Data search
Results for MligTC455_43860
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43860 | 438 | 9.13 | Mlig455_005676 | Neo: - Age: - |
HDAC6 | Mlig455_005676 {REF} {Length: 1568} {Pfam: Histone deacetylase domain [PF00850.21, score=271.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=65.0]} {Human: ENSG00000094631, HDAC6, histone deacetylase 6, [Score=283, Expect=1e-84]; ENSG00000068024, HDAC4, histone deacetylase 4, [Score=282, Expect=4e-85]; ENSG00000048052, HDAC9, histone deacetylase 9, [Score=270, Expect=2e-80]} {Mouse: ENSMUSG00000031161, Hdac6, histone deacetylase 6, [Score=310, Expect=1e-95]} {Dmel: FBgn0026428, HDAC6, Histone deacetylase 6, [Score=330, Expect=2e-102]} {Celegans: WBGene00018319, hda-6, Histone deacetylase 6, [Score=310, Expect=4e-96]} {Smed: dd_Smed_v6_1997_0_1, dd_Smed_v6_1997_0_1, [Score=331, Expect=4e-103]} {RNA1509_45359} {RNA1310_4724.1} {RNA815_1890} |
Cumulative graph for MligTC455_43860
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.159 | 3.699 | 0.41975 | 1.00000 | |
| RegionR2 | 0.437 | 3.699 | 0.53122 | 0.90259 | |
| RegionR3 | 0.333 | 3.699 | 0.55901 | 1.00000 | |
| RegionR4 | -0.085 | 3.699 | 0.88980 | 1.00000 | |
| RegionR5 | 0.801 | 3.699 | 0.10301 | 0.31121 | |
| RegionR6 | 0.968 | 3.699 | 0.07766 | 0.51713 | |
| RegionR7 | 0.167 | 3.699 | 0.81084 | 1.00000 | |
| RegionR8 | -1.461 | 3.699 | 0.18418 | 0.77093 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.085 | 3.699 | 0.22240 | 0.95604 | |
| RegenerationR2 | 0.368 | 3.699 | 0.50210 | 0.87217 | |
| RegenerationR3 | 0.626 | 3.699 | 0.28638 | 0.71831 | |
| RegenerationR4 | 0.444 | 3.699 | 0.47749 | 0.85729 | |
| RegenerationR5 | 0.009 | 3.699 | 0.98754 | 1.00000 | |
| RegenerationR6 | 0.089 | 3.699 | 0.87952 | 1.00000 | |
| RegenerationBL | 0.221 | 3.699 | 0.76198 | 1.00000 | |
| RegenerationTP | -0.516 | 3.699 | 0.61189 | 0.96765 |
Genes with expression patterns similar to MligTC455_43860
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43860 | 438 | 9.13 | Mlig455_005676 | Neo: - Age: - |
HDAC6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005676 {REF} {Length: 1568} {Pfam: Histone deacetylase domain [PF00850.21, score=271.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=65.0]} {Human: ENSG00000094631, HDAC6, histone deacetylase 6, [Score=283, Expect=1e-84]; ENSG00000068024, HDAC4, histone deacetylase 4, [Score=282, Expect=4e-85]; ENSG00000048052, HDAC9, histone deacetylase 9, [Score=270, Expect=2e-80]} {Mouse: ENSMUSG00000031161, Hdac6, histone deacetylase 6, [Score=310, Expect=1e-95]} {Dmel: FBgn0026428, HDAC6, Histone deacetylase 6, [Score=330, Expect=2e-102]} {Celegans: WBGene00018319, hda-6, Histone deacetylase 6, [Score=310, Expect=4e-96]} {Smed: dd_Smed_v6_1997_0_1, dd_Smed_v6_1997_0_1, [Score=331, Expect=4e-103]} {RNA1509_45359} {RNA1310_4724.1} {RNA815_1890} |
| 2. | MligTC455_32054 | 384 | 8.01 | Mlig455_015060 | Neo: - Age: - |
C12orf66 | 1.756 | - | - | - | - | 0.786 | 0.970 | Mlig455_015060 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: KICSTOR complex C12orf66 like [PF09404.12, score=205.9]} {Human: ENSG00000174206, C12orf66, chromosome 12 open reading frame 66, [RH, Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000053684, BC048403, cDNA sequence BC048403, [RH, Score=153, Expect=6e-41]} {Smed: dd_Smed_v6_6268_0_1, dd_Smed_v6_6268_0_1, [RH, Score=62.0, Expect=3e-10]} {RNA1509_56753} {RNA1310_18670.1} {RNA815_8138} |
| 3. | MligTC455_45849 | 592 | 12.34 | Mlig455_061348 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.287/0.00077 |
0.968 | - | - | - | 0.968 | - | - | Mlig455_061348 {REF} {Length: 1305} {TRANSSPLICED} {RNA1509_45847, RNA1509_55659, RNA1509_55946} {RNA1310_26076, RNA1509_45847, RNA1509_55659, RNA1509_55946} {RNA1509_45847, RNA1509_55659, RNA1509_55946, RNA815_27506} | |
| 4. | MligTC455_26728 | 326 | 6.8 | Mlig455_070831 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.171/0.00634 |
NUP205 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_070831 {REF} {Length: 7040} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=517.5]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=580, Expect=1e-171]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [Score=565, Expect=3e-166]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [Score=254, Expect=3e-67]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [Score=84.7, Expect=7e-16]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [Score=369, Expect=7e-103]} {RNA1509_7576} {RNA1310_395.1} {RNA815_27319} |
| 5. | MligTC455_53399 | 1311 | 27.32 | Mlig455_000624 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.239 Region-enriched R5: 1.186/0.00070 |
NOP14 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_000624 {REF} {Length: 2599} {Pfam: Nop14-like family [PF04147.14, score=120.8]} {Human: ENSG00000087269, NOP14, NOP14 nucleolar protein, [RH, Score=87.0, Expect=4e-17]} {Mouse: ENSMUSG00000036693, Nop14, NOP14 nucleolar protein, [RH, Score=95.1, Expect=1e-19]} {Dmel: FBgn0010926, l(3)07882, lethal (3) 07882, [RH, Score=77.0, Expect=3e-14]} {Celegans: WBGene00021660, Y48G1A.4, [Score=52.4, Expect=1e-06]} {RNA1509_3372, RNA1509_40021} {RNA1310_10635.2, RNA1509_3372, RNA1509_40021} {RNA1509_3372, RNA1509_40021, RNA815_9085} |
| 6. | MligTC455_48327 | 2347 | 48.9 | Mlig455_046907 | Neo: - Age: Up-Down-Up Regeneration-enriched BL: 1.482 |
EIF2S3 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_046907 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Initiation factor eIF2 gamma, C terminal [PF09173.13, score=114.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=78.7]; Elongation factor Tu domain 2 [PF03144.27, score=44.1]} {Human: ENSG00000130741, EIF2S3, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=741, Expect=0.0]; ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [RH, Score=745, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [RH, Score=678, Expect=0.0]} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1310_16815.1, RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895, RNA815_7319} |
| 7. | MligTC455_31318 | 45 | 0.94 | Mlig455_026755 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_026755 {REF} {Length: 904} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_14078} {RNA815_15623} |
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