TomoSeq data search

Data search

Results for MligTC455_18120

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18120

1732

36.09

Mlig455_028478, Mlig455_028503

Neo: -

Age: -

Regeneration-upregulated BL: 1.769

Regeneration-enriched BL: 1.769

CHID1

Mlig455_028478 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=68.6]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=322, Expect=3e-107]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=328, Expect=6e-110]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=203, Expect=9e-62]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_36132} {RNA1310_15503} {RNA815_6271.1}

Mlig455_028503 {REF} {Length: 1790} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=67.1]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=325, Expect=2e-108]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=332, Expect=3e-111]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=201, Expect=4e-61]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_25390, RNA1509_36132} {RNA1310_15503, RNA1509_25390, RNA1509_36132} {RNA1509_25390, RNA1509_36132, RNA815_6271.1}

Cumulative graph for MligTC455_18120

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.043	5.369	0.22729	0.87132
RegionR2	0.394	5.369	0.30996	0.70095
RegionR3	0.329	5.369	0.31328	0.85257
RegionR4	0.67	5.369	0.06433	0.22852
RegionR5	0.773	5.369	0.00953	0.05566
RegionR6	-0.208	5.369	0.55759	1.00000
RegionR7	-0.191	5.369	0.66268	1.00000
RegionR8	-0.724	5.369	0.21346	0.81762

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.202	5.369	0.87072	1.00000
RegenerationR2	-0.241	5.369	0.48689	0.86626
RegenerationR3	0.313	5.369	0.39359	0.79860
RegenerationR4	0.357	5.369	0.33231	0.76607
RegenerationR5	0.547	5.369	0.11006	0.50177
RegenerationR6	1.31	5.369	0.00050	0.02332
RegenerationBL	1.769	5.369	0.00000	0.00021	Specific for BL: 1.769
RegenerationTP	1.07	5.369	0.01727	0.22516

Genes with expression patterns similar to MligTC455_18120

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18120	1732	36.09	Mlig455_028478, Mlig455_028503	Neo: - Age: - Regeneration-upregulated BL: 1.769 Regeneration-enriched BL: 1.769	CHID1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028478 {REF} {Length: 1794} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=68.6]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=322, Expect=3e-107]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=328, Expect=6e-110]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=203, Expect=9e-62]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_36132} {RNA1310_15503} {RNA815_6271.1} Mlig455_028503 {REF} {Length: 1790} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 18 [PF00704.30, score=67.1]} {Human: ENSG00000177830, CHID1, chitinase domain containing 1, [RH, Score=325, Expect=2e-108]} {Mouse: ENSMUSG00000025512, Chid1, chitinase domain containing 1, [RH, Score=332, Expect=3e-111]} {Dmel: FBgn0031996, CG8460, [RH, Score=258, Expect=1e-82]} {Celegans: WBGene00016642, chil-10, CHItinase-Like, [RH, Score=201, Expect=4e-61]} {Smed: dd_Smed_v6_7265_0_1, dd_Smed_v6_7265_0_1, [RH, Score=289, Expect=8e-95]} {RNA1509_25390, RNA1509_36132} {RNA1310_15503, RNA1509_25390, RNA1509_36132} {RNA1509_25390, RNA1509_36132, RNA815_6271.1}
2.	MligTC455_37083	4746	98.86	Mlig455_037676	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.226 Regeneration-enriched R6: 1.134 Regeneration-enriched BL: 1.123 Regeneration-enriched TP: 1.094	PSMB1	1.78	-	-	-	-	0.961	0.819	Mlig455_037676 {REF} {Length: 1239} {Pfam: Proteasome subunit [PF00227.28, score=99.3]} {Human: ENSG00000008018, PSMB1, proteasome subunit beta 1, [RH, Score=222, Expect=1e-72]} {Mouse: ENSMUSG00000014769, Psmb1, proteasome (prosome, macropain) subunit, beta type 1, [RH, Score=222, Expect=1e-72]} {Dmel: FBgn0002284, Prosbeta6, Proteasome beta6 subunit, [RH, Score=216, Expect=2e-70]} {Celegans: WBGene00003952, pbs-6, Proteasome subunit beta type-1, [RH, Score=143, Expect=5e-42]} {Smed: dd_Smed_v6_1771_0_1, dd_Smed_v6_1771_0_1, [RH, Score=252, Expect=4e-85]} {RNA1509_11284, RNA1509_19219, RNA1509_19926} {RNA1310_26414.2, RNA1509_11284, RNA1509_19219, RNA1509_19926} {RNA1509_11284, RNA1509_19219, RNA1509_19926, RNA815_13246.1}
3.	MligTC455_21933	104	2.17	Mlig455_033294	Neo: - Age: -	SLC22A6	1.753	0.951	-	0.802	-	-	-	Mlig455_033294 {REF} {Length: 4179} {Pfam: Sugar (and other) transporter [PF00083.26, score=70.8]; Major Facilitator Superfamily [PF07690.18, score=57.7]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=129, Expect=7e-32]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=120, Expect=7e-29]} {Dmel: FBgn0038407, CG6126, [Score=143, Expect=4e-37]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=132, Expect=1e-33]} {RNA1509_33980, RNA1509_37698, RNA1509_53707} {RNA1310_11575, RNA1509_33980, RNA1509_37698, RNA1509_53707} {RNA1509_33980, RNA1509_37698, RNA1509_53707, RNA815_20135}
4.	MligTC455_30117	2604	54.25	Mlig455_013959, Mlig455_019121, Mlig455_043815, Mlig455_058653	Neo: - Age: logFC(26M/2M)=1.138 Region-enriched R5: 1.583/0.00000 Regeneration-upregulated BL: 1.433 Regeneration-enriched BL: 1.433		1.714	-	-	0.761	0.953	-	-	Mlig455_013959 {REF} {Length: 2658} {Pfam: Protein of unknown function (DUF2759) [PF10958.10, score=18.2]} {RNA1509_23205} {RNA1310_58264} {RNA815_16209.1} Mlig455_019121 {REF} {Length: 335} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_043815 {REF} {Length: 292} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_058653 {REF} {Length: 3990} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}
5.	MligTC455_20188	551	11.48	Mlig455_006185	Neo: - Age: -	ANO2	1.683	-	-	0.733	0.950	-	-	Mlig455_006185 {REF} {Length: 6166} {Pfam: Calcium-activated chloride channel [PF04547.14, score=497.2]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=103.9]} {Human: ENSG00000047617, ANO2, anoctamin 2, [RH, Score=535, Expect=2e-174]; ENSG00000131620, ANO1, anoctamin 1, [RH, Score=510, Expect=1e-168]} {Mouse: ENSMUSG00000038115, Ano2, anoctamin 2, [RH, Score=533, Expect=6e-174]} {Dmel: FBgn0036235, CG6938, [RH, Score=557, Expect=1e-180]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=213, Expect=1e-57]} {Smed: dd_Smed_v6_5046_0_1, dd_Smed_v6_5046_0_1, [Score=461, Expect=2e-148]} {RNA1509_13805} {RNA1310_9771} {RNA815_1328}
6.	Mlig999010.1						1.67	-	-	-	-	0.952	0.718
7.	MligTC455_08781	795	16.57	Mlig455_004020, Mlig455_004051, Mlig455_004104	Neo: - Age: Up-Down-Down Region-enriched R2: 1.753/0.01741 Region-enriched R5: 1.075/0.03323	UBR5	0.968	-	-	-	0.968	-	-	Mlig455_004020 {REF} {Length: 900} {NoTransDecoderORF} {RNA1509_29921} {RNA1310_12070} {RNA815_9938} Mlig455_004051 {REF} {Length: 10870} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=204.4]; Poly-adenylate binding protein, unique domain [PF00658.20, score=70.9]} {Human: ENSG00000104517, UBR5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=568, Expect=3e-164]} {Mouse: ENSMUSG00000037487, Ubr5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=568, Expect=5e-164]} {Dmel: FBgn0002431, hyd, hyperplastic discs, [RH, Score=576, Expect=1e-166]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [RH, Score=250, Expect=3e-66]} {Smed: dd_Smed_v6_7658_0_1, dd_Smed_v6_7658_0_1, [RH, Score=474, Expect=1e-134]} {RNA1509_29921, RNA1509_4055} {RNA1310_350, RNA1509_29921, RNA1509_4055} {RNA1509_29921, RNA1509_4055, RNA815_1156} Mlig455_004104 {REF} {Length: 10283} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=204.2]; E3 ubiquitin ligase EDD [PF11547.10, score=98.2]; Poly-adenylate binding protein, unique domain [PF00658.20, score=70.7]} {Human: ENSG00000104517, UBR5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=751, Expect=0.0]} {Mouse: ENSMUSG00000037487, Ubr5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=754, Expect=0.0]} {Dmel: FBgn0002431, hyd, hyperplastic discs, [RH, Score=575, Expect=3e-165]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [RH, Score=249, Expect=1e-65]} {Smed: dd_Smed_v6_7658_0_1, dd_Smed_v6_7658_0_1, [RH, Score=473, Expect=1e-133]} {RNA1509_4055, RNA1509_41572, RNA1509_9074} {RNA1310_350, RNA1509_41572, RNA1509_9074} {RNA1509_41572, RNA1509_9074, RNA815_1156}
8.	MligTC455_26332	187	3.9	Mlig455_018200	Neo: - Age: - Region-enriched R5: 1.835/0.03799	KAT5	0.961	-	-	-	0.961	-	-	Mlig455_018200 {REF} {Length: 5488} {Pfam: MOZ/SAS family [PF01853.20, score=278.9]; MYST family zinc finger domain [PF17772.3, score=79.1]; RNA binding activity-knot of a chromodomain [PF11717.10, score=61.9]; Acetyltransferase (GNAT) domain [PF13508.9, score=21.7]} {Human: ENSG00000172977, KAT5, lysine acetyltransferase 5, [RH, Score=492, Expect=6e-170]} {Mouse: ENSMUSG00000024926, Kat5, K(lysine) acetyltransferase 5, [RH, Score=493, Expect=2e-170]} {Dmel: FBgn0026080, Tip60, Tat interactive protein 60kDa, [RH, Score=499, Expect=2e-172]} {Celegans: WBGene00007029, mys-1, Histone acetyltransferase Tip60 homolog, [RH, Score=417, Expect=9e-142]} {Smed: dd_Smed_v6_4706_1_2, dd_Smed_v6_4706_1_2, [RH, Score=456, Expect=6e-157]} {RNA1509_11464, RNA1509_45071} {RNA1310_14931, RNA1509_45071} {RNA1509_45071, RNA815_5906}
9.	MligTC455_48801	537	11.18	Mlig455_054489	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.685 Region-enriched R5: 1.314/0.00537		0.957	-	-	-	0.957	-	-	Mlig455_054489 {REF} {Length: 1148} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=105.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=136, Expect=1e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.9, Expect=2e-22]} {RNA1509_19052} {RNA1310_16765} {RNA815_13720}
10.	MligTC455_30115	5481	114.19	Mlig455_000515, Mlig455_007753, Mlig455_017491, Mlig455_053491	Neo: - Age: - Region-enriched R5: 1.897/0.00000 Regeneration-enriched BL: 1.629 Regeneration-enriched TP: 1.574		0.953	-	-	-	0.953	-	-	Mlig455_000515 {REF} {Length: 451} {NoTransDecoderORF} {RNA1509_14197} {RNA1310_72465} {RNA815_17047.1} Mlig455_007753 {REF} {Length: 480} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_017491 {REF} {Length: 253} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2} Mlig455_053491 {REF} {Length: 336} {NoTransDecoderORF} {RNA1509_24730} {RNA1310_72465} {RNA815_3035.2}
11.	MligTC455_40450	508	10.58	Mlig455_066551	Neo: - Age: Down-Up-Up		0.953	-	-	-	0.953	-	-	Mlig455_066551 {REF} {Length: 801} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=52.2]} {RNA1509_15023} {RNA1310_43419.1} {RNA815_22350}
12.	MligTC455_45499	426	8.87	Mlig455_002817	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.783		0.953	-	-	-	0.953	-	-	Mlig455_002817 {REF} {Length: 702} {NoTransDecoderORF} {RNA1509_46585} {RNA1310_59731.1} {RNA815_20911}
13.	MligTC455_49430	1362	28.38	Mlig455_041374	Neo: - Age: - Region-enriched R5: 1.493/0.04187 Regeneration-upregulated TP: 2.859 Regeneration-enriched TP: 2.859		0.953	0.953	-	-	-	-	-	Mlig455_041374 {REF} {Length: 1691} {Pfam: Basic region leucine zipper [PF07716.17, score=36.8]; Lactate racemase N-terminal domain [PF09861.11, score=18.5]} {RNA1509_8902} {RNA1310_20886, RNA1509_8902} {RNA1509_8902, RNA815_8401}
14.	MligTC455_43720	479	9.99	Mlig455_015527	Neo: - Age: - Region-enriched R3: 1.755/0.04928	BCLAF1	0.952	-	-	-	0.952	-	-	Mlig455_015527 {REF} {Length: 2478} {TRANSSPLICED} {Pfam: CASC3/Barentsz eIF4AIII binding [PF09405.12, score=23.9]} {Human: ENSG00000029363, BCLAF1, BCL2 associated transcription factor 1, [Score=56.6, Expect=3e-08]} {Mouse: ENSMUSG00000037608, Bclaf1, BCL2-associated transcription factor 1, [Score=61.6, Expect=4e-10]} {RNA1509_26662, RNA1509_47388, RNA1509_53993} {RNA1310_20784, RNA1509_26662, RNA1509_47388, RNA1509_53993} {RNA1509_26662, RNA1509_47388, RNA1509_53993, RNA815_16847}
15.	MligTC455_43596	10129	211.02	Mlig455_035999, Mlig455_036077, Mlig455_036101	Neo: - Age: Down-Up-Up Region-enriched R4: 1.148/0.00001	PGRMC2	0.951	-	-	-	-	0.951	-	Mlig455_035999 {REF} {Length: 506} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=107, Expect=1e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=107, Expect=1e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=86.3, Expect=3e-22]} {Celegans: WBGene00006890, vem-1, [Score=52.4, Expect=8e-10]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=83.2, Expect=1e-21]} {RNA1509_9081} {RNA1310_34181.2, RNA1509_9081} {RNA1509_9081, RNA815_19498} Mlig455_036077 {REF} {Length: 512} {TRANSSPLICED} {Pfam: Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=47.1]} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=158, Expect=1e-48]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=159, Expect=5e-49]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=159, Expect=4e-49]} {Celegans: WBGene00006890, vem-1, [RH, Score=101, Expect=3e-27]} {Smed: dd_Smed_v6_2076_0_1, dd_Smed_v6_2076_0_1, [Score=132, Expect=2e-39]} {RNA1509_26318, RNA1509_29023} {RNA1310_34181.1, RNA1509_26318} {RNA1509_26318, RNA815_19498} Mlig455_036101 {REF} {Length: 505} {TRANSSPLICED} {Human: ENSG00000164040, PGRMC2, progesterone receptor membrane component 2, [Score=105, Expect=6e-31]} {Mouse: ENSMUSG00000049940, Pgrmc2, progesterone receptor membrane component 2, [Score=106, Expect=4e-30]} {Dmel: FBgn0030703, MSBP, membrane steroid binding protein, [Score=87.8, Expect=9e-23]} {Celegans: WBGene00006890, vem-1, [Score=50.8, Expect=4e-09]} {Smed: dd_Smed_v6_7242_0_1, dd_Smed_v6_7242_0_1, [Score=84.7, Expect=3e-22]} {RNA1509_39652} {RNA1310_34181.1} {RNA815_19498}
16.	MligTC455_08780	397	8.27	Mlig455_004024	Neo: - Age: Up-Down-Down Region-enriched R2: 1.798/0.04471	UBR5	0.95	-	-	-	0.950	-	-	Mlig455_004024 {REF} {Length: 3743} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=206.8]; Poly-adenylate binding protein, unique domain [PF00658.20, score=72.3]} {Human: ENSG00000104517, UBR5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=562, Expect=1e-175]} {Mouse: ENSMUSG00000037487, Ubr5, ubiquitin protein ligase E3 component n-recognin 5, [RH, Score=560, Expect=5e-175]} {Dmel: FBgn0002431, hyd, hyperplastic discs, [RH, Score=562, Expect=5e-176]} {Celegans: WBGene00009460, ubr-5, UBR E3 ubiquitin ligase homolog, [RH, Score=246, Expect=5e-68]} {Smed: dd_Smed_v6_7658_0_1, dd_Smed_v6_7658_0_1, [RH, Score=302, Expect=5e-87]} {RNA1509_9074} {RNA1310_4179.1} {RNA815_749}
17.	MligTC455_30112	3031	63.15	Mlig455_067121	Neo: - Age: Down-Up-Down Region-enriched R5: 1.992/0.00000 Regeneration-upregulated BL: 1.545 Regeneration-enriched BL: 1.545		0.95	-	-	-	0.950	-	-	Mlig455_067121 {REF} {Length: 1495} {RNA1509_10342} {RNA1310_29108.1} {RNA815_3035.1}
18.	MligTC455_34420	572	11.92	Mlig455_068596	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.586	ANK3	0.95	0.950	-	-	-	-	-	Mlig455_068596 {REF} {Length: 3030} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=124.1]; Ankyrin repeats (many copies) [PF13637.8, score=105.9]; Ankyrin repeat [PF13606.8, score=89.2]; Ankyrin repeat [PF00023.32, score=80.3]; Ankyrin repeats (many copies) [PF13857.8, score=73.6]; Calponin homology (CH) domain [PF00307.33, score=24.8]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=114, Expect=1e-24]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=113, Expect=8e-25]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=116, Expect=9e-26]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=101, Expect=2e-21]} {Smed: dd_Smed_v6_10986_0_1, dd_Smed_v6_10986_0_1, [RH, Score=650, Expect=0.0]} {RNA1509_4310} {RNA1310_3592.1} {RNA815_588}

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