Data search
Results for MligTC455_44938
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44938 | 358 | 7.46 | Mlig455_007776 | Neo: - Age: - |
Mlig455_007776 {REF} {Length: 2239} {TRANSSPLICED} {RNA1509_16551, RNA1509_53284} {RNA1310_29318, RNA1509_16551, RNA1509_53284} {RNA1509_16551, RNA1509_53284, RNA815_12468} |
Cumulative graph for MligTC455_44938
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.196 | 3.339 | 0.05881 | 0.55914 | |
| RegionR2 | -0.866 | 3.339 | 0.12568 | 0.43962 | |
| RegionR3 | -0.387 | 3.339 | 0.38926 | 0.91985 | |
| RegionR4 | 0.14 | 3.339 | 0.78725 | 1.00000 | |
| RegionR5 | -0.33 | 3.339 | 0.41787 | 0.77753 | |
| RegionR6 | -0.219 | 3.339 | 0.63051 | 1.00000 | |
| RegionR7 | 0.135 | 3.339 | 0.83086 | 1.00000 | |
| RegionR8 | -0.67 | 3.339 | 0.49287 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.234 | 3.339 | 0.02214 | 0.58626 | |
| RegenerationR2 | 1.048 | 3.339 | 0.01259 | 0.18282 | |
| RegenerationR3 | 0.401 | 3.339 | 0.40947 | 0.80801 | |
| RegenerationR4 | 0.44 | 3.339 | 0.37369 | 0.79664 | |
| RegenerationR5 | 0.287 | 3.339 | 0.51860 | 0.86868 | |
| RegenerationR6 | 0.081 | 3.339 | 0.87180 | 1.00000 | |
| RegenerationBL | -0.656 | 3.339 | 0.39158 | 0.76010 | |
| RegenerationTP | 0.145 | 3.339 | 0.85052 | 1.00000 |
Genes with expression patterns similar to MligTC455_44938
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44938 | 358 | 7.46 | Mlig455_007776 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007776 {REF} {Length: 2239} {TRANSSPLICED} {RNA1509_16551, RNA1509_53284} {RNA1310_29318, RNA1509_16551, RNA1509_53284} {RNA1509_16551, RNA1509_53284, RNA815_12468} | |
| 2. | MligTC455_29582 | 268 | 5.58 | Mlig455_014652 | Neo: - Age: - Regeneration-downregulated BL: -6.776 Regeneration-depleted BL: -6.776 |
2.423 | - | - | 0.723 | 0.950 | - | 0.750 | Mlig455_014652 {REF} {Length: 2387} {Smed: dd_Smed_v6_9995_0_1, dd_Smed_v6_9995_0_1, [RH, Score=91.3, Expect=1e-20]} {RNA1509_17870} {RNA1310_11287, RNA1509_17870} {RNA1509_17870, RNA815_5700} | |
| 3. | MligTC455_18156 | 296 | 6.17 | Mlig455_022063 | Neo: - Age: Down-Down-Up |
ANGPTL2 | 1.7 | - | - | - | 0.958 | - | 0.742 | Mlig455_022063 {REF} {Length: 1525} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=130.9]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=118, Expect=9e-29]; ENSMUSG00000026938, Fcna, ficolin A, [Score=116, Expect=4e-29]; ENSMUSG00000026725, Tnn, tenascin N, [Score=114, Expect=4e-27]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=113, Expect=3e-27]} {Dmel: FBgn0050280, CG30280, [Score=103, Expect=5e-25]} {Celegans: WBGene00017013, ensh-1, [Score=61.2, Expect=5e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=82.4, Expect=6e-17]} {RNA1509_13380} {RNA1310_23397} {RNA815_10220} |
| 4. | MligTC455_11963 | 43 | 0.9 | Mlig455_038882 | Neo: - Age: - |
1.692 | - | - | - | 0.963 | - | 0.729 | Mlig455_038882 {REF} {Length: 1749} {RNA1310_40220} {RNA815_27849} | |
| 5. | MligTC455_37615 | 43 | 0.89 | Mlig455_009083 | Neo: - Age: - |
SMAD2 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_009083 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=153.2]} {Human: ENSG00000175387, SMAD2, SMAD family member 2, [Score=141, Expect=1e-38]; ENSG00000166949, SMAD3, SMAD family member 3, [Score=140, Expect=1e-40]} {Mouse: ENSMUSG00000024563, Smad2, SMAD family member 2, [Score=141, Expect=8e-39]; ENSMUSG00000032402, Smad3, SMAD family member 3, [Score=140, Expect=7e-39]} {Dmel: FBgn0025800, Smox, Smad on X, [Score=144, Expect=4e-40]} {Celegans: WBGene00004857, sma-3, Dwarfin sma-3, [Score=112, Expect=7e-29]} {Smed: dd_Smed_v6_6050_0_1, dd_Smed_v6_6050_0_1, [Score=131, Expect=7e-36]} {RNA1509_38358, RNA1509_38696} {RNA1310_36628, RNA1509_38358, RNA1509_38696} {RNA1509_38358, RNA1509_38696, RNA815_20293} |
| 6. | MligTC455_42600 | 98 | 2.04 | Mlig455_040635 | Neo: - Age: - |
ZHX1-C8orf76 | 0.965 | 0.965 | - | - | - | - | - | Mlig455_040635 {REF} {Length: 1515} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5588) [PF17826.3, score=64.3]} {Human: ENSG00000259305, ZHX1-C8orf76, ZHX1-C8orf76 readthrough, [RH, Score=65.5, Expect=1e-11]} {Mouse: ENSMUSG00000116094, 9130401M01Rik, RIKEN cDNA 9130401M01 gene, [Score=73.2, Expect=2e-14]; ENSMUSG00000101892, 9130401M01Rik, RIKEN cDNA 9130401M01 gene, [Score=73.2, Expect=2e-14]} {RNA1509_47858} {RNA1310_31212, RNA1509_47858} {RNA1509_47858, RNA815_15529} |
| 7. | MligTC455_18576 | 200 | 4.17 | Mlig455_041583 | Neo: - Age: - |
MTERF3 | 0.964 | 0.964 | - | - | - | - | - | Mlig455_041583 {REF} {Length: 4167} {TRANSSPLICED} {Pfam: mTERF [PF02536.16, score=42.5]} {Human: ENSG00000156469, MTERF3, mitochondrial transcription termination factor 3, [RH, Score=120, Expect=7e-30]} {Mouse: ENSMUSG00000021519, Mterf3, mitochondrial transcription termination factor 3, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0037008, mTerf3, mitochondrial transcription termination factor 3, [RH, Score=119, Expect=2e-30]} {Smed: dd_Smed_v6_10622_0_1, dd_Smed_v6_10622_0_1, [RH, Score=81.3, Expect=9e-17]} {RNA1509_24083, RNA1509_37607} {RNA1310_26958.1, RNA1509_37607} {RNA1509_37607, RNA815_9659} |
| 8. | MligTC455_45013 | 471 | 9.81 | Mlig455_065611 | Neo: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_065611 {REF} {Length: 1561} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=74.4]; Ankyrin repeats (many copies) [PF13637.8, score=71.3]; Ankyrin repeats (many copies) [PF13857.8, score=38.3]; Ankyrin repeat [PF13606.8, score=26.1]} {RNA1509_18001} {RNA1310_24810.2, RNA1509_18001} {RNA1509_18001, RNA815_13888.1} | |
| 9. | MligTC455_43760 | 954 | 19.88 | Mlig455_025838, Mlig455_025896 | Neo: - Age: - Region-enriched R4: 1.962/0.02454 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_025838 {REF} {Length: 2490} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.7]; Protein kinase domain [PF00069.27, score=32.7]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=3e-07]} {RNA1509_16893} {RNA1310_23600, RNA1509_16893} {RNA1509_16893, RNA815_10869} Mlig455_025896 {REF} {Length: 2463} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.6]; Protein kinase domain [PF00069.27, score=33.0]} {Smed: dd_Smed_v6_5192_0_1, dd_Smed_v6_5192_0_1, [Score=50.4, Expect=4e-07]} {RNA1509_16893, RNA1509_47854, RNA1509_55737} {RNA1310_23600, RNA1509_47854, RNA1509_55737} {RNA1509_47854, RNA1509_55737, RNA815_10869} |
|
| 10. | MligTC455_49899 | 208 | 4.34 | Mlig455_018365 | Neo: - Age: - |
MMEL1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_018365 {REF} {Length: 2870} {Pfam: Peptidase family M13 [PF01431.23, score=130.5]; Peptidase family M13 [PF05649.15, score=70.0]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=144, Expect=4e-35]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=144, Expect=4e-35]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=155, Expect=5e-39]} {Dmel: FBgn0027570, Nep2, Neprilysin 2, [Score=135, Expect=9e-33]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=138, Expect=1e-33]} {Smed: dd_Smed_v6_2163_0_1, dd_Smed_v6_2163_0_1, [Score=114, Expect=4e-26]} {RNA1509_38586} {RNA1310_6138, RNA1509_38586} {RNA1509_38586, RNA815_7442} |
Berezikov Lab - 2020-2021 © ERIBA