TomoSeq data search

Data search

Results for MligTC455_47279

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47279

470

9.79

Mlig455_026752, Mlig455_051742, Mlig455_051771

Neo: Int S/G2/M

Age: -

PUS1

Mlig455_026752 {REF} {Length: 2564} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=44.5]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=2e-91]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=1e-91]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=220, Expect=2e-67]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=318, Expect=1e-106]} {RNA1509_10920} {RNA1310_16930, RNA1509_10920} {RNA1509_10920, RNA815_10919.1}

Mlig455_051742 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=33.3]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=252, Expect=9e-80]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=246, Expect=7e-78]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=251, Expect=9e-80]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=191, Expect=1e-56]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=286, Expect=4e-94]} {RNA1509_10920} {RNA1310_16930} {RNA815_10919.1}

Mlig455_051771 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=45.0]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=3e-93]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=280, Expect=1e-90]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=2e-93]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=225, Expect=2e-69]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=315, Expect=3e-105]} {RNA1509_10920, RNA1509_50713} {RNA1310_16930, RNA1509_50713} {RNA1509_50713, RNA815_10919.1}

Cumulative graph for MligTC455_47279

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.696	3.924	0.20392	0.84309
RegionR2	1.899	3.924	0.01341	0.12105
RegionR3	0.321	3.924	0.58064	1.00000
RegionR4	-0.74	3.924	0.32682	0.64462
RegionR5	0.045	3.924	0.95323	1.00000
RegionR6	-1.105	3.924	0.05873	0.45449
RegionR7	1.911	3.924	0.00190	0.05479
RegionR8	-0.636	3.924	0.60352	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.664	3.924	0.54672	1.00000
RegenerationR2	-1.367	3.924	0.06551	0.41875
RegenerationR3	0.485	3.924	0.49404	0.85547
RegenerationR4	-0.214	3.924	0.77079	0.97686
RegenerationR5	0.121	3.924	0.85202	1.00000
RegenerationR6	2.435	3.924	0.00088	0.03213
RegenerationBL	-5.686	3.924	0.01225	0.11325
RegenerationTP	-5.807	3.924	0.00616	0.13190

Genes with expression patterns similar to MligTC455_47279

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47279	470	9.79	Mlig455_026752, Mlig455_051742, Mlig455_051771	Neo: Int S/G2/M Age: -	PUS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026752 {REF} {Length: 2564} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=44.5]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=2e-91]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=283, Expect=1e-91]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=220, Expect=2e-67]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=318, Expect=1e-106]} {RNA1509_10920} {RNA1310_16930, RNA1509_10920} {RNA1509_10920, RNA815_10919.1} Mlig455_051742 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=33.3]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=252, Expect=9e-80]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=246, Expect=7e-78]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=251, Expect=9e-80]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=191, Expect=1e-56]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=286, Expect=4e-94]} {RNA1509_10920} {RNA1310_16930} {RNA815_10919.1} Mlig455_051771 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=45.0]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=3e-93]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [RH, Score=280, Expect=1e-90]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [RH, Score=287, Expect=2e-93]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [RH, Score=225, Expect=2e-69]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [RH, Score=315, Expect=3e-105]} {RNA1509_10920, RNA1509_50713} {RNA1310_16930, RNA1509_50713} {RNA1509_50713, RNA815_10919.1}
2.	MligTC455_48473	1799	37.49	Mlig455_025739	Neo: Int S/G2/M Age: -		1.731	-	-	-	0.780	0.951	-	Mlig455_025739 {REF} {Length: 1910} {TRANSSPLICED} {RNA1509_2480} {RNA1310_15034, RNA1509_2480} {RNA1509_2480, RNA815_5643}
3.	MligTC455_31154	40	0.84	Mlig455_036484	Neo: - Age: Up-Down-Up	UBE3B	0.984	-	-	-	-	0.984	-	Mlig455_036484 {REF} {Length: 5654} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=300.0]} {Human: ENSG00000151148, UBE3B, ubiquitin protein ligase E3B, [RH, Score=817, Expect=0.0]} {Mouse: ENSMUSG00000029577, Ube3b, ubiquitin protein ligase E3B, [RH, Score=814, Expect=0.0]} {Dmel: FBgn0035953, CG5087, [RH, Score=745, Expect=0.0]} {Celegans: WBGene00003898, oxi-1, OXidative stress Induced, [RH, Score=583, Expect=0.0]} {Smed: dd_Smed_v6_9399_0_1, dd_Smed_v6_9399_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_7837} {RNA1310_873} {RNA815_4849.1}
4.	MligTC455_43826	112	2.34	Mlig455_052201	Neo: - Age: -	GALNT11	0.967	-	-	-	0.967	-	-	Mlig455_052201 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=87.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=22.7]; Glycosyltransferase like family 2 [PF10111.11, score=20.2]} {Human: ENSG00000178234, GALNT11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=314, Expect=2e-100]} {Mouse: ENSMUSG00000038072, Galnt11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=320, Expect=4e-103]} {Dmel: FBgn0001970, Pgant35A, Polypeptide N-acetylgalactosaminyltransferase 35A, [Score=297, Expect=4e-94]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=282, Expect=1e-88]} {Smed: dd_Smed_v6_5368_1_1, dd_Smed_v6_5368_1_1, [Score=280, Expect=3e-88]} {RNA1509_47595, RNA1509_48506} {RNA1310_16435, RNA1509_47595} {RNA1509_47595, RNA815_21659}
5.	MligTC455_16243	108	2.26	Mlig455_063048	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_063048 {REF} {Length: 2934} {TRANSSPLICED} {RNA1509_56072} {RNA1310_35648.1, RNA1509_56072} {RNA1509_56072, RNA815_22277}
6.	MligTC455_28677	266	5.53	Mlig455_001116	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.215 Region-enriched R6: 4.924/0.00002	SLC5A8	0.963	-	-	-	0.963	-	-	Mlig455_001116 {REF} {Length: 2699} {Pfam: Sodium:solute symporter family [PF00474.19, score=114.7]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=2e-117]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=367, Expect=2e-117]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=360, Expect=7e-115]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=345, Expect=4e-109]} {Dmel: FBgn0250757, CG42235, [RH, Score=309, Expect=2e-94]} {Celegans: WBGene00014092, ZK822.5, [Score=213, Expect=4e-60]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=320, Expect=3e-100]} {RNA1509_31511, RNA1509_50518} {RNA1310_10670, RNA1509_50518} {RNA1509_50518, RNA815_2751}
7.	MligTC455_32802	82	1.71	Mlig455_058732	Neo: Int S/G2/M Age: -	CLEC16A	0.961	-	-	-	-	0.961	-	Mlig455_058732 {REF} {Length: 5696} {TRANSSPLICED} {Pfam: CLEC16A C-terminal [PF19439.1, score=338.2]; Uncharacterised conserved protein [PF09758.11, score=191.5]} {Human: ENSG00000038532, CLEC16A, C-type lectin domain containing 16A, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000068663, Clec16a, C-type lectin domain family 16, member A, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0038427, ema, endosomal maturation defective, [RH, Score=692, Expect=0.0]} {Celegans: WBGene00001660, gop-1, Protein CLEC16A homolog, [RH, Score=310, Expect=4e-89]} {Smed: dd_Smed_v6_3621_0_1, dd_Smed_v6_3621_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_19027} {RNA1310_5561.1} {RNA815_6181}
8.	MligTC455_45451	172	3.59	Mlig455_053394	Neo: Int S/G2/M Age: -		0.961	-	-	-	-	0.961	-	Mlig455_053394 {REF} {Length: 5274} {TRANSSPLICED} {RNA1509_37721, RNA1509_38123, RNA1509_58240} {RNA1310_18023, RNA1509_37721, RNA1509_38123, RNA1509_58240} {RNA1509_37721, RNA1509_38123, RNA1509_58240, RNA815_8000}
9.	MligTC455_25693	520	10.83	Mlig455_022160	Neo: Int S/G2/M Age: -	PBK	0.959	-	-	-	-	0.959	-	Mlig455_022160 {REF} {Length: 3556} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=108.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.0]; Kinase-like [PF14531.8, score=25.6]} {Human: ENSG00000168078, PBK, PDZ binding kinase, [RH, Score=151, Expect=1e-42]} {Mouse: ENSMUSG00000022033, Pbk, PDZ binding kinase, [RH, Score=145, Expect=1e-40]} {Dmel: FBgn0030864, CG8173, [RH, Score=155, Expect=1e-43]} {Celegans: WBGene00017033, nekl-4, Serine/threonine-protein kinase D1044.8, [Score=92.4, Expect=2e-20]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=84.7, Expect=5e-18]} {RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342} {RNA1310_28898, RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342} {RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342, RNA815_22190}
10.	MligTC455_49682	209	4.35	Mlig455_048826	Neo: - Age: - Region-enriched R4: 2.912/0.01142	SLC28A3	0.956	-	-	-	-	-	0.956	Mlig455_048826 {REF} {Length: 4426} {Pfam: Na+ dependent nucleoside transporter C-terminus [PF07662.15, score=237.5]; Na+ dependent nucleoside transporter N-terminus [PF01773.22, score=69.5]} {Human: ENSG00000197506, SLC28A3, solute carrier family 28 member 3, [Score=362, Expect=9e-116]} {Mouse: ENSMUSG00000021553, Slc28a3, solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, [Score=362, Expect=6e-116]} {Dmel: FBgn0025709, CNT2, Concentrative nucleoside transporter 2, [Score=305, Expect=1e-95]} {Celegans: WBGene00017868, slc-28.2, Sodium/nucleoside cotransporter, [Score=231, Expect=9e-68]} {Smed: dd_Smed_v6_3508_0_1, dd_Smed_v6_3508_0_1, [Score=449, Expect=6e-151]} {RNA1509_9483} {RNA1310_18088.1} {RNA815_2098.1}
11.	MligTC455_06258	59	1.22	Mlig455_010089	Neo: - Age: logFC(26M/2M)=-0.766	QRICH2	0.954	-	-	-	0.954	-	-	Mlig455_010089 {REF} {Length: 3188} {Pfam: Otopetrin [PF03189.15, score=32.0]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=52.8, Expect=3e-06]} {RNA1509_49847} {RNA1310_26077} {RNA815_8765}
12.	MligTC455_28676	328	6.82	Mlig455_001111	Neo: - Age: - Region-enriched R6: 5.263/0.00000	SLC5A8	0.954	-	-	-	0.954	-	-	Mlig455_001111 {REF} {Length: 1680} {Pfam: Sodium:solute symporter family [PF00474.19, score=23.9]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=127, Expect=4e-32]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=127, Expect=4e-32]; ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=122, Expect=3e-30]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=128, Expect=1e-32]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=127, Expect=2e-32]} {Dmel: FBgn0250757, CG42235, [Score=99.4, Expect=1e-22]} {RNA1509_12386} {RNA1310_9016} {RNA815_2751}
13.	MligTC455_44829	435	9.07	Mlig455_065380	Neo: - Age: Down-Up-Up	MED7	0.953	-	-	-	-	0.953	-	Mlig455_065380 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: MED7 protein [PF05983.13, score=117.3]} {Human: ENSG00000155868, MED7, mediator complex subunit 7, [RH, Score=129, Expect=4e-36]} {Mouse: ENSMUSG00000020397, Med7, mediator complex subunit 7, [RH, Score=129, Expect=5e-36]} {Dmel: FBgn0051390, MED7, Mediator complex subunit 7, [RH, Score=120, Expect=1e-32]} {Celegans: WBGene00002324, let-49, Mediator of RNA polymerase II transcription subunit 7, [RH, Score=82.8, Expect=2e-18]} {Smed: dd_Smed_v6_5572_0_1, dd_Smed_v6_5572_0_1, [RH, Score=146, Expect=3e-42]} {RNA1509_24534} {RNA1310_18518.1, RNA1509_24534} {RNA1509_24534, RNA815_16326}
14.	MligTC455_14243	58	1.22	Mlig455_057238	Neo: - Age: -	ETV7	0.952	-	-	-	0.952	-	-	Mlig455_057238 {REF} {Length: 1031} {Pfam: Ets-domain [PF00178.24, score=57.2]} {Human: ENSG00000010030, ETV7, ETS variant 7, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=57.0, Expect=2e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=57.8, Expect=9e-10]} {RNA1310_20084.1} {RNA815_23782.1}
15.	MligTC455_35031	12	0.26	Mlig455_019070, Mlig455_064298	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.885		0.952	-	-	-	0.952	-	-	Mlig455_019070 {REF} {Length: 5629} {TRANSSPLICED} {Pfam: UME (NUC010) domain [PF08064.15, score=20.4]} {Dmel: FBgn0004367, mei-41, meiotic 41, [Score=62.8, Expect=3e-09]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [Score=66.2, Expect=1e-10]} {RNA1509_16317} {RNA1310_11255} {RNA815_33749} Mlig455_064298 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: UME (NUC010) domain [PF08064.15, score=20.4]} {Dmel: FBgn0004367, mei-41, meiotic 41, [Score=62.8, Expect=3e-09]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [Score=66.2, Expect=1e-10]} {RNA1509_16317} {RNA1310_36433} {RNA815_52815}
16.	MligTC455_11756	17	0.36	Mlig455_014593, Mlig455_070709	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_014593 {REF} {Length: 720} {NoTransDecoderORF} Mlig455_070709 {REF} {Length: 712} {NoTransDecoderORF}

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