TomoSeq data search

Data search

Results for MligTC455_43826

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43826

112

2.34

Mlig455_052201

Neo: -

Age: -

GALNT11

Mlig455_052201 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=87.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.7]; Glycosyltransferase like family 2 [PF10111.11, score=20.2]} {Human: ENSG00000178234, GALNT11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=314, Expect=2e-100]} {Mouse: ENSMUSG00000038072, Galnt11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=320, Expect=4e-103]} {Dmel: FBgn0001970, Pgant35A, Polypeptide N-acetylgalactosaminyltransferase 35A, [Score=297, Expect=4e-94]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=282, Expect=1e-88]} {Smed: dd_Smed_v6_5368_1_1, dd_Smed_v6_5368_1_1, [Score=280, Expect=3e-88]} {RNA1509_47595, RNA1509_48506} {RNA1310_16435, RNA1509_47595} {RNA1509_47595, RNA815_21659}

Cumulative graph for MligTC455_43826

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.004	2.145	0.45562	1.00000
RegionR2	0.469	2.145	0.66524	0.99562
RegionR3	-0.266	2.145	0.92430	1.00000
RegionR4	1.116	2.145	0.31847	0.63470
RegionR5	0.534	2.145	0.57233	0.93066
RegionR6	0.263	2.145	0.75178	1.00000
RegionR7	1.38	2.145	0.23703	0.86068
RegionR8	0.509	2.145	0.70089	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.011	2.145	0.99995	1.00000
RegenerationR2	-0.518	2.145	0.47959	0.86327
RegenerationR3	0.623	2.145	0.42757	0.81951
RegenerationR4	-0.256	2.145	0.74535	0.96958
RegenerationR5	0.529	2.145	0.40451	0.80173
RegenerationR6	0.005	2.145	0.99101	1.00000
RegenerationBL	0.541	2.145	0.58000	0.93209
RegenerationTP	-0.547	2.145	0.62988	0.97771

Genes with expression patterns similar to MligTC455_43826

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43826	112	2.34	Mlig455_052201	Neo: - Age: -	GALNT11	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052201 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=87.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.7]; Glycosyltransferase like family 2 [PF10111.11, score=20.2]} {Human: ENSG00000178234, GALNT11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=314, Expect=2e-100]} {Mouse: ENSMUSG00000038072, Galnt11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=320, Expect=4e-103]} {Dmel: FBgn0001970, Pgant35A, Polypeptide N-acetylgalactosaminyltransferase 35A, [Score=297, Expect=4e-94]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=282, Expect=1e-88]} {Smed: dd_Smed_v6_5368_1_1, dd_Smed_v6_5368_1_1, [Score=280, Expect=3e-88]} {RNA1509_47595, RNA1509_48506} {RNA1310_16435, RNA1509_47595} {RNA1509_47595, RNA815_21659}
2.	MligTC455_44540	112	2.33	Mlig455_018261	Neo: - Age: -		0.977	-	-	0.977	-	-	-	Mlig455_018261 {REF} {Length: 4292} {TRANSSPLICED} {Celegans: WBGene00009534, F38B7.3, [Score=57.4, Expect=1e-08]} {RNA1509_39339} {RNA1310_15513} {RNA815_20708}
3.	MligTC455_38854	30	0.62	Mlig455_014674	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_014674 {REF} {Length: 1824} {RNA1509_39463} {RNA1310_39338} {RNA815_20734.1}
4.	MligTC455_47279	470	9.79	Mlig455_026752, Mlig455_051742, Mlig455_051771	Neo: Int S/G2/M Age: -	PUS1	0.967	-	-	-	0.967	-	-	Mlig455_026752 {REF} {Length: 2564} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=44.5]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=2e-91]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=1e-91]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=220, Expect=2e-67]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=318, Expect=1e-106]} {RNA1509_10920} {RNA1310_16930, RNA1509_10920} {RNA1509_10920, RNA815_10919.1} Mlig455_051742 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=33.3]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=252, Expect=9e-80]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=246, Expect=7e-78]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=251, Expect=9e-80]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=191, Expect=1e-56]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=286, Expect=4e-94]} {RNA1509_10920} {RNA1310_16930} {RNA815_10919.1} Mlig455_051771 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=45.0]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=3e-93]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=280, Expect=1e-90]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=2e-93]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=225, Expect=2e-69]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=315, Expect=3e-105]} {RNA1509_10920, RNA1509_50713} {RNA1310_16930, RNA1509_50713} {RNA1509_50713, RNA815_10919.1}
5.	MligTC455_28676	328	6.82	Mlig455_001111	Neo: - Age: - Region-enriched R6: 5.263/0.00000	SLC5A8	0.964	-	-	-	0.964	-	-	Mlig455_001111 {REF} {Length: 1680} {Pfam: Sodium:solute symporter family [PF00474.19, score=23.9]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=127, Expect=4e-32]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=127, Expect=4e-32]; ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=122, Expect=3e-30]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=128, Expect=1e-32]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=127, Expect=2e-32]} {Dmel: FBgn0250757, CG42235, [Score=99.4, Expect=1e-22]} {RNA1509_12386} {RNA1310_9016} {RNA815_2751}
6.	MligTC455_28677	266	5.53	Mlig455_001116	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.215 Region-enriched R6: 4.924/0.00002	SLC5A8	0.963	-	-	-	0.963	-	-	Mlig455_001116 {REF} {Length: 2699} {Pfam: Sodium:solute symporter family [PF00474.19, score=114.7]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=2e-117]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=2e-117]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=360, Expect=7e-115]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=345, Expect=4e-109]} {Dmel: FBgn0250757, CG42235, [RH, Score=309, Expect=2e-94]} {Celegans: WBGene00014092, ZK822.5, [Score=213, Expect=4e-60]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=320, Expect=3e-100]} {RNA1509_31511, RNA1509_50518} {RNA1310_10670, RNA1509_50518} {RNA1509_50518, RNA815_2751}
7.	MligTC455_20593	717	14.93	Mlig455_013609	Neo: - Age: -	TVP23B	0.957	-	-	-	-	-	0.957	Mlig455_013609 {REF} {Length: 2266} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF846) [PF05832.14, score=165.1]} {Human: ENSG00000171928, TVP23B, trans-golgi network vesicle protein 23 homolog B, [RH, Score=184, Expect=3e-58]; ENSG00000175106, TVP23C, trans-golgi network vesicle protein 23 homolog C, [RH, Score=184, Expect=6e-58]} {Mouse: ENSMUSG00000014177, Tvp23b, trans-golgi network vesicle protein 23B, [RH, Score=186, Expect=7e-59]} {Dmel: FBgn0035944, CG5021, [RH, Score=174, Expect=4e-54]} {Celegans: WBGene00016400, C34D4.4, Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4, [RH, Score=127, Expect=2e-36]} {Smed: dd_Smed_v6_3386_0_1, dd_Smed_v6_3386_0_1, [RH, Score=160, Expect=2e-49]} {RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370} {RNA1310_32400, RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370} {RNA1509_36306, RNA1509_47142, RNA1509_52712, RNA1509_56436, RNA1509_7370, RNA815_15068}
8.	MligTC455_46500	1415	29.48	Mlig455_067708	Neo: - Age: Down-Up-Up	TXNL4A	0.957	-	-	-	-	-	0.957	Mlig455_067708 {REF} {Length: 606} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=56.7]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [Score=90.5, Expect=1e-24]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [Score=90.5, Expect=2e-24]} {Dmel: FBgn0031601, Dim1, [Score=89.7, Expect=3e-24]} {Celegans: WBGene00235102, Y54G2A.75, [Score=91.3, Expect=6e-25]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [Score=98.2, Expect=1e-27]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}
9.	MligTC455_48601	72	1.5	Mlig455_042044	Neo: - Age: -	SLC35E3	0.953	-	-	-	-	-	0.953	Mlig455_042044 {REF} {Length: 1777} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=65.8]; EamA-like transporter family [PF00892.22, score=31.7]; UAA transporter family [PF08449.13, score=23.4]} {Human: ENSG00000175782, SLC35E3, solute carrier family 35 member E3, [RH, Score=293, Expect=2e-98]} {Mouse: ENSMUSG00000060181, Slc35e3, solute carrier family 35, member E3, [RH, Score=289, Expect=6e-97]} {RNA1509_18211} {RNA1310_8738.1, RNA1509_18211} {RNA1509_18211, RNA815_11669}
10.	MligTC455_14911	498	10.38	Mlig455_024924	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_024924 {REF} {Length: 1825} {TRANSSPLICED} {RNA1509_24815, RNA1509_41866} {RNA1310_11114, RNA1509_24815, RNA1509_41866} {RNA1509_24815, RNA1509_41866, RNA815_15710}

Berezikov Lab - 2020-2021 © ERIBA