TomoSeq data search

Data search

Results for MligTC455_43760

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43760

954

19.88

Mlig455_025838, Mlig455_025896

Neo: -

Age: -

Region-enriched R4: 1.962/0.02454
Region-enriched R5: 1.879/0.00399

Mlig455_025838 {REF} {Length: 2490} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.7]; Protein kinase domain [PF00069.27, score=32.7]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=3e-07]} {RNA1509_16893} {RNA1310_23600, RNA1509_16893} {RNA1509_16893, RNA815_10869}

Mlig455_025896 {REF} {Length: 2463} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.6]; Protein kinase domain [PF00069.27, score=33.0]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=4e-07]} {RNA1509_16893, RNA1509_47854, RNA1509_55737} {RNA1310_23600, RNA1509_47854, RNA1509_55737} {RNA1509_47854, RNA1509_55737, RNA815_10869}

Cumulative graph for MligTC455_43760

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.829	4.633	0.00645	0.24904
RegionR2	0.566	4.633	0.51903	0.89385
RegionR3	1.005	4.633	0.15554	0.66691
RegionR4	1.962	4.633	0.00301	0.02454
RegionR5	1.879	4.633	0.00030	0.00399
RegionR6	1.441	4.633	0.01766	0.23628
RegionR7	-0.415	4.633	0.94324	1.00000
RegionR8	1.392	4.633	0.07146	0.51146

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.315	4.633	1.00000	1.00000
RegenerationR2	-0.214	4.633	0.57703	0.90548
RegenerationR3	-0.383	4.633	0.36432	0.77983
RegenerationR4	-0.636	4.633	0.15952	0.59157
RegenerationR5	-0.533	4.633	0.17386	0.60306
RegenerationR6	-0.473	4.633	0.25686	0.60698
RegenerationBL	-0.764	4.633	0.12551	0.42063
RegenerationTP	-0.243	4.633	0.64742	0.98763

Genes with expression patterns similar to MligTC455_43760

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43760	954	19.88	Mlig455_025838, Mlig455_025896	Neo: - Age: - Region-enriched R4: 1.962/0.02454 Region-enriched R5: 1.879/0.00399		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025838 {REF} {Length: 2490} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.7]; Protein kinase domain [PF00069.27, score=32.7]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=3e-07]} {RNA1509_16893} {RNA1310_23600, RNA1509_16893} {RNA1509_16893, RNA815_10869} Mlig455_025896 {REF} {Length: 2463} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.6]; Protein kinase domain [PF00069.27, score=33.0]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=4e-07]} {RNA1509_16893, RNA1509_47854, RNA1509_55737} {RNA1310_23600, RNA1509_47854, RNA1509_55737} {RNA1509_47854, RNA1509_55737, RNA815_10869}
2.	MligTC455_27184	603	12.55	Mlig455_040770	Neo: - Age: -	TMEM19	0.983	-	-	-	-	-	0.983	Mlig455_040770 {REF} {Length: 1063} {Pfam: Integral membrane protein DUF92 [PF01940.18, score=220.2]} {Human: ENSG00000139291, TMEM19, transmembrane protein 19, [Score=215, Expect=7e-68]} {Mouse: ENSMUSG00000069520, Tmem19, transmembrane protein 19, [Score=200, Expect=2e-62]} {Dmel: FBgn0036353, CG10171, [Score=197, Expect=4e-61]} {Smed: dd_Smed_v6_10441_0_1, dd_Smed_v6_10441_0_1, [Score=209, Expect=3e-66]} {RNA1509_13808} {RNA1310_30059} {RNA815_44043}
3.	MligTC455_26764	624	12.99	Mlig455_008365	Neo: Int S/G2/M Age: Up-Down-Down	RAB18	0.961	-	-	-	-	-	0.961	Mlig455_008365 {REF} {Length: 3307} {Pfam: Ras family [PF00071.24, score=191.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=123.4]; ADP-ribosylation factor family [PF00025.23, score=68.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.8]; 50S ribosome-binding GTPase [PF01926.25, score=27.6]; RsgA GTPase [PF03193.18, score=26.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.7]; AAA domain [PF13479.8, score=19.2]; AAA domain [PF13401.8, score=19.1]} {Human: ENSG00000099246, RAB18, RAB18, member RAS oncogene family, [Score=285, Expect=2e-98]} {Mouse: ENSMUSG00000073639, Rab18, RAB18, member RAS oncogene family, [RH, Score=287, Expect=2e-99]} {Dmel: FBgn0015794, Rab18, [RH, Score=193, Expect=1e-62]} {Celegans: WBGene00004277, rab-18, Ras-related protein Rab-18, [RH, Score=262, Expect=8e-90]} {Smed: dd_Smed_v6_4001_0_1, dd_Smed_v6_4001_0_1, [RH, Score=293, Expect=3e-102]} {RNA1509_20021, RNA1509_31021} {RNA1310_12669, RNA1509_20021, RNA1509_31021} {RNA1509_20021, RNA1509_31021, RNA815_9889}
4.	MligTC455_20148	398	8.29	Mlig455_021786	Neo: - Age: - Region-enriched R4: 1.761/0.03047	ATP10D	0.955	-	-	-	-	-	0.955	Mlig455_021786 {REF} {Length: 7703} {TRANSSPLICED} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=219.5]; Phospholipid-translocating ATPase N-terminal [PF16209.7, score=79.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=44.8]; Cation transport ATPase (P-type) [PF13246.8, score=33.5]; E1-E2 ATPase [PF00122.22, score=28.3]; haloacid dehalogenase-like hydrolase [PF08282.14, score=18.6]} {Human: ENSG00000145246, ATP10D, ATPase phospholipid transporting 10D (putative), [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000046808, Atp10d, ATPase, class V, type 10D, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0032120, CG33298, [RH, Score=520, Expect=1e-158]} {Celegans: WBGene00012360, tat-3, Phospholipid-transporting ATPase, [RH, Score=477, Expect=6e-144]} {Smed: dd_Smed_v6_13628_0_1, dd_Smed_v6_13628_0_1, [RH, Score=907, Expect=0.0]} {RNA1509_17940, RNA1509_42926, RNA1509_50131} {RNA1310_1640.1, RNA1509_17940, RNA1509_42926, RNA1509_50131} {RNA1509_17940, RNA1509_42926, RNA1509_50131, RNA815_7549}
5.	MligTC455_46882	387	8.07	Mlig455_041695, Mlig455_041771	Neo: - Age: Down-Up-Down Region-enriched R5: 1.613/0.04960 Regeneration-downregulated BL: -6.783 Regeneration-depleted BL: -6.783		0.955	-	-	-	-	-	0.955	Mlig455_041695 {REF} {Length: 1643} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958, RNA1509_54232} {RNA1509_54232, RNA815_28403} Mlig455_041771 {REF} {Length: 1253} {TRANSSPLICED} {RNA1509_54232} {RNA1310_57958} {RNA815_34368}
6.	MligTC455_52539	80	1.66	Mlig455_023569	Neo: - Age: Up-Down-Down	TULP4	0.953	-	-	-	-	-	0.953	Mlig455_023569 {REF} {Length: 4684} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=244, Expect=3e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=249, Expect=3e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=113, Expect=1e-25]} {RNA1509_41754, RNA1509_9068} {RNA1310_4370.1, RNA1509_41754} {RNA1509_41754, RNA815_13995}
7.	MligTC455_44938	358	7.46	Mlig455_007776	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_007776 {REF} {Length: 2239} {TRANSSPLICED} {RNA1509_16551, RNA1509_53284} {RNA1310_29318, RNA1509_16551, RNA1509_53284} {RNA1509_16551, RNA1509_53284, RNA815_12468}
8.	MligTC455_51014	196	4.08	Mlig455_025046	Neo: - Age: -	CDYL2	0.95	-	-	-	-	-	0.950	Mlig455_025046 {REF} {Length: 6070} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=109.9]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=46.2]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=39.7]} {Human: ENSG00000166446, CDYL2, chromodomain Y like 2, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000031758, Cdyl2, chromodomain protein, Y chromosome-like 2, [RH, Score=132, Expect=3e-32]} {Dmel: FBgn0035169, CG13890, [Score=84.0, Expect=1e-17]} {Celegans: WBGene00001153, ech-4, Enoyl-CoA Hydratase, [Score=85.1, Expect=2e-17]} {Smed: dd_Smed_v6_11720_0_1, dd_Smed_v6_11720_0_1, [RH, Score=152, Expect=2e-38]} {RNA1509_19839} {RNA1310_4755, RNA1509_19839} {RNA1509_19839, RNA815_1353.1}

Berezikov Lab - 2020-2021 © ERIBA