Data search


search
Exact
Search

Results for MligTC455_26728

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_26728 326 6.80 Mlig455_070831

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.171/0.00634

NUP205 Mlig455_070831 {REF} {Length: 7040} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=517.5]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=580, Expect=1e-171]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [Score=565, Expect=3e-166]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [Score=254, Expect=3e-67]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [Score=84.7, Expect=7e-16]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [Score=369, Expect=7e-103]} {RNA1509_7576} {RNA1310_395.1} {RNA815_27319}

Cumulative graph for MligTC455_26728

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.048 3.356 0.14706 0.76073
RegionR2 0.683 3.356 0.52437 0.89712
RegionR3 0.685 3.356 0.47466 0.97945
RegionR4 1.024 3.356 0.27091 0.57648
RegionR5 2.171 3.356 0.00055 0.00634
RegionR6 0.334 3.356 0.70313 1.00000
RegionR7 1.027 3.356 0.35131 0.98724
RegionR8 0.123 3.356 0.83422 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.105 3.356 0.99998 1.00000
RegenerationR2 0.54 3.356 0.34613 0.77949
RegenerationR3 0.686 3.356 0.27750 0.71108
RegenerationR4 0.485 3.356 0.41990 0.82565
RegenerationR5 0.377 3.356 0.46113 0.83693
RegenerationR6 1.924 3.356 0.00219 0.05325
RegenerationBL 1.234 3.356 0.10412 0.38100
RegenerationTP -0.481 3.356 0.65744 0.99241


Genes with expression patterns similar to MligTC455_26728

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_26728 326 6.8 Mlig455_070831

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.171/0.00634

NUP205 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_070831 {REF} {Length: 7040} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=517.5]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=580, Expect=1e-171]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [Score=565, Expect=3e-166]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [Score=254, Expect=3e-67]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [Score=84.7, Expect=7e-16]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [Score=369, Expect=7e-103]} {RNA1509_7576} {RNA1310_395.1} {RNA815_27319}
2. MligTC455_49874 1741 36.27 Mlig455_010874

Neo: Irradiation

Age: -

Regeneration-upregulated R6: 1.474

Regeneration-enriched R6: 1.474

WDR75 4.236 0.843 0.722 - 0.956 0.901 0.814 Mlig455_010874 {REF} {Length: 3479} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=19.7]} {Human: ENSG00000115368, WDR75, WD repeat domain 75, [RH, Score=161, Expect=5e-40]} {Mouse: ENSMUSG00000025995, Wdr75, WD repeat domain 75, [RH, Score=142, Expect=4e-34]} {Dmel: FBgn0284251, l(2)05287, lethal (2) 05287, [RH, Score=94.0, Expect=5e-19]} {Smed: dd_Smed_v6_10851_0_1, dd_Smed_v6_10851_0_1, [RH, Score=80.9, Expect=2e-15]} {RNA1509_3469} {RNA1310_3399.1} {RNA815_2983.1}
3. MligTC455_49873 1720 35.83 Mlig455_010846

Neo: -

Age: Down-Down-Up

Regeneration-upregulated R6: 1.542

Regeneration-enriched R6: 1.542

WDR75 4.203 0.853 0.719 - 0.951 0.867 0.813 Mlig455_010846 {REF} {Length: 4136} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=21.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.4]} {Human: ENSG00000115368, WDR75, WD repeat domain 75, [RH, Score=163, Expect=7e-41]} {Mouse: ENSMUSG00000025995, Wdr75, WD repeat domain 75, [RH, Score=143, Expect=1e-34]} {Dmel: FBgn0284251, l(2)05287, lethal (2) 05287, [RH, Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_10851_0_1, dd_Smed_v6_10851_0_1, [RH, Score=79.7, Expect=4e-15]} {RNA1509_3469} {RNA1310_3399.1, RNA1509_3469} {RNA1509_3469, RNA815_2983.1}
4. MligTC455_36144 1899 39.57 Mlig455_029382

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.364

Region-enriched R5: 1.838/0.00000
Region-enriched R4: 1.288/0.00565

KPNA2 3.554 0.838 0.893 - - 0.964 0.859 Mlig455_029382 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=191.5]; Importin beta binding domain [PF01749.22, score=66.2]; HEAT-like repeat [PF13513.8, score=63.2]; Atypical Arm repeat [PF16186.7, score=62.2]; HEAT repeats [PF13646.8, score=51.2]; HEAT repeat [PF02985.24, score=34.0]} {Human: ENSG00000182481, KPNA2, karyopherin subunit alpha 2, [Score=458, Expect=4e-156]} {Mouse: ENSMUSG00000018362, Kpna2, karyopherin (importin) alpha 2, [Score=451, Expect=2e-153]; ENSMUSG00000066878, Gm10184, predicted pseudogene 10184, [Score=451, Expect=2e-153]; ENSMUSG00000027782, Kpna4, karyopherin (importin) alpha 4, [Score=431, Expect=1e-145]} {Dmel: FBgn0267727, Pen, Pendulin, [RH, Score=397, Expect=2e-132]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=376, Expect=1e-124]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=419, Expect=2e-141]} {RNA1509_1276} {RNA1310_8995.1} {RNA815_2897}
5. MligTC455_44108 2515 52.4 Mlig455_014945, Mlig455_045147, Mlig455_045181

Neo: Neoblast, stringent

Age: Down-Up-Up, logFC(26M/2M)=0.297

Region-specific R5: 2.328

Region-enriched R5: 2.074/0.00000

TDP2 3.536 0.903 - - 0.926 0.951 0.756

Mlig455_014945 {REF} {Length: 1215} {Pfam: UBA-like domain [PF14555.8, score=27.9]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=25.5]} {Human: ENSG00000111802, TDP2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=169, Expect=4e-49]} {Mouse: ENSMUSG00000035958, Tdp2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=163, Expect=4e-47]} {Celegans: WBGene00013405, tdpt-1, 5'-tyrosyl-DNA phosphodiesterase, [RH, Score=149, Expect=6e-42]} {Smed: dd_Smed_v6_12962_0_2, dd_Smed_v6_12962_0_2, [RH, Score=177, Expect=5e-53]} {RNA1509_7675} {RNA1310_28437, RNA1509_7675} {RNA1509_7675, RNA815_27699}

Mlig455_045147 {REF} {Length: 1223} {TRANSSPLICED} {Pfam: UBA-like domain [PF14555.8, score=28.7]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=25.5]} {Human: ENSG00000111802, TDP2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=171, Expect=7e-50]} {Mouse: ENSMUSG00000035958, Tdp2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=166, Expect=6e-48]} {Celegans: WBGene00013405, tdpt-1, 5'-tyrosyl-DNA phosphodiesterase, [RH, Score=148, Expect=1e-41]} {Smed: dd_Smed_v6_12962_0_2, dd_Smed_v6_12962_0_2, [RH, Score=178, Expect=1e-53]} {RNA1509_7675} {RNA1310_28437} {RNA815_27699}

Mlig455_045181 {REF} {Length: 1222} {Pfam: UBA-like domain [PF14555.8, score=28.7]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=25.5]} {Human: ENSG00000111802, TDP2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=171, Expect=7e-50]} {Mouse: ENSMUSG00000035958, Tdp2, tyrosyl-DNA phosphodiesterase 2, [RH, Score=166, Expect=6e-48]} {Celegans: WBGene00013405, tdpt-1, 5'-tyrosyl-DNA phosphodiesterase, [RH, Score=148, Expect=1e-41]} {Smed: dd_Smed_v6_12962_0_2, dd_Smed_v6_12962_0_2, [RH, Score=178, Expect=1e-53]} {RNA1509_7675} {RNA1310_28437} {RNA815_27699}
6. MligTC455_11265 5352 111.51 Mlig455_020754, Mlig455_020820, Mlig455_036064

Neo: Int S/G2/M

Age: -

EIF2A 3.395 0.852 0.700 - 0.882 0.961 -

Mlig455_020754 {REF} {Length: 235} {NoTransDecoderORF} {RNA1509_22711} {RNA1310_72032} {RNA815_2839.1}

Mlig455_020820 {REF} {Length: 2711} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_1548} {RNA1310_9127.2} {RNA815_2839.1}

Mlig455_036064 {REF} {Length: 2582} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=202.5]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [RH, Score=407, Expect=3e-135]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [RH, Score=423, Expect=2e-141]} {Dmel: FBgn0037135, CG7414, [RH, Score=355, Expect=1e-114]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [RH, Score=312, Expect=6e-99]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [RH, Score=218, Expect=5e-64]} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1310_9127.2, RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835} {RNA1509_12274, RNA1509_1548, RNA1509_22711, RNA1509_28835, RNA815_2839.1}
7. MligTC455_44796 322 6.71 Mlig455_016168

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.366/0.01937

UBASH3A 3.181 0.762 - - 0.741 0.728 0.950 Mlig455_016168 {REF} {Length: 2883} {Human: ENSG00000160185, UBASH3A, ubiquitin associated and SH3 domain containing A, [Score=97.1, Expect=3e-20]; ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [Score=95.5, Expect=1e-19]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [Score=97.8, Expect=7e-21]; ENSMUSG00000042345, Ubash3a, ubiquitin associated and SH3 domain containing, A, [Score=95.1, Expect=1e-19]} {Dmel: FBgn0039137, CG13604, [Score=108, Expect=3e-24]} {Celegans: WBGene00009962, F53B6.7, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [Score=118, Expect=2e-27]} {RNA1509_26013} {RNA1310_1022.2} {RNA815_2099}
8. MligTC455_11264 2630 54.79 Mlig455_007585

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.309

EIF2A 2.688 0.850 - - 0.880 0.958 - Mlig455_007585 {REF} {Length: 1687} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=92.3]} {Human: ENSG00000144895, EIF2A, eukaryotic translation initiation factor 2A, [Score=186, Expect=4e-52]} {Mouse: ENSMUSG00000027810, Eif2a, eukaryotic translation initiation factor 2A, [Score=186, Expect=6e-52]} {Dmel: FBgn0037135, CG7414, [Score=146, Expect=1e-37]} {Celegans: WBGene00008480, eif-2A, Eukaryotic translation initiation factor 2A, [Score=128, Expect=1e-31]} {Smed: dd_Smed_v6_3705_0_1, dd_Smed_v6_3705_0_1, [Score=79.3, Expect=9e-16]} {RNA1509_12274} {RNA1310_9127.2} {RNA815_2839.1}
9. MligTC455_52368 1098 22.88 Mlig455_051545

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.466/0.00013

TRMT12 2.648 0.862 - - - 0.952 0.834 Mlig455_051545 {REF} {Length: 1953} {Pfam: Met-10+ like-protein [PF02475.18, score=78.7]; Methyltransferase domain [PF13649.8, score=27.2]; Methyltransferase small domain [PF05175.16, score=21.0]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000183665, TRMT12, tRNA methyltransferase 12 homolog, [RH, Score=173, Expect=3e-47]} {Mouse: ENSMUSG00000037085, Trmt12, tRNA methyltranferase 12, [RH, Score=172, Expect=5e-47]} {Celegans: WBGene00009586, F40F9.10, [RH, Score=125, Expect=8e-31]} {Smed: dd_Smed_v6_8323_0_1, dd_Smed_v6_8323_0_1, [RH, Score=150, Expect=1e-40]} {RNA1509_9186} {RNA1310_24249} {RNA815_28668}
10. MligTC455_15067 125 2.6 Mlig455_054151

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 3.089/0.00007

2.645 0.941 - - - 0.747 0.957 Mlig455_054151 {REF} {Length: 3744} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=37.5]; C2H2-type zinc finger [PF13894.8, score=22.6]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=52.8, Expect=4e-07]} {RNA1509_37020, RNA1509_58735} {RNA1310_23296, RNA1509_58735} {RNA1509_58735, RNA815_10259}
11. MligTC455_21851 665 13.85 Mlig455_031575

Neo: -

Age: Down-Down-Up

ALAD 2.613 0.848 - - 0.805 0.960 - Mlig455_031575 {REF} {Length: 1226} {TRANSSPLICED} {Pfam: Delta-aminolevulinic acid dehydratase [PF00490.23, score=389.9]} {Human: ENSG00000148218, ALAD, aminolevulinate dehydratase, [RH, Score=377, Expect=7e-131]} {Mouse: ENSMUSG00000028393, Alad, aminolevulinate, delta-, dehydratase, [RH, Score=369, Expect=7e-128]} {Dmel: FBgn0036271, Pbgs, Porphobilinogen synthase, [RH, Score=330, Expect=1e-112]} {Smed: dd_Smed_v6_6364_0_1, dd_Smed_v6_6364_0_1, [RH, Score=365, Expect=1e-126]} {RNA1509_20362} {RNA1310_26908} {RNA815_12467}
12. MligTC455_53399 1311 27.32 Mlig455_000624

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.239

Region-enriched R5: 1.186/0.00070

NOP14 2.587 0.879 - - 0.950 0.758 - Mlig455_000624 {REF} {Length: 2599} {Pfam: Nop14-like family [PF04147.14, score=120.8]} {Human: ENSG00000087269, NOP14, NOP14 nucleolar protein, [RH, Score=87.0, Expect=4e-17]} {Mouse: ENSMUSG00000036693, Nop14, NOP14 nucleolar protein, [RH, Score=95.1, Expect=1e-19]} {Dmel: FBgn0010926, l(3)07882, lethal (3) 07882, [RH, Score=77.0, Expect=3e-14]} {Celegans: WBGene00021660, Y48G1A.4, [Score=52.4, Expect=1e-06]} {RNA1509_3372, RNA1509_40021} {RNA1310_10635.2, RNA1509_3372, RNA1509_40021} {RNA1509_3372, RNA1509_40021, RNA815_9085}
13. MligTC455_07278 1226 25.54 Mlig455_019894

Neo: Int S/G2/M

Age: Down-Up-Down

Regeneration-upregulated BL: 1.628

Regeneration-enriched BL: 1.628

2.577 - - - 0.779 0.952 0.846 Mlig455_019894 {REF} {Length: 1637} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.7]; CCCH-type zinc finger [PF18044.3, score=19.3]} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1}
14. MligTC455_17762 540 11.25 Mlig455_044636

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.550/0.00255

2.506 0.744 - - 0.812 - 0.950 Mlig455_044636 {REF} {Length: 6526} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=36.3]; Crescentin protein [PF19220.2, score=25.3]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.3]} {RNA1509_3212} {RNA1310_722.1} {RNA815_432.1}
15. MligTC455_42276 177 3.69 Mlig455_056101

Neo: -

Age: -

Region-enriched R4: 3.092/0.01361

MBLAC1 2.476 0.800 - - 0.707 0.969 - Mlig455_056101 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=54.4]; Beta-lactamase superfamily domain [PF12706.9, score=26.4]} {Human: ENSG00000214309, MBLAC1, metallo-beta-lactamase domain containing 1, [RH, Score=112, Expect=1e-29]} {Mouse: ENSMUSG00000049285, Mblac1, metallo-beta-lactamase domain containing 1, [RH, Score=104, Expect=6e-27]} {Dmel: FBgn0031766, CG9117, [RH, Score=100, Expect=1e-25]} {Celegans: WBGene00018738, swip-10, SWimming Induced Paralysis, [RH, Score=82.8, Expect=2e-18]} {Smed: dd_Smed_v6_1825_0_1, dd_Smed_v6_1825_0_1, [RH, Score=138, Expect=1e-40]} {RNA1509_17377, RNA1509_2066} {RNA1310_42602, RNA1509_17377, RNA1509_2066} {RNA1509_17377, RNA1509_2066, RNA815_15524}
16. MligTC455_36597 1013 21.1 Mlig455_018326

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.315

EIF3A 2.423 - 0.741 - 0.954 0.728 - Mlig455_018326 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.4]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=550, Expect=2e-176]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=437, Expect=1e-134]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=550, Expect=4e-179]} {RNA1509_747} {RNA1310_2722} {RNA815_884}
17. MligTC455_44886 664 13.83 Mlig455_009418

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.267/0.00151

1.843 - - - 0.877 - 0.966 Mlig455_009418 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_19251} {RNA1310_6205.2, RNA1509_19251} {RNA1509_19251, RNA815_3904}
18. MligTC455_26245 714 14.87 Mlig455_027693, Mlig455_047757

Neo: Int S/G2/M

Age: -

KIF20B 1.818 - - - - 0.851 0.967

Mlig455_027693 {REF} {Length: 3097} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=279.5]; Microtubule binding [PF16796.7, score=28.2]} {Human: ENSG00000138182, KIF20B, kinesin family member 20B, [Score=277, Expect=3e-78]; ENSG00000112984, KIF20A, kinesin family member 20A, [Score=277, Expect=2e-80]} {Mouse: ENSMUSG00000024795, Kif20b, kinesin family member 20B, [Score=286, Expect=2e-81]; ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=283, Expect=1e-82]} {Dmel: FBgn0003545, sub, subito, [RH, Score=206, Expect=6e-57]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=199, Expect=7e-54]} {Smed: dd_Smed_v6_13972_0_1, dd_Smed_v6_13972_0_1, [RH, Score=285, Expect=1e-82]} {RNA1509_36422} {RNA1310_5809.1} {RNA815_11956}

Mlig455_047757 {REF} {Length: 2745} {Pfam: Kinesin motor domain [PF00225.25, score=272.3]; Microtubule binding [PF16796.7, score=22.9]} {Human: ENSG00000138182, KIF20B, kinesin family member 20B, [Score=250, Expect=4e-70]} {Mouse: ENSMUSG00000024795, Kif20b, kinesin family member 20B, [Score=259, Expect=3e-73]} {Dmel: FBgn0003545, sub, subito, [Score=191, Expect=3e-52]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=190, Expect=4e-51]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=251, Expect=8e-72]} {RNA1509_23272} {RNA1310_5809.1} {RNA815_3599}
19. MligTC455_40366 1075 22.39 Mlig455_003182, Mlig455_003384

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 2.088/0.00106
Region-enriched R4: 1.952/0.01523

WDHD1 1.767 0.801 - - - 0.966 -

Mlig455_003182 {REF} {Length: 5013} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=152.4]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=9e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=137, Expect=1e-32]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=107, Expect=2e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2} {RNA815_1263}

Mlig455_003384 {REF} {Length: 5055} {Pfam: Minichromosome loss protein, Mcl1, middle region [PF12341.10, score=153.6]; WD domain, G-beta repeat [PF00400.34, score=49.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.7]} {Human: ENSG00000198554, WDHD1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=139, Expect=5e-33]} {Mouse: ENSMUSG00000037572, Wdhd1, WD repeat and HMG-box DNA binding protein 1, [RH, Score=138, Expect=7e-33]} {Dmel: FBgn0033890, Ctf4, Chromosome transmission fidelity 4, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00013862, wdr-5.3, WD repeat-containing protein wdr-5.3, [Score=57.4, Expect=3e-08]} {Smed: dd_Smed_v6_19827_0_1, dd_Smed_v6_19827_0_1, [Score=48.5, Expect=1e-05]} {RNA1509_9571} {RNA1310_2526.2, RNA1509_9571} {RNA1509_9571, RNA815_1263}
20. MligTC455_14283 1138 23.71 Mlig455_016581

Neo: Irradiation

Age: -

Region-enriched R4: 1.657/0.00131

1.752 - - - 0.792 0.960 - Mlig455_016581 {REF} {Length: 1964} {TRANSSPLICED} {Smed: dd_Smed_v6_11504_0_1, dd_Smed_v6_11504_0_1, [RH, Score=170, Expect=3e-48]} {RNA1509_13610, RNA1509_4949} {RNA1310_18237, RNA1509_13610, RNA1509_4949} {RNA1509_13610, RNA1509_4949, RNA815_7092}
21. MligTC455_14284 1120 23.33 Mlig455_035596

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.566

Region-enriched R4: 1.689/0.00083

UNG 1.744 - - - 0.787 0.957 - Mlig455_035596 {REF} {Length: 2421} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=50.6]} {Human: ENSG00000076248, UNG, uracil DNA glycosylase, [Score=168, Expect=1e-48]} {Mouse: ENSMUSG00000029591, Ung, uracil DNA glycosylase, [Score=166, Expect=2e-48]} {Celegans: WBGene00013241, ung-1, Uracil-DNA glycosylase, [Score=127, Expect=6e-34]} {Smed: dd_Smed_v6_1568_0_1, dd_Smed_v6_1568_0_1, [Score=142, Expect=3e-40]} {RNA1509_4949} {RNA1310_18237} {RNA815_7092}
22. MligTC455_47753 540 11.25 Mlig455_025424

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 1.577/0.00074

1.724 - - - - 0.770 0.954 Mlig455_025424 {REF} {Length: 1697} {TRANSSPLICED} {RNA1509_20139, RNA1509_33887} {RNA1310_18333, RNA1509_20139, RNA1509_33887} {RNA1509_20139, RNA1509_33887, RNA815_2604}
23. MligTC455_38515 397 8.27 Mlig455_045464

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.290

Region-enriched R5: 1.652/0.00266

CAD 1.72 0.959 - - - - 0.761 Mlig455_045464 {REF} {Length: 8528} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=365.9]; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain [PF02729.23, score=150.0]; Glutamine amidotransferase class-I [PF00117.30, score=140.3]; Carbamoyl-phosphate synthase small chain, CPSase domain [PF00988.24, score=136.6]; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain [PF00185.26, score=97.9]; Carbamoyl-phosphate synthetase large chain, oligomerisation domain [PF02787.21, score=91.5]; ATP-grasp domain [PF02222.24, score=57.9]; MGS-like domain [PF02142.24, score=56.7]; D-ala D-ala ligase C-terminus [PF07478.15, score=55.9]; Amidohydrolase family [PF01979.22, score=50.2]; ATP-grasp in the biosynthetic pathway with Ter operon [PF15632.8, score=43.7]; ATP-grasp domain [PF02655.16, score=24.5]; Peptidase C26 [PF07722.15, score=24.2]; DJ-1/PfpI family [PF01965.26, score=23.3]; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain [PF01071.21, score=21.2]} {Human: ENSG00000084774, CAD, carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, [RH, Score=2667, Expect=0.0]} {Mouse: ENSMUSG00000013629, Cad, carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, [RH, Score=2318, Expect=0.0]} {Dmel: FBgn0003189, r, rudimentary, [RH, Score=2589, Expect=0.0]} {Celegans: WBGene00004259, pyr-1, CAD protein Glutamine-dependent carbamoyl-phosphate synthase Aspartate carbamoyltransferase Dihydroorotase, [RH, Score=2159, Expect=0.0]} {Smed: dd_Smed_v6_7167_0_1, dd_Smed_v6_7167_0_1, [RH, Score=2290, Expect=0.0]} {RNA1509_1847, RNA1509_40342} {RNA1310_314.1, RNA1509_1847, RNA1509_40342} {RNA1509_1847, RNA1509_40342, RNA815_114}
24. MligTC455_13937 387 8.07 Mlig455_028006, Mlig455_028036

Neo: Irradiation

Age: -

Region-enriched R5: 2.460/0.00025

CDC6 1.689 - 0.734 - - - 0.955

Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1}

Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1}
25. MligTC455_39511 2035 42.41 Mlig455_007173

Neo: -

Age: -

GCDH 1.689 - - - 0.739 0.950 - Mlig455_007173 {REF} {Length: 1933} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=102.3]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=91.1]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=74.2]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=26.0]} {Human: ENSG00000105607, GCDH, glutaryl-CoA dehydrogenase, [RH, Score=617, Expect=0.0]} {Mouse: ENSMUSG00000003809, Gcdh, glutaryl-Coenzyme A dehydrogenase, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0031824, CG9547, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00010052, F54D5.7, Probable glutaryl-CoA dehydrogenase, mitochondrial, [RH, Score=513, Expect=0.0]} {Smed: dd_Smed_v6_4416_0_1, dd_Smed_v6_4416_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_11084, RNA1509_17508, RNA1509_18552} {RNA1310_12983.1, RNA1509_11084, RNA1509_17508, RNA1509_18552} {RNA1509_11084, RNA1509_17508, RNA1509_18552, RNA815_4781}
26. MligTC455_51698 365 7.61 Mlig455_028928

Neo: Irradiation

Age: -

Region-enriched R5: 1.818/0.00019

TADA1 1.662 0.959 - - - - 0.703 Mlig455_028928 {REF} {Length: 3298} {Pfam: Transcriptional regulator of RNA polII, SAGA, subunit [PF12767.9, score=36.6]} {Human: ENSG00000152382, TADA1, transcriptional adaptor 1, [RH, Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000026563, Tada1, transcriptional adaptor 1, [RH, Score=57.0, Expect=2e-08]} {RNA1509_27031, RNA1509_50645} {RNA1310_10602.1, RNA1509_27031, RNA1509_50645} {RNA1509_27031, RNA1509_50645, RNA815_2679.1}
27. MligTC455_32132 166 3.46 Mlig455_055925

Neo: Int S/G2/M

Age: -

NCBP3 0.968 - - - - - 0.968 Mlig455_055925 {REF} {Length: 3346} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=58.0]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [Score=59.3, Expect=1e-08]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=65.5, Expect=1e-11]} {RNA1509_30857} {RNA1310_15375} {RNA815_7572}
28. MligTC455_43860 438 9.13 Mlig455_005676

Neo: -

Age: -

HDAC6 0.965 - - - 0.965 - - Mlig455_005676 {REF} {Length: 1568} {Pfam: Histone deacetylase domain [PF00850.21, score=271.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=65.0]} {Human: ENSG00000094631, HDAC6, histone deacetylase 6, [Score=283, Expect=1e-84]; ENSG00000068024, HDAC4, histone deacetylase 4, [Score=282, Expect=4e-85]; ENSG00000048052, HDAC9, histone deacetylase 9, [Score=270, Expect=2e-80]} {Mouse: ENSMUSG00000031161, Hdac6, histone deacetylase 6, [Score=310, Expect=1e-95]} {Dmel: FBgn0026428, HDAC6, Histone deacetylase 6, [Score=330, Expect=2e-102]} {Celegans: WBGene00018319, hda-6, Histone deacetylase 6, [Score=310, Expect=4e-96]} {Smed: dd_Smed_v6_1997_0_1, dd_Smed_v6_1997_0_1, [Score=331, Expect=4e-103]} {RNA1509_45359} {RNA1310_4724.1} {RNA815_1890}
29. MligTC455_44510 380 7.92 Mlig455_016691

Neo: -

Age: Up-Down-Up

Region-enriched R3: 2.041/0.03837
Region-enriched R5: 1.662/0.04104

0.964 - - - - 0.964 - Mlig455_016691 {REF} {Length: 2044} {Pfam: NHL repeat [PF01436.23, score=33.1]} {Dmel: FBgn0265356, tn, thin, [Score=54.7, Expect=2e-07]} {RNA1509_29651} {RNA1310_17074.1, RNA1509_29651} {RNA1509_29651, RNA815_36142}
30. MligTC455_46727 6297 131.18 Mlig455_058812

Neo: -

Age: logFC(26M/2M)=0.222

ACADS 0.964 - - - - 0.964 - Mlig455_058812 {REF} {Length: 1500} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=170.9]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=121.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=90.5]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=80.8]} {Human: ENSG00000122971, ACADS, acyl-CoA dehydrogenase short chain, [RH, Score=535, Expect=0.0]} {Mouse: ENSMUSG00000029545, Acads, acyl-Coenzyme A dehydrogenase, short chain, [RH, Score=529, Expect=0.0]} {Dmel: FBgn0038742, Arc42, [RH, Score=534, Expect=0.0]} {Celegans: WBGene00019433, acdh-3, Acyl CoA DeHydrogenase, [RH, Score=291, Expect=4e-95]} {Smed: dd_Smed_v6_5980_0_1, dd_Smed_v6_5980_0_1, [RH, Score=516, Expect=0.0]} {RNA1509_1565, RNA1509_18468} {RNA1310_17665, RNA1509_1565, RNA1509_18468} {RNA1509_1565, RNA1509_18468, RNA815_7620}
31. MligTC455_16103 1934 40.3 Mlig455_042092, Mlig455_065826

Neo: -

Age: -

HACL1 0.958 - - - - 0.958 -

Mlig455_042092 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain [PF02776.20, score=157.4]; Thiamine pyrophosphate enzyme, central domain [PF00205.24, score=112.3]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=60.4]} {Human: ENSG00000131373, HACL1, 2-hydroxyacyl-CoA lyase 1, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000021884, Hacl1, 2-hydroxyacyl-CoA lyase 1, [RH, Score=578, Expect=0.0]} {Dmel: FBgn0034488, CG11208, [RH, Score=563, Expect=0.0]} {Celegans: WBGene00007143, B0334.3, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_1784_0_1, dd_Smed_v6_1784_0_1, [Score=143, Expect=2e-36]} {RNA1509_23809} {RNA1310_13350.1} {RNA815_9631}

Mlig455_065826 {REF} {Length: 2026} {TRANSSPLICED} {Pfam: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain [PF02776.20, score=159.5]; Thiamine pyrophosphate enzyme, central domain [PF00205.24, score=116.2]} {Human: ENSG00000131373, HACL1, 2-hydroxyacyl-CoA lyase 1, [Score=410, Expect=1e-139]} {Mouse: ENSMUSG00000021884, Hacl1, 2-hydroxyacyl-CoA lyase 1, [Score=403, Expect=7e-137]} {Dmel: FBgn0034488, CG11208, [Score=397, Expect=6e-135]} {Celegans: WBGene00007143, B0334.3, [Score=355, Expect=9e-119]} {Smed: dd_Smed_v6_1784_0_1, dd_Smed_v6_1784_0_1, [Score=114, Expect=2e-27]} {RNA1509_15276, RNA1509_23809} {RNA1310_13350.1, RNA1509_15276, RNA1509_23809} {RNA1509_15276, RNA1509_23809, RNA815_9631}
32. MligTC455_39583 2142 44.62 Mlig455_040053

Neo: Int S/G2/M

Age: -

EIF4EBP2 0.953 - - - - 0.953 - Mlig455_040053 {REF} {Length: 1164} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) [PF05456.13, score=111.3]} {Human: ENSG00000148730, EIF4EBP2, eukaryotic translation initiation factor 4E binding protein 2, [Score=97.4, Expect=3e-26]} {Mouse: ENSMUSG00000020091, Eif4ebp2, eukaryotic translation initiation factor 4E binding protein 2, [Score=94.4, Expect=3e-25]} {Dmel: FBgn0261560, Thor, [Score=67.4, Expect=6e-15]} {Smed: dd_Smed_v6_1204_0_1, dd_Smed_v6_1204_0_1, [Score=76.6, Expect=6e-19]} {RNA1509_10854, RNA1509_14411, RNA1509_17731, RNA1509_4333, RNA1509_44501} {RNA1310_29698, RNA1509_10854, RNA1509_14411, RNA1509_17731, RNA1509_4333, RNA1509_44501} {RNA1509_10854, RNA1509_14411, RNA1509_17731, RNA1509_4333, RNA1509_44501, RNA815_11889.1}
33. MligTC455_53080 183 3.81 Mlig455_033529

Neo: Irradiation

Age: Up-Down-Up

FANCD2 0.953 0.953 - - - - - Mlig455_033529 {REF} {Length: 5286} {TRANSSPLICED} {Pfam: Fanconi anaemia protein FancD2 nuclease [PF14631.8, score=216.3]} {Human: ENSG00000144554, FANCD2, FA complementation group D2, [RH, Score=131, Expect=6e-30]} {Mouse: ENSMUSG00000034023, Fancd2, Fanconi anemia, complementation group D2, [RH, Score=132, Expect=2e-30]} {Smed: dd_Smed_v6_12881_0_1, dd_Smed_v6_12881_0_1, [RH, Score=70.9, Expect=5e-12]} {RNA1509_14338, RNA1509_52086, RNA1509_57752} {RNA1310_1038, RNA1509_14338, RNA1509_52086, RNA1509_57752} {RNA1509_14338, RNA1509_52086, RNA1509_57752, RNA815_21338}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA