TomoSeq data search

Data search

Results for MligTC455_43614

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43614	1736	36.18	Mlig455_059631, Mlig455_059645	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.374		Mlig455_059631 {REF} {Length: 371} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681} {RNA815_47853.1} Mlig455_059645 {REF} {Length: 374} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681, RNA1509_13525} {RNA1509_13525, RNA815_47853.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43614

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.494	5.41	0.47025	1.00000
RegionR2	0.275	5.41	0.48124	0.86497
RegionR3	0.603	5.41	0.04611	0.37593
RegionR4	0.175	5.41	0.62776	0.93639
RegionR5	0.618	5.41	0.02841	0.12483
RegionR6	0.12	5.41	0.70183	1.00000
RegionR7	-0.769	5.41	0.04507	0.40777
RegionR8	-0.528	5.41	0.21347	0.81762

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.799	5.41	0.48985	1.00000
RegenerationR2	0.25	5.41	0.48430	0.86492
RegenerationR3	-0.24	5.41	0.53621	0.87514
RegenerationR4	0.284	5.41	0.47083	0.85385
RegenerationR5	0.05	5.41	0.89065	1.00000
RegenerationR6	-0.615	5.41	0.13788	0.45566
RegenerationBL	-0.129	5.41	0.77334	1.00000
RegenerationTP	0.574	5.41	0.20226	0.64391

Genes with expression patterns similar to MligTC455_43614

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43614	1736	36.18	Mlig455_059631, Mlig455_059645	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.374		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059631 {REF} {Length: 371} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681} {RNA815_47853.1} Mlig455_059645 {REF} {Length: 374} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681, RNA1509_13525} {RNA1509_13525, RNA815_47853.1}
2.	MligTC455_27795	564	11.75	Mlig455_005628	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.644	HELZ2	0.956	-	-	0.956	-	-	-	Mlig455_005628 {REF} {Length: 8036} {Pfam: RNB domain [PF00773.21, score=174.9]; AAA domain [PF13086.8, score=132.5]; AAA domain [PF13087.8, score=129.4]; UvrD-like helicase C-terminal domain [PF13361.8, score=21.5]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.3]; AAA domain [PF13604.8, score=21.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=18.8]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=171, Expect=9e-42]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=149, Expect=5e-35]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=118, Expect=4e-26]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=108, Expect=3e-23]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=318, Expect=2e-87]} {RNA1509_28701, RNA1509_35591} {RNA1310_587.1, RNA1509_28701, RNA1509_35591} {RNA1509_28701, RNA1509_35591, RNA815_982.1}
3.	MligTC455_32679	1614	33.61	Mlig455_029162, Mlig455_030252	Neo: - Age: -	SRGAP1	0.956	-	-	0.956	-	-	-	Mlig455_029162 {REF} {Length: 4454} {Pfam: RhoGAP domain [PF00620.29, score=99.0]; SH3 domain [PF00018.30, score=48.4]; Variant SH3 domain [PF14604.8, score=40.4]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.8]; Variant SH3 domain [PF07653.19, score=23.7]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [Score=410, Expect=5e-126]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [Score=403, Expect=4e-123]; ENSG00000266028, SRGAP2, SLIT-ROBO Rho GTPase activating protein 2, [Score=400, Expect=4e-122]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [Score=403, Expect=2e-123]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [Score=401, Expect=1e-122]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [Score=395, Expect=2e-120]} {Dmel: FBgn0263456, nwk, nervous wreck, [RH, Score=57.8, Expect=5e-08]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=297, Expect=3e-85]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [Score=343, Expect=2e-101]} {RNA1509_4307} {RNA1310_1568.1} {RNA815_447.1} Mlig455_030252 {REF} {Length: 5474} {Pfam: RhoGAP domain [PF00620.29, score=135.9]; SH3 domain [PF00018.30, score=48.1]; Variant SH3 domain [PF14604.8, score=40.0]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.6]; Variant SH3 domain [PF07653.19, score=23.3]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=450, Expect=2e-139]; ENSG00000266028, SRGAP2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=443, Expect=6e-137]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=436, Expect=5e-134]} {Mouse: ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=441, Expect=4e-136]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=437, Expect=5e-135]; ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=433, Expect=3e-133]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=75.1, Expect=1e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [RH, Score=333, Expect=3e-97]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=370, Expect=3e-110]} {RNA1509_4307, RNA1509_55991} {RNA1310_1568.1, RNA1509_55991} {RNA1509_55991, RNA815_447.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43614

1736

36.18

Mlig455_059631, Mlig455_059645

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.374

1.000

Mlig455_059631 {REF} {Length: 371} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681} {RNA815_47853.1}

Mlig455_059645 {REF} {Length: 374} {TRANSSPLICED} {RNA1509_13525} {RNA1310_92681, RNA1509_13525} {RNA1509_13525, RNA815_47853.1}

MligTC455_27795

564

11.75

Mlig455_005628

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.644

HELZ2

0.956

Mlig455_005628 {REF} {Length: 8036} {Pfam: RNB domain [PF00773.21, score=174.9]; AAA domain [PF13086.8, score=132.5]; AAA domain [PF13087.8, score=129.4]; UvrD-like helicase C-terminal domain [PF13361.8, score=21.5]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.3]; AAA domain [PF13604.8, score=21.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=18.8]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=171, Expect=9e-42]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=149, Expect=5e-35]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=118, Expect=4e-26]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=108, Expect=3e-23]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=318, Expect=2e-87]} {RNA1509_28701, RNA1509_35591} {RNA1310_587.1, RNA1509_28701, RNA1509_35591} {RNA1509_28701, RNA1509_35591, RNA815_982.1}

MligTC455_32679

1614

33.61

Mlig455_029162, Mlig455_030252

Neo: -

Age: -

SRGAP1

0.956

Mlig455_029162 {REF} {Length: 4454} {Pfam: RhoGAP domain [PF00620.29, score=99.0]; SH3 domain [PF00018.30, score=48.4]; Variant SH3 domain [PF14604.8, score=40.4]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.8]; Variant SH3 domain [PF07653.19, score=23.7]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [Score=410, Expect=5e-126]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [Score=403, Expect=4e-123]; ENSG00000266028, SRGAP2, SLIT-ROBO Rho GTPase activating protein 2, [Score=400, Expect=4e-122]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [Score=403, Expect=2e-123]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [Score=401, Expect=1e-122]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [Score=395, Expect=2e-120]} {Dmel: FBgn0263456, nwk, nervous wreck, [RH, Score=57.8, Expect=5e-08]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=297, Expect=3e-85]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [Score=343, Expect=2e-101]} {RNA1509_4307} {RNA1310_1568.1} {RNA815_447.1}

Mlig455_030252 {REF} {Length: 5474} {Pfam: RhoGAP domain [PF00620.29, score=135.9]; SH3 domain [PF00018.30, score=48.1]; Variant SH3 domain [PF14604.8, score=40.0]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.6]; Variant SH3 domain [PF07653.19, score=23.3]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=450, Expect=2e-139]; ENSG00000266028, SRGAP2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=443, Expect=6e-137]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=436, Expect=5e-134]} {Mouse: ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=441, Expect=4e-136]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=437, Expect=5e-135]; ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=433, Expect=3e-133]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=75.1, Expect=1e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [RH, Score=333, Expect=3e-97]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=370, Expect=3e-110]} {RNA1509_4307, RNA1509_55991} {RNA1310_1568.1, RNA1509_55991} {RNA1509_55991, RNA815_447.1}