Data search
Results for MligTC455_26941
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26941 | 8 | 0.16 | Mlig455_040102 | Neo: - Age: Down-Up-Down |
Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1} |
Cumulative graph for MligTC455_26941
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_26941
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26941 | 8 | 0.16 | Mlig455_040102 | Neo: - Age: Down-Up-Down |
1 | - | - | - | - | 1.000 | - | Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1} | |
| 2. | MligTC455_50475 | 165 | 3.43 | Mlig455_022326 | Neo: - Age: - Regeneration-downregulated R4: -4.258 Regeneration-depleted R4: -4.258 |
RNF25 | 0.984 | - | - | - | - | 0.984 | - | Mlig455_022326 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=56.4]; RING-like zinc finger [PF17123.7, score=33.6]; Ring finger domain [PF13639.8, score=29.6]; RING-type zinc-finger [PF13445.8, score=25.5]; zinc-RING finger domain [PF14634.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]} {Human: ENSG00000163481, RNF25, ring finger protein 25, [RH, Score=119, Expect=7e-29]} {Mouse: ENSMUSG00000026171, Rnf25, ring finger protein 25, [RH, Score=125, Expect=3e-31]} {Dmel: FBgn0033884, CG13344, [RH, Score=91.3, Expect=9e-20]} {Celegans: WBGene00021812, Y53G8AR.5, [RH, Score=54.7, Expect=5e-08]} {RNA1509_6393} {RNA1310_12987} {RNA815_3992.1} |
| 3. | MligTC455_07618 | 9 | 0.19 | Mlig455_046329 | Neo: - Age: - |
UNK | 0.964 | - | - | - | - | 0.964 | - | Mlig455_046329 {REF} {Length: 3693} {Pfam: Unkempt Zinc finger domain 1 (Znf1) [PF18384.3, score=68.1]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.9]} {Human: ENSG00000132478, UNK, unkempt family zinc finger, [RH, Score=435, Expect=3e-140]} {Mouse: ENSMUSG00000020770, Unk, unkempt family zinc finger, [RH, Score=435, Expect=2e-140]} {Dmel: FBgn0004395, unk, unkempt, [RH, Score=414, Expect=6e-134]} {Celegans: WBGene00016407, C34D10.2, [RH, Score=418, Expect=9e-136]} {Smed: dd_Smed_v6_3128_1_1, dd_Smed_v6_3128_1_1, [RH, Score=483, Expect=7e-160]} {RNA1509_7679} {RNA1310_1262.1} {RNA815_11537} |
| 4. | MligTC455_33275 | 106 | 2.2 | Mlig455_038868 | Neo: - Age: - |
SULT1A2 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_038868 {REF} {Length: 2217} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF00685.29, score=133.6]; Sulfotransferase family [PF13469.8, score=22.8]} {Human: ENSG00000197165, SULT1A2, sulfotransferase family 1A member 2, [Score=113, Expect=1e-28]; ENSG00000173597, SULT1B1, sulfotransferase family 1B member 1, [Score=111, Expect=4e-28]; ENSG00000138068, SULT6B1, sulfotransferase family 6B member 1, [Score=108, Expect=5e-27]} {Mouse: ENSMUSG00000029269, Sult1b1, sulfotransferase family 1B, member 1, [Score=112, Expect=2e-28]; ENSMUSG00000038045, Sult6b1, sulfotransferase family, cytosolic, 6B, member 1, [Score=110, Expect=6e-28]} {Dmel: FBgn0037665, St2, Sulfotransferase 2, [Score=110, Expect=1e-27]} {Smed: dd_Smed_v6_7766_0_1, dd_Smed_v6_7766_0_1, [Score=91.7, Expect=4e-21]} {RNA1509_28198} {RNA1310_25711, RNA1509_28198} {RNA1509_28198, RNA815_26680} |
| 5. | MligTC455_37789 | 16 | 0.34 | Mlig455_002723 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_002723 {REF} {Length: 349} {NoTransDecoderORF} {RNA1310_134759} | |
| 6. | MligTC455_20099 | 15 | 0.32 | Mlig455_037109 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_037109 {REF} {Length: 817} {NoTransDecoderORF} {RNA1310_30726} {RNA815_35778} | |
| 7. | MligTC455_16250 | 53 | 1.1 | Mlig455_025568 | Neo: - Age: - Region-enriched R4: 5.317/0.00598 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_025568 {REF} {Length: 2103} {NoTransDecoderORF} {RNA1509_9817} {RNA1310_52418.1} {RNA815_41133} | |
| 8. | MligTC455_43753 | 82 | 1.71 | Mlig455_018087 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_018087 {REF} {Length: 2050} {RNA1509_20267} {RNA1310_4680} {RNA815_3273} | |
| 9. | MligTC455_54466 | 24 | 0.5 | Mlig455_005145 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_005145 {REF} {Length: 267} {RNA1310_84659} | |
| 10. | MligTC455_46206 | 21 | 0.43 | Mlig455_070839 | Neo: - Age: - |
THOC2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_070839 {REF} {Length: 4753} {TRANSSPLICED} {Pfam: Transcription factor/nuclear export subunit protein 2 [PF11262.10, score=292.4]; THO complex subunit 2 N-terminus [PF16134.7, score=252.7]; Transcription- and export-related complex subunit [PF11732.10, score=77.9]} {Human: ENSG00000125676, THOC2, THO complex 2, [RH, Score=777, Expect=0.0]} {Mouse: ENSMUSG00000079065, BC005561, cDNA sequence BC005561, [RH, Score=788, Expect=0.0]; ENSMUSG00000037475, Thoc2, THO complex 2, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0031390, tho2, [RH, Score=706, Expect=0.0]} {Celegans: WBGene00015813, thoc-2, THO Complex (Transcription factor/nuclear export) subunit, [RH, Score=547, Expect=5e-170]} {Smed: dd_Smed_v6_3159_0_2, dd_Smed_v6_3159_0_2, [RH, Score=769, Expect=0.0]} {RNA1509_3180} {RNA1310_1726} {RNA815_1568} |
| 11. | MligTC455_35116 | 13 | 0.27 | Mlig455_049393 | Neo: - Age: - |
RSBN1L | 0.95 | - | - | - | - | 0.950 | - | Mlig455_049393 {REF} {Length: 1687} {TRANSSPLICED} {Human: ENSG00000187257, RSBN1L, round spermatid basic protein 1 like, [RH, Score=291, Expect=2e-88]; ENSG00000081019, RSBN1, round spermatid basic protein 1, [RH, Score=286, Expect=2e-87]} {Mouse: ENSMUSG00000039968, Rsbn1l, round spermatid basic protein 1-like, [RH, Score=292, Expect=3e-89]; ENSMUSG00000044098, Rsbn1, rosbin, round spermatid basic protein 1, [RH, Score=285, Expect=6e-87]} {Dmel: FBgn0032717, CG10600, [RH, Score=276, Expect=4e-81]} {Celegans: WBGene00001080, dpy-21, Dosage compensation protein dpy-21, [RH, Score=232, Expect=6e-66]} {Smed: dd_Smed_v6_4605_0_1, dd_Smed_v6_4605_0_1, [RH, Score=391, Expect=1e-130]} {RNA1509_10039} {RNA1310_18364, RNA1509_10039} {RNA1509_10039, RNA815_7365} |
Berezikov Lab - 2020-2021 © ERIBA