TomoSeq data search

Data search

Results for MligTC455_43635

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43635

518

10.80

Mlig455_059810

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.273

MRPS12

Mlig455_059810 {REF} {Length: 1090} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=92.6]} {Human: ENSG00000128626, MRPS12, mitochondrial ribosomal protein S12, [RH, Score=135, Expect=7e-40]; ENSG00000283018, MRPS12, mitochondrial ribosomal protein S12, [RH, Score=135, Expect=7e-40]} {Mouse: ENSMUSG00000045948, Mrps12, mitochondrial ribosomal protein S12, [RH, Score=141, Expect=2e-42]} {Dmel: FBgn0003714, tko, technical knockout, [RH, Score=154, Expect=1e-47]} {Celegans: WBGene00011391, mrps-12, Mitochondrial Ribosomal Protein, Small, [RH, Score=119, Expect=8e-34]} {Smed: dd_Smed_v6_4042_0_1, dd_Smed_v6_4042_0_1, [RH, Score=174, Expect=4e-56]} {RNA1509_19243, RNA1509_40565} {RNA1310_29257, RNA1509_19243, RNA1509_40565} {RNA1509_19243, RNA1509_40565, RNA815_15787}

Cumulative graph for MligTC455_43635

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.937	3.916	0.14887	0.76297
RegionR2	0.67	3.916	0.17372	0.52088
RegionR3	0.395	3.916	0.29526	0.83718
RegionR4	0.159	3.916	0.72961	1.00000
RegionR5	0.554	3.916	0.09572	0.29648
RegionR6	0.291	3.916	0.46140	1.00000
RegionR7	0.277	3.916	0.59055	1.00000
RegionR8	-0.408	3.916	0.56830	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.157	3.916	0.48566	1.00000
RegenerationR2	-0.22	3.916	0.59042	0.91143
RegenerationR3	-0.062	3.916	0.88831	1.00000
RegenerationR4	-0.134	3.916	0.76055	0.97301
RegenerationR5	-0.02	3.916	0.96243	1.00000
RegenerationR6	1.057	3.916	0.01042	0.12620
RegenerationBL	0.539	3.916	0.37316	0.74143
RegenerationTP	0.521	3.916	0.40398	0.83185

Genes with expression patterns similar to MligTC455_43635

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43635	518	10.8	Mlig455_059810	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.273	MRPS12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059810 {REF} {Length: 1090} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=92.6]} {Human: ENSG00000128626, MRPS12, mitochondrial ribosomal protein S12, [RH, Score=135, Expect=7e-40]; ENSG00000283018, MRPS12, mitochondrial ribosomal protein S12, [RH, Score=135, Expect=7e-40]} {Mouse: ENSMUSG00000045948, Mrps12, mitochondrial ribosomal protein S12, [RH, Score=141, Expect=2e-42]} {Dmel: FBgn0003714, tko, technical knockout, [RH, Score=154, Expect=1e-47]} {Celegans: WBGene00011391, mrps-12, Mitochondrial Ribosomal Protein, Small, [RH, Score=119, Expect=8e-34]} {Smed: dd_Smed_v6_4042_0_1, dd_Smed_v6_4042_0_1, [RH, Score=174, Expect=4e-56]} {RNA1509_19243, RNA1509_40565} {RNA1310_29257, RNA1509_19243, RNA1509_40565} {RNA1509_19243, RNA1509_40565, RNA815_15787}
2.	MligTC455_39323	478	9.96	Mlig455_021384	Neo: - Age: -	CRELD1	1.684	-	-	-	0.955	0.729	-	Mlig455_021384 {REF} {Length: 3130} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=33.7]; Complement Clr-like EGF-like [PF12662.9, score=31.8]; TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=31.6]; Laminin EGF domain [PF00053.26, score=19.6]; Human growth factor-like EGF [PF12661.9, score=19.4]} {Human: ENSG00000163703, CRELD1, cysteine rich with EGF like domains 1, [RH, Score=206, Expect=1e-61]; ENSG00000184164, CRELD2, cysteine rich with EGF like domains 2, [RH, Score=199, Expect=1e-59]} {Mouse: ENSMUSG00000030284, Creld1, cysteine-rich with EGF-like domains 1, [RH, Score=208, Expect=2e-62]} {Dmel: FBgn0031217, CG11377, [RH, Score=162, Expect=2e-45]} {Celegans: WBGene00008624, F09E8.2, [RH, Score=166, Expect=3e-47]} {Smed: dd_Smed_v6_4289_0_1, dd_Smed_v6_4289_0_1, [RH, Score=263, Expect=8e-84]} {RNA1509_39062} {RNA1310_10876.1} {RNA815_12990.1}
3.	MligTC455_53406	318	6.63	Mlig455_024278	Neo: - Age: Up-Down-Up	VPS26C	0.96	-	-	-	0.960	-	-	Mlig455_024278 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: Vacuolar protein sorting-associated protein 26 [PF03643.17, score=172.7]} {Human: ENSG00000157538, VPS26C, VPS26 endosomal protein sorting factor C, [RH, Score=373, Expect=3e-130]} {Mouse: ENSMUSG00000022898, Vps26c, VPS26 endosomal protein sorting factor C, [RH, Score=367, Expect=6e-128]} {Dmel: FBgn0037017, CG4074, [RH, Score=275, Expect=5e-92]} {Smed: dd_Smed_v6_3520_0_1, dd_Smed_v6_3520_0_1, [RH, Score=306, Expect=2e-104]} {RNA1509_17953, RNA1509_28631, RNA1509_35340, RNA1509_52798} {RNA1310_29463, RNA1509_17953, RNA1509_28631, RNA1509_35340, RNA1509_52798} {RNA1509_17953, RNA1509_28631, RNA1509_35340, RNA1509_52798, RNA815_13522}
4.	MligTC455_50498	479	9.98	Mlig455_057011	Neo: - Age: logFC(26M/2M)=-0.264 Region-enriched R6: 2.634/0.00013 Region-enriched R7: 2.524/0.00120		0.955	-	-	-	0.955	-	-	Mlig455_057011 {REF} {Length: 3854} {Pfam: C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.1]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.0]; Zinc finger, C2H2 type [PF00096.28, score=21.7]; C2H2-type zinc finger [PF13894.8, score=19.5]} {Dmel: FBgn0028979, tio, tiptop, [RH, Score=80.1, Expect=5e-15]} {Smed: dd_Smed_v6_9287_0_1, dd_Smed_v6_9287_0_1, [RH, Score=164, Expect=2e-41]} {RNA1509_16466} {RNA1310_2873} {RNA815_25176}
5.	MligTC455_44306	2319	48.32	Mlig455_002647	Neo: Int S/G2/M Age: -	PABPN1	0.953	-	-	-	0.953	-	-	Mlig455_002647 {REF} {Length: 1192} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]} {Human: ENSG00000100836, PABPN1, poly(A) binding protein nuclear 1, [RH, Score=186, Expect=6e-58]; ENSG00000258643, BCL2L2-PABPN1, BCL2L2-PABPN1 readthrough, [RH, Score=182, Expect=9e-56]} {Mouse: ENSMUSG00000022194, Pabpn1, poly(A) binding protein, nuclear 1, [RH, Score=185, Expect=1e-57]; ENSMUSG00000092232, Gm20521, predicted gene 20521, [RH, Score=181, Expect=1e-55]} {Dmel: FBgn0005648, Pabp2, [RH, Score=219, Expect=5e-72]} {Celegans: WBGene00003904, pabp-2, PolyA Binding Protein (Nuclear), [RH, Score=157, Expect=3e-48]} {Smed: dd_Smed_v6_2924_0_1, dd_Smed_v6_2924_0_1, [RH, Score=150, Expect=2e-45]} {RNA1509_10120} {RNA1310_27727} {RNA815_12820}
6.	MligTC455_33672	786	16.37	Mlig455_034078	Neo: - Age: - Region-enriched R8: 2.381/0.00087 Region-enriched R6: 1.743/0.00014	TSHZ2	0.952	-	-	-	0.952	-	-	Mlig455_034078 {REF} {Length: 3208} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=27.8]; Zinc finger, C2H2 type [PF00096.28, score=27.3]} {Human: ENSG00000182463, TSHZ2, teashirt zinc finger homeobox 2, [RH, Score=61.2, Expect=5e-09]; ENSG00000179981, TSHZ1, teashirt zinc finger homeobox 1, [RH, Score=58.2, Expect=5e-08]} {Mouse: ENSMUSG00000047907, Tshz2, teashirt zinc finger family member 2, [RH, Score=60.8, Expect=5e-09]} {Dmel: FBgn0028979, tio, tiptop, [RH, Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_9287_0_1, dd_Smed_v6_9287_0_1, [Score=147, Expect=1e-36]} {RNA1509_10243} {RNA1310_3874} {RNA815_22024.1}
7.	MligTC455_27955	539	11.23	Mlig455_050133	Neo: - Age: - Regeneration-enriched BL: 2.316 Regeneration-enriched R6: 1.860	KLHDC8B	0.951	-	-	-	0.951	-	-	Mlig455_050133 {REF} {Length: 2014} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=121.0]; Kelch motif [PF13964.8, score=114.7]; Galactose oxidase, central domain [PF13418.8, score=80.3]; Galactose oxidase, central domain [PF13415.8, score=76.8]; Kelch motif [PF07646.17, score=50.6]; Kelch motif [PF13854.8, score=41.2]; Protein of unknown function (DUF1668) [PF07893.15, score=28.3]} {Human: ENSG00000185909, KLHDC8B, kelch domain containing 8B, [RH, Score=162, Expect=4e-46]} {Mouse: ENSMUSG00000032609, Klhdc8b, kelch domain containing 8B, [RH, Score=162, Expect=2e-46]} {Dmel: FBgn0040230, dbo, diablo, [Score=67.4, Expect=6e-12]} {Celegans: WBGene00008269, C53A5.11, [Score=57.8, Expect=4e-09]} {Smed: dd_Smed_v6_2508_0_1, dd_Smed_v6_2508_0_1, [RH, Score=160, Expect=3e-46]} {RNA1509_20477} {RNA1310_11616, RNA1509_20477} {RNA1509_20477, RNA815_11073}
8.	MligTC455_40358	620	12.93	Mlig455_058244	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.027/0.02464	KIAA1614	0.95	-	-	-	0.950	-	-	Mlig455_058244 {REF} {Length: 1806} {Human: ENSG00000135835, KIAA1614, KIAA1614, [RH, Score=74.3, Expect=7e-15]} {Mouse: ENSMUSG00000033722, BC034090, cDNA sequence BC034090, [RH, Score=69.7, Expect=3e-12]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [Score=57.8, Expect=8e-09]} {RNA1509_45042, RNA1509_53366} {RNA1310_14547, RNA1509_45042, RNA1509_53366} {RNA1509_45042, RNA1509_53366, RNA815_27946}

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