNA1509_11284, RNA1509_19219, RNA1509_19926, RNA815_13246.1}
3.	MligTC455_34034	797	16.61	Mlig455_032290, Mlig455_068477	Neo: - Age: -	GATA3	0.957	-	-	-	-	0.957	-	Mlig455_032290 {REF} {Length: 2855} {Pfam: GATA zinc finger [PF00320.29, score=103.9]; TFIIB zinc-binding [PF08271.14, score=23.5]} {Human: ENSG00000107485, GATA3, GATA binding protein 3, [RH, Score=213, Expect=2e-61]; ENSG00000179348, GATA2, GATA binding protein 2, [RH, Score=211, Expect=3e-60]; ENSG00000285109, GATA4, GATA binding protein 4, [RH, Score=203, Expect=9e-58]; ENSG00000136574, GATA4, GATA binding protein 4, [RH, Score=203, Expect=9e-58]} {Mouse: ENSMUSG00000015619, Gata3, GATA binding protein 3, [RH, Score=213, Expect=1e-61]; ENSMUSG00000015053, Gata2, GATA binding protein 2, [RH, Score=211, Expect=2e-60]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [RH, Score=203, Expect=5e-58]} {Dmel: FBgn0003117, pnr, pannier, [RH, Score=211, Expect=4e-60]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [RH, Score=204, Expect=2e-58]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [RH, Score=226, Expect=3e-67]} {RNA1509_33133} {RNA1310_21765.1} {RNA815_13347} Mlig455_068477 {REF} {Length: 2995} {Pfam: GATA zinc finger [PF00320.29, score=104.2]; TFIIB zinc-binding [PF08271.14, score=23.9]} {Human: ENSG00000107485, GATA3, GATA binding protein 3, [RH, Score=212, Expect=2e-61]; ENSG00000179348, GATA2, GATA binding protein 2, [RH, Score=209, Expect=3e-60]; ENSG00000285109, GATA4, GATA binding protein 4, [RH, Score=202, Expect=8e-58]; ENSG00000136574, GATA4, GATA binding protein 4, [RH, Score=202, Expect=8e-58]} {Mouse: ENSMUSG00000015619, Gata3, GATA binding protein 3, [RH, Score=212, Expect=1e-61]; ENSMUSG00000015053, Gata2, GATA binding protein 2, [RH, Score=209, Expect=2e-60]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [RH, Score=202, Expect=5e-58]} {Dmel: FBgn0003117, pnr, pannier, [RH, Score=209, Expect=4e-60]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [RH, Score=205, Expect=4e-59]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [RH, Score=225, Expect=3e-67]} {RNA1509_33133} {RNA1310_23565} {RNA815_13347}
4.	MligTC455_18120	1732	36.09	Mlig455_028478, Mlig455_028503	Neo: - Age: - Regeneration-upregulated BL: 1.769 Regeneration-enriched BL: 1.769	CHID1	0.951	-	-	-	-	0.951	-	Mlig455_028478 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=68.6]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=322, Expect=3e-107]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=328, Expect=6e-110]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=203, Expect=9e-62]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_36132} {RNA1310_15503} {RNA815_6271.1} Mlig455_028503 {REF} {Length: 1790} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=67.1]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=325, Expect=2e-108]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=332, Expect=3e-111]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=201, Expect=4e-61]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_25390, RNA1509_36132} {RNA1310_15503, RNA1509_25390, RNA1509_36132} {RNA1509_25390, RNA1509_36132, RNA815_6271.1}
5.	MligTC455_19822	3544	73.84	Mlig455_008873	Neo: Int S/G2/M Age: logFC(26M/2M)=0.482 Region-enriched R4: 3.779/0.00010 Region-enriched R5: 1.756/0.04283	RPL7A	0.951	-	-	-	-	0.951	-	Mlig455_008873 {REF} {Length: 968} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_274, RNA1509_31815, RNA1509_695} {RNA1310_38447, RNA1509_31815, RNA1509_695} {RNA1509_31815, RNA1509_695, RNA815_17072}
6.	MligTC455_44174	1415	29.48	Mlig455_020249	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.184	COPS2	0.951	-	-	-	-	-	0.951	Mlig455_020249 {REF} {Length: 1468} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=89.3]} {Human: ENSG00000166200, COPS2, COP9 signalosome subunit 2, [RH, Score=609, Expect=0.0]} {Mouse: ENSMUSG00000027206, Cops2, COP9 signalosome subunit 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0013746, alien, [RH, Score=600, Expect=0.0]} {Celegans: WBGene00000814, csn-2, COP9 signalosome complex subunit 2, [RH, Score=499, Expect=5e-175]} {Smed: dd_Smed_v6_4989_0_1, dd_Smed_v6_4989_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_3260} {RNA1310_22322.1, RNA1509_3260} {RNA1509_3260, RNA815_9234}

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