Data search
Results for MligTC455_43704
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43704 | 2154 | 44.88 | Mlig455_045986 | Neo: - Age: - Region-enriched R4: 1.252/0.00264 |
CLPX | Mlig455_045986 {REF} {Length: 3306} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=146.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=54.6]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=34.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=31.0]; Sigma-54 interaction domain [PF00158.28, score=27.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=22.5]; MCM P-loop domain [PF00493.25, score=21.9]; AAA ATPase domain [PF13191.8, score=19.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.6]; AAA domain [PF13401.8, score=19.4]} {Human: ENSG00000166855, CLPX, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=446, Expect=2e-148]} {Mouse: ENSMUSG00000015357, Clpx, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=448, Expect=2e-149]} {Dmel: FBgn0038745, CG4538, [RH, Score=446, Expect=3e-148]} {Celegans: WBGene00008412, D2030.2, [RH, Score=368, Expect=5e-119]} {Smed: dd_Smed_v6_6460_0_1, dd_Smed_v6_6460_0_1, [RH, Score=366, Expect=2e-118]} {RNA1509_5163} {RNA1310_3401} {RNA815_1346.1} |
Cumulative graph for MligTC455_43704
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.036 | 5.646 | 0.95158 | 1.00000 | |
| RegionR2 | 0.043 | 5.646 | 0.90848 | 1.00000 | |
| RegionR3 | 0.094 | 5.646 | 0.76387 | 1.00000 | |
| RegionR4 | 1.252 | 5.646 | 0.00018 | 0.00264 | |
| RegionR5 | 0.001 | 5.646 | 0.99686 | 1.00000 | |
| RegionR6 | -0.02 | 5.646 | 0.94918 | 1.00000 | |
| RegionR7 | -0.255 | 5.646 | 0.48075 | 1.00000 | |
| RegionR8 | -1.151 | 5.646 | 0.01575 | 0.24451 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.108 | 5.646 | 0.04251 | 0.67581 | |
| RegenerationR2 | 0.292 | 5.646 | 0.41032 | 0.82048 | |
| RegenerationR3 | 0.308 | 5.646 | 0.41357 | 0.81102 | |
| RegenerationR4 | -0.81 | 5.646 | 0.03469 | 0.30079 | |
| RegenerationR5 | 0.201 | 5.646 | 0.57763 | 0.89936 | |
| RegenerationR6 | 0.454 | 5.646 | 0.22853 | 0.57408 | |
| RegenerationBL | 0.784 | 5.646 | 0.03914 | 0.22419 | |
| RegenerationTP | -0.083 | 5.646 | 0.85723 | 1.00000 |
Genes with expression patterns similar to MligTC455_43704
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43704 | 2154 | 44.88 | Mlig455_045986 | Neo: - Age: - Region-enriched R4: 1.252/0.00264 |
CLPX | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045986 {REF} {Length: 3306} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=146.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=54.6]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=34.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=31.0]; Sigma-54 interaction domain [PF00158.28, score=27.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=22.5]; MCM P-loop domain [PF00493.25, score=21.9]; AAA ATPase domain [PF13191.8, score=19.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=19.6]; AAA domain [PF13401.8, score=19.4]} {Human: ENSG00000166855, CLPX, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=446, Expect=2e-148]} {Mouse: ENSMUSG00000015357, Clpx, caseinolytic mitochondrial matrix peptidase chaperone subunit, [Score=448, Expect=2e-149]} {Dmel: FBgn0038745, CG4538, [RH, Score=446, Expect=3e-148]} {Celegans: WBGene00008412, D2030.2, [RH, Score=368, Expect=5e-119]} {Smed: dd_Smed_v6_6460_0_1, dd_Smed_v6_6460_0_1, [RH, Score=366, Expect=2e-118]} {RNA1509_5163} {RNA1310_3401} {RNA815_1346.1} |
| 2. | MligTC455_24738 | 321 | 6.68 | Mlig455_000536 | Neo: Int S/G2/M Age: - |
ANKRD17 | 1.71 | - | - | - | 0.750 | 0.960 | - | Mlig455_000536 {REF} {Length: 7872} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=440.1]; Ankyrin repeats (many copies) [PF13637.8, score=343.1]; Ankyrin repeat [PF13606.8, score=326.9]; Ankyrin repeat [PF00023.32, score=325.7]; Ankyrin repeats (many copies) [PF13857.8, score=263.1]; KH domain [PF00013.31, score=64.2]; KH domain [PF13083.8, score=24.3]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [RH, Score=579, Expect=2e-169]; ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [RH, Score=578, Expect=1e-168]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [RH, Score=578, Expect=0.0]} {Mouse: ENSMUSG00000024483, Ankhd1, ankyrin repeat and KH domain containing 1, [RH, Score=578, Expect=4e-169]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [RH, Score=578, Expect=2e-169]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [RH, Score=583, Expect=9e-170]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [RH, Score=498, Expect=9e-148]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [RH, Score=513, Expect=9e-150]} {RNA1509_5961} {RNA1310_371} {RNA815_13478} |
| 3. | MligTC455_40085 | 1042 | 21.7 | Mlig455_017812 | Neo: - Age: - |
COPA | 0.961 | - | - | - | 0.961 | - | - | Mlig455_017812 {REF} {Length: 5061} {Pfam: Coatomer (COPI) alpha subunit C-terminus [PF06957.13, score=504.4]; Coatomer WD associated region [PF04053.16, score=415.9]; WD domain, G-beta repeat [PF00400.34, score=129.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.3]} {Human: ENSG00000122218, COPA, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Mouse: ENSMUSG00000026553, Copa, coatomer protein complex subunit alpha, [RH, Score=1707, Expect=0.0]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [RH, Score=1533, Expect=0.0]} {Celegans: WBGene00022119, copa-1, Coatomer subunit alpha, [RH, Score=1371, Expect=0.0]} {Smed: dd_Smed_v6_1980_0_1, dd_Smed_v6_1980_0_1, [RH, Score=1512, Expect=0.0]} {RNA1509_1280} {RNA1310_1196.1, RNA1509_1280} {RNA1509_1280, RNA815_2831.1} |
| 4. | MligTC455_45779 | 1204 | 25.08 | Mlig455_033999 | Neo: - Age: - Region-enriched R4: 2.197/0.00003 |
STRN3 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_033999 {REF} {Length: 4796} {Pfam: Striatin family [PF08232.14, score=151.3]; WD domain, G-beta repeat [PF00400.34, score=106.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=26.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=307, Expect=1e-91]; ENSG00000090372, STRN4, striatin 4, [Score=303, Expect=3e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=483, Expect=2e-158]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=5e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=282, Expect=7e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=5e-77]} {RNA1509_4159, RNA1509_44682} {RNA1310_1645.1, RNA1509_44682} {RNA1509_44682, RNA815_5062} |
| 5. | MligTC455_04630 | 182 | 3.78 | Mlig455_065416 | Neo: - Age: Up-Down-Down |
0.957 | - | - | - | 0.957 | - | - | Mlig455_065416 {REF} {Length: 9463} {TRANSSPLICED} {RNA1509_18686, RNA1509_21951, RNA1509_3173} {RNA1310_306, RNA1509_18686, RNA1509_21951, RNA1509_3173} {RNA1509_18686, RNA1509_21951, RNA1509_3173, RNA815_153.1} | |
| 6. | MligTC455_41846 | 1521 | 31.68 | Mlig455_011124 | Neo: - Age: - |
ADAP1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_011124 {REF} {Length: 2681} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=70.6]; Putative GTPase activating protein for Arf [PF01412.20, score=61.5]} {Human: ENSG00000105963, ADAP1, ArfGAP with dual PH domains 1, [RH, Score=223, Expect=4e-69]} {Mouse: ENSMUSG00000056413, Adap1, ArfGAP with dual PH domains 1, [RH, Score=217, Expect=4e-67]} {Celegans: WBGene00012359, W09D10.1, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_1479_0_1, dd_Smed_v6_1479_0_1, [Score=142, Expect=8e-39]} {RNA1509_25171, RNA1509_9425} {RNA1310_23977, RNA1509_25171, RNA1509_9425} {RNA1509_25171, RNA1509_9425, RNA815_10783} |
| 7. | MligTC455_16784 | 1482 | 30.87 | Mlig455_045891 | Neo: Neoblast Age: - Regeneration-enriched R6: 1.382 |
TIMM10 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_045891 {REF} {Length: 2072} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=69.3]} {Human: ENSG00000134809, TIMM10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=1e-23]} {Mouse: ENSMUSG00000027076, Timm10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=7e-24]} {Dmel: FBgn0027360, Tim10, Translocase of inner membrane 10, [RH, Score=90.5, Expect=6e-25]} {Celegans: WBGene00006573, tin-10, Mitochondrial import inner membrane translocase subunit Tim10, [RH, Score=85.1, Expect=7e-23]} {Smed: dd_Smed_v6_1710_0_1, dd_Smed_v6_1710_0_1, [RH, Score=87.8, Expect=6e-24]} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1310_45745, RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821, RNA815_24837.1} |
Berezikov Lab - 2020-2021 © ERIBA