TomoSeq data search

Data search

Results for MligTC455_43753

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43753	82	1.71	Mlig455_018087	Neo: - Age: -		Mlig455_018087 {REF} {Length: 2050} {RNA1509_20267} {RNA1310_4680} {RNA815_3273}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43753

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.539	1.714	0.85447	1.00000
RegionR2	1.101	1.714	0.30969	0.70058
RegionR3	0.468	1.714	0.52001	1.00000
RegionR4	-0.686	1.714	0.53959	0.86223
RegionR5	-1.312	1.714	0.10033	0.30591
RegionR6	-0.431	1.714	0.64282	1.00000
RegionR7	0.535	1.714	0.63261	1.00000
RegionR8	-0.215	1.714	0.91077	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.754	1.714	0.78192	1.00000
RegenerationR2	1.702	1.714	0.04917	0.36628
RegenerationR3	1.849	1.714	0.06698	0.43608
RegenerationR4	1.224	1.714	0.29011	0.73423
RegenerationR5	1.553	1.714	0.11441	0.50943
RegenerationR6	1.829	1.714	0.11212	0.41253
RegenerationBL	1.402	1.714	0.41621	0.78533
RegenerationTP	2.487	1.714	0.03915	0.32984

Genes with expression patterns similar to MligTC455_43753

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43753	82	1.71	Mlig455_018087	Neo: - Age: -		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_018087 {REF} {Length: 2050} {RNA1509_20267} {RNA1310_4680} {RNA815_3273}
2.	MligTC455_34892	372	7.75	Mlig455_064967	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.604 Region-enriched R8: 3.123/0.00904	CYP2J2	1.666	-	-	-	-	0.708	0.958	Mlig455_064967 {REF} {Length: 3245} {Pfam: Cytochrome P450 [PF00067.24, score=299.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=261, Expect=7e-81]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [RH, Score=276, Expect=9e-87]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [RH, Score=268, Expect=2e-83]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [RH, Score=267, Expect=2e-83]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=186, Expect=2e-52]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=226, Expect=4e-68]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=263, Expect=3e-82]} {RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1310_10949.2, RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1509_38384, RNA1509_39728, RNA1509_51765, RNA815_7159}
3.	MligTC455_26219	33	0.69	Mlig455_032559	Neo: Irradiation Age: Down-Up-Down		0.993	-	-	-	-	0.993	-	Mlig455_032559 {REF} {Length: 2476} {TRANSSPLICED} {RNA1509_38431} {RNA1310_17856.1} {RNA815_9396}
4.	MligTC455_07618	9	0.19	Mlig455_046329	Neo: - Age: -	UNK	0.987	-	-	-	-	0.987	-	Mlig455_046329 {REF} {Length: 3693} {Pfam: Unkempt Zinc finger domain 1 (Znf1) [PF18384.3, score=68.1]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.9]} {Human: ENSG00000132478, UNK, unkempt family zinc finger, [RH, Score=435, Expect=3e-140]} {Mouse: ENSMUSG00000020770, Unk, unkempt family zinc finger, [RH, Score=435, Expect=2e-140]} {Dmel: FBgn0004395, unk, unkempt, [RH, Score=414, Expect=6e-134]} {Celegans: WBGene00016407, C34D10.2, [RH, Score=418, Expect=9e-136]} {Smed: dd_Smed_v6_3128_1_1, dd_Smed_v6_3128_1_1, [RH, Score=483, Expect=7e-160]} {RNA1509_7679} {RNA1310_1262.1} {RNA815_11537}
5.	MligTC455_10605	2	0.04	Mlig455_047968	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_047968 {REF} {Length: 297} {NoTransDecoderORF} {RNA1509_34377} {RNA1310_100135} {RNA815_25886}
6.	MligTC455_19126	10	0.2	Mlig455_009225	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_009225 {REF} {Length: 1570} {Pfam: Galactosyltransferase [PF01762.23, score=21.4]} {Mouse: ENSMUSG00000031803, B3gnt3, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, [Score=50.4, Expect=1e-06]} {RNA1310_57689} {RNA815_57743}
7.	MligTC455_55494	2	0.05	Mlig455_004790	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_004790 {REF} {Length: 600} {Pfam: Receptor family ligand binding region [PF01094.30, score=64.3]; Periplasmic binding protein [PF13458.8, score=19.1]}
8.	MligTC455_00622	2	0.05	Mlig455_047108	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_047108 {REF} {Length: 64} {NoTransDecoderORF}
9.	MligTC455_33875	32	0.67	Mlig455_039631	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_039631 {REF} {Length: 3055} {TRANSSPLICED} {RNA1509_14655, RNA1509_53977} {RNA1310_22046.1, RNA1509_53977} {RNA1509_53977, RNA815_8738}
10.	MligTC455_35325	26	0.54	Mlig455_008452, Mlig455_031353, Mlig455_056519	Neo: - Age: -	HTR3A	0.97	-	-	-	-	0.970	-	Mlig455_008452 {REF} {Length: 1552} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=81.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=26.8]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=97.4, Expect=2e-22]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=92.8, Expect=1e-20]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=92.8, Expect=6e-21]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=91.7, Expect=2e-20]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=93.2, Expect=4e-21]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=98.2, Expect=6e-23]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=88.6, Expect=9e-20]} {RNA1509_7752} {RNA1310_93708} {RNA815_49010} Mlig455_031353 {REF} {Length: 1802} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=61.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=54.4]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=103, Expect=5e-25]; ENSG00000149305, HTR3B, 5-hydroxytryptamine receptor 3B, [Score=101, Expect=1e-24]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=100, Expect=4e-24]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=98.2, Expect=2e-23]; ENSMUSG00000008590, Htr3b, 5-hydroxytryptamine (serotonin) receptor 3B, [Score=96.3, Expect=7e-23]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=93.6, Expect=6e-22]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=100, Expect=1e-24]} {Smed: dd_Smed_v6_11955_0_1, dd_Smed_v6_11955_0_1, [Score=90.5, Expect=5e-21]} {RNA1509_7752} {RNA1310_93708} {RNA815_49010} Mlig455_056519 {REF} {Length: 1867} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=81.9]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=26.8]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=97.4, Expect=2e-22]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=92.8, Expect=1e-20]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=92.8, Expect=6e-21]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=91.7, Expect=2e-20]; ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=93.2, Expect=4e-21]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=98.2, Expect=6e-23]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=88.6, Expect=9e-20]} {RNA1509_53098} {RNA1310_93708} {RNA815_49010}
11.	MligTC455_20099	15	0.32	Mlig455_037109	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_037109 {REF} {Length: 817} {NoTransDecoderORF} {RNA1310_30726} {RNA815_35778}
12.	MligTC455_54034	260	5.41	Mlig455_017202	Neo: - Age: - Region-enriched R8: 2.476/0.02915	CALML3	0.966	-	-	-	-	-	0.966	Mlig455_017202 {REF} {Length: 1789} {Pfam: EF hand [PF00036.34, score=86.0]; EF-hand domain pair [PF13499.8, score=75.1]; EF hand [PF13202.8, score=71.2]; EF-hand domain [PF13405.8, score=67.8]; EF-hand domain pair [PF13833.8, score=53.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.0]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=82.8, Expect=1e-20]; ENSG00000198668, CALM1, calmodulin 1, [Score=79.7, Expect=2e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=79.7, Expect=2e-19]; ENSG00000143933, CALM2, calmodulin 2, [Score=79.7, Expect=2e-19]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=81.6, Expect=3e-20]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=79.7, Expect=1e-19]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=79.7, Expect=1e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=79.7, Expect=1e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=77.8, Expect=6e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=77.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=77.8, Expect=4e-19]} {RNA1509_40737} {RNA1310_63281, RNA1509_40737} {RNA1509_40737, RNA815_19875}
13.	MligTC455_37761	12	0.26	Mlig455_014845	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_014845 {REF} {Length: 2142} {Pfam: CUB domain [PF00431.22, score=21.3]} {RNA1310_77188}
14.	MligTC455_22853	33	0.7	Mlig455_019405, Mlig455_059068	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_019405 {REF} {Length: 4200} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=66.2, Expect=9e-12]} {RNA1310_63811} Mlig455_059068 {REF} {Length: 4200} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.4]; Integrase core domain [PF00665.28, score=32.8]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.5, Expect=1e-10]} {RNA1310_63811}
15.	MligTC455_39396	469	9.77	Mlig455_031203	Neo: - Age: - Region-enriched R8: 3.069/0.00001	ARRDC3	0.959	-	-	-	-	-	0.959	Mlig455_031203 {REF} {Length: 1835} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=114.8]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=66.5]; Rgp1 [PF08737.12, score=23.6]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=113, Expect=1e-27]} {Dmel: FBgn0037517, CG10086, [RH, Score=85.1, Expect=1e-17]} {Celegans: WBGene00009579, arrd-6, ARRestin Domain protein, [RH, Score=322, Expect=2e-106]} {RNA1509_30037} {RNA1310_19411, RNA1509_30037} {RNA1509_30037, RNA815_7851}
16.	MligTC455_33637	187	3.9	Mlig455_027211, Mlig455_027458	Neo: - Age: - Region-enriched R2: 3.458/0.04514	CHRNA10, CHRNA7	0.957	-	-	-	-	0.957	-	Mlig455_027211 {REF} {Length: 782} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=71.6]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=89.4, Expect=4e-20]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=89.4, Expect=4e-20]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=89.0, Expect=2e-20]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=89.0, Expect=1e-20]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=88.6, Expect=7e-20]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=88.6, Expect=7e-20]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=92.0, Expect=4e-21]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=81.6, Expect=9e-18]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=71.6, Expect=2e-14]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=86.3, Expect=1e-19]} {RNA1310_19147.2} {RNA815_8553.2} Mlig455_027458 {REF} {Length: 1493} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=93.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=71.5]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=149, Expect=1e-39]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=148, Expect=1e-39]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=133, Expect=5e-34]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=144, Expect=6e-38]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=144, Expect=7e-38]} {RNA1310_19147.2} {RNA815_8553.2}
17.	MligTC455_52682	21	0.43	Mlig455_013941	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_013941 {REF} {Length: 1367} {RNA1310_139127}
18.	MligTC455_37789	16	0.34	Mlig455_002723	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_002723 {REF} {Length: 349} {NoTransDecoderORF} {RNA1310_134759}
19.	MligTC455_46089	2032	42.33	Mlig455_042709	Neo: - Age: logFC(26M/2M)=-0.465	ARG1	0.955	-	-	-	-	-	0.955	Mlig455_042709 {REF} {Length: 1600} {Pfam: Arginase family [PF00491.23, score=223.6]} {Human: ENSG00000118520, ARG1, arginase 1, [RH, Score=286, Expect=2e-94]; ENSG00000081181, ARG2, arginase 2, [RH, Score=272, Expect=1e-88]} {Mouse: ENSMUSG00000019987, Arg1, arginase, liver, [RH, Score=277, Expect=3e-91]; ENSMUSG00000021125, Arg2, arginase type II, [RH, Score=267, Expect=1e-86]} {Dmel: FBgn0023535, arg, arginase, [RH, Score=222, Expect=2e-69]} {Celegans: WBGene00020658, T21F4.1, [RH, Score=97.1, Expect=2e-22]} {RNA1509_23735, RNA1509_6004} {RNA1310_18478, RNA1509_23735, RNA1509_6004} {RNA1509_23735, RNA1509_6004, RNA815_8847}
20.	MligTC455_26941	8	0.16	Mlig455_040102	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	0.953	-	Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1}
21.	MligTC455_19210	100	2.09	Mlig455_052574	Neo: - Age: logFC(26M/2M)=-0.927		0.952	-	-	-	-	0.952	-	Mlig455_052574 {REF} {Length: 1407} {Celegans: WBGene00019180, H10D18.5, [RH, Score=62.4, Expect=6e-11]} {Smed: dd_Smed_v6_10251_0_1, dd_Smed_v6_10251_0_1, [RH, Score=95.9, Expect=2e-23]} {RNA1310_25906} {RNA815_14581.1}