Data search
Results for MligTC455_44140
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44140 | 271 | 5.65 | Mlig455_001281 | Neo: - Age: - |
SGPP1 | Mlig455_001281 {REF} {Length: 2814} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=66.2]; PAP2 superfamily [PF14378.8, score=22.6]} {Human: ENSG00000285281, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]; ENSG00000126821, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]} {Mouse: ENSMUSG00000021054, Sgpp1, sphingosine-1-phosphate phosphatase 1, [Score=257, Expect=7e-81]} {Smed: dd_Smed_v6_4050_0_1, dd_Smed_v6_4050_0_1, [Score=153, Expect=2e-42]} {RNA1509_26836} {RNA1310_22538, RNA1509_26836} {RNA1509_26836, RNA815_4160} |
Cumulative graph for MligTC455_44140
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.19 | 2.946 | 0.44259 | 1.00000 | |
| RegionR2 | 1.573 | 2.946 | 0.00673 | 0.07807 | |
| RegionR3 | -0.158 | 2.946 | 0.76708 | 1.00000 | |
| RegionR4 | -0.106 | 2.946 | 0.84514 | 1.00000 | |
| RegionR5 | 0.23 | 2.946 | 0.60380 | 0.96117 | |
| RegionR6 | 0.319 | 2.946 | 0.53885 | 1.00000 | |
| RegionR7 | -0.521 | 2.946 | 0.49529 | 1.00000 | |
| RegionR8 | -0.147 | 2.946 | 0.87007 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.182 | 2.946 | 0.34763 | 1.00000 | |
| RegenerationR2 | -1.202 | 2.946 | 0.00637 | 0.12757 | |
| RegenerationR3 | 0.148 | 2.946 | 0.78123 | 0.97607 | |
| RegenerationR4 | -0.348 | 2.946 | 0.50568 | 0.87206 | |
| RegenerationR5 | 0.02 | 2.946 | 0.96197 | 1.00000 | |
| RegenerationR6 | -0.292 | 2.946 | 0.59921 | 0.86822 | |
| RegenerationBL | -0.218 | 2.946 | 0.78207 | 1.00000 | |
| RegenerationTP | -0.355 | 2.946 | 0.69180 | 1.00000 |
Genes with expression patterns similar to MligTC455_44140
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44140 | 271 | 5.65 | Mlig455_001281 | Neo: - Age: - |
SGPP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001281 {REF} {Length: 2814} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=66.2]; PAP2 superfamily [PF14378.8, score=22.6]} {Human: ENSG00000285281, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]; ENSG00000126821, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]} {Mouse: ENSMUSG00000021054, Sgpp1, sphingosine-1-phosphate phosphatase 1, [Score=257, Expect=7e-81]} {Smed: dd_Smed_v6_4050_0_1, dd_Smed_v6_4050_0_1, [Score=153, Expect=2e-42]} {RNA1509_26836} {RNA1310_22538, RNA1509_26836} {RNA1509_26836, RNA815_4160} |
| 2. | MligTC455_36584 | 1177 | 24.51 | Mlig455_011533, Mlig455_049984 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_011533 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=19.6]} {RNA1509_29499} {RNA1310_32403} {RNA815_16915.1} Mlig455_049984 {REF} {Length: 1918} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=20.3]} {RNA1509_29499, RNA1509_50788} {RNA1310_32403, RNA1509_50788} {RNA1509_50788, RNA815_16915.1} |
|
| 3. | MligTC455_13172 | 117 | 2.43 | Mlig455_047934 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_047934 {REF} {Length: 1321} {NoTransDecoderORF} {RNA1310_145358} | |
| 4. | MligTC455_42622 | 818 | 17.05 | Mlig455_002600 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-upregulated BL: 1.616 Regeneration-enriched BL: 1.616 |
RBM17 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_002600 {REF} {Length: 1563} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=48.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.0]} {Human: ENSG00000134453, RBM17, RNA binding motif protein 17, [RH, Score=199, Expect=4e-59]} {Mouse: ENSMUSG00000037197, Rbm17, RNA binding motif protein 17, [RH, Score=197, Expect=7e-59]} {Dmel: FBgn0086683, Spf45, [RH, Score=160, Expect=5e-45]} {Celegans: WBGene00010233, F58B3.7, [RH, Score=119, Expect=4e-30]} {Smed: dd_Smed_v6_4530_0_1, dd_Smed_v6_4530_0_1, [RH, Score=234, Expect=5e-74]} {RNA1509_10111} {RNA1310_21374, RNA1509_10111} {RNA1509_10111, RNA815_7888} |
Berezikov Lab - 2020-2021 © ERIBA