Data search
Results for MligTC455_36584
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36584 | 1177 | 24.51 | Mlig455_011533, Mlig455_049984 | Neo: - Age: - |
Mlig455_011533 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=19.6]} {RNA1509_29499} {RNA1310_32403} {RNA815_16915.1} Mlig455_049984 {REF} {Length: 1918} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=20.3]} {RNA1509_29499, RNA1509_50788} {RNA1310_32403, RNA1509_50788} {RNA1509_50788, RNA815_16915.1} |
Cumulative graph for MligTC455_36584
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.818 | 4.865 | 0.03030 | 0.44598 | |
| RegionR2 | 0.368 | 4.865 | 0.38685 | 0.78111 | |
| RegionR3 | 0.629 | 4.865 | 0.07064 | 0.46979 | |
| RegionR4 | -0.003 | 4.865 | 0.99475 | 1.00000 | |
| RegionR5 | 0.808 | 4.865 | 0.01172 | 0.06477 | |
| RegionR6 | 0.246 | 4.865 | 0.49647 | 1.00000 | |
| RegionR7 | 0.284 | 4.865 | 0.47263 | 1.00000 | |
| RegionR8 | -0.513 | 4.865 | 0.31064 | 0.94314 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.412 | 4.865 | 0.04723 | 0.68668 | |
| RegenerationR2 | -0.041 | 4.865 | 0.91735 | 1.00000 | |
| RegenerationR3 | -0.512 | 4.865 | 0.21442 | 0.65088 | |
| RegenerationR4 | -0.07 | 4.865 | 0.86682 | 1.00000 | |
| RegenerationR5 | -0.572 | 4.865 | 0.14832 | 0.56539 | |
| RegenerationR6 | 0.104 | 4.865 | 0.80544 | 0.98010 | |
| RegenerationBL | -0.894 | 4.865 | 0.06649 | 0.30035 | |
| RegenerationTP | 0.445 | 4.865 | 0.33383 | 0.77807 |
Genes with expression patterns similar to MligTC455_36584
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36584 | 1177 | 24.51 | Mlig455_011533, Mlig455_049984 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011533 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=19.6]} {RNA1509_29499} {RNA1310_32403} {RNA815_16915.1} Mlig455_049984 {REF} {Length: 1918} {TRANSSPLICED} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=20.3]} {RNA1509_29499, RNA1509_50788} {RNA1310_32403, RNA1509_50788} {RNA1509_50788, RNA815_16915.1} |
|
| 2. | MligTC455_09112 | 179 | 3.73 | Mlig455_032061 | Neo: - Age: Down-Up-Up |
1.727 | - | - | - | - | 0.768 | 0.959 | Mlig455_032061 {REF} {Length: 945} {RNA1509_33478} {RNA1310_75644} {RNA815_39109} | |
| 3. | MligTC455_53840 | 438 | 9.13 | Mlig455_015623 | Neo: - Age: - |
1.692 | - | - | - | 0.952 | - | 0.740 | Mlig455_015623 {REF} {Length: 540} {NoTransDecoderORF} {RNA1509_34124} {RNA1310_12616.2} {RNA815_94.1} | |
| 4. | MligTC455_46107 | 48 | 0.99 | Mlig455_059438 | Neo: - Age: - |
NEUROD1 | 1.669 | - | - | - | - | 0.968 | 0.701 | Mlig455_059438 {REF} {Length: 2657} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=55.6]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=64.3, Expect=9e-11]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=63.2, Expect=7e-11]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.6, Expect=9e-10]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=6e-10]} {Mouse: ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=65.1, Expect=7e-12]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=64.3, Expect=6e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=63.2, Expect=6e-11]; ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=62.4, Expect=2e-10]; ENSMUSG00000026735, Ptf1a, pancreas specific transcription factor, 1a, [Score=62.0, Expect=3e-10]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=55.5, Expect=9e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=67.4, Expect=4e-13]} {RNA1509_59553} {RNA1310_27559} {RNA815_43865.1} |
| 5. | MligTC455_08384 | 507 | 10.55 | Mlig455_031462 | Neo: - Age: - Region-enriched R4: 1.525/0.03851 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_031462 {REF} {Length: 730} {TRANSSPLICED} {RNA1509_45183} {RNA1310_34628.2, RNA1509_45183} {RNA1509_45183, RNA815_54772} | |
| 6. | MligTC455_29968 | 40 | 0.83 | Mlig455_061290 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_061290 {REF} {Length: 1762} {Pfam: Protein of unknown function DUF16 [PF01519.18, score=19.4]} {RNA1509_49894} {RNA1310_436.1, RNA1509_49894} {RNA1509_49894, RNA815_16288} | |
| 7. | MligTC455_15494 | 299 | 6.23 | Mlig455_003802 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_003802 {REF} {Length: 2576} {RNA1509_23541} {RNA1310_23341.1} {RNA815_11967.1} | |
| 8. | MligTC455_40284 | 142 | 2.97 | Mlig455_045795 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_045795 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_13078} | |
| 9. | MligTC455_44140 | 271 | 5.65 | Mlig455_001281 | Neo: - Age: - |
SGPP1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_001281 {REF} {Length: 2814} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=66.2]; PAP2 superfamily [PF14378.8, score=22.6]} {Human: ENSG00000285281, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]; ENSG00000126821, SGPP1, sphingosine-1-phosphate phosphatase 1, [Score=258, Expect=5e-81]} {Mouse: ENSMUSG00000021054, Sgpp1, sphingosine-1-phosphate phosphatase 1, [Score=257, Expect=7e-81]} {Smed: dd_Smed_v6_4050_0_1, dd_Smed_v6_4050_0_1, [Score=153, Expect=2e-42]} {RNA1509_26836} {RNA1310_22538, RNA1509_26836} {RNA1509_26836, RNA815_4160} |
| 10. | MligTC455_47831 | 377 | 7.85 | Mlig455_032620, Mlig455_038960 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_032620 {REF} {Length: 393} {NoTransDecoderORF} {RNA1509_18639} {RNA1310_33797} {RNA815_16712} Mlig455_038960 {REF} {Length: 280} {NoTransDecoderORF} {RNA1509_12633} {RNA1310_33797} {RNA815_16712} |
|
| 11. | MligTC455_47978 | 338 | 7.05 | Mlig455_029027 | Neo: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_029027 {REF} {Length: 2509} {RNA1509_33577, RNA1509_55410} {RNA1310_26945, RNA1509_33577, RNA1509_55410} {RNA1509_33577, RNA1509_55410, RNA815_10135.1} | |
| 12. | MligTC455_22572 | 299 | 6.24 | Mlig455_006773 | Neo: - Age: logFC(26M/2M)=-0.423 Region-enriched R7: 2.258/0.00949 |
TRPM3 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_006773 {REF} {Length: 6013} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=78.5]; Ankyrin repeats (3 copies) [PF12796.9, score=73.4]; Ankyrin repeat [PF13606.8, score=51.5]; Ankyrin repeat [PF00023.32, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Ion transport protein [PF00520.33, score=24.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=74.3, Expect=9e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=74.3, Expect=6e-13]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.4, Expect=2e-19]} {RNA1509_13443} {RNA1310_23388} {RNA815_3717.1} |
| 13. | MligTC455_33882 | 644 | 13.41 | Mlig455_055943 | Neo: - Age: - |
STX12 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_055943 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: SNARE domain [PF05739.21, score=62.2]; Syntaxin-like protein [PF14523.8, score=58.6]} {Human: ENSG00000117758, STX12, syntaxin 12, [Score=132, Expect=1e-36]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [Score=126, Expect=1e-34]; ENSMUSG00000028879, Stx12, syntaxin 12, [Score=125, Expect=2e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [Score=108, Expect=8e-28]} {Celegans: WBGene00009478, syx-7, SYntaXin, [Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [Score=107, Expect=4e-28]} {RNA1509_15629, RNA1509_38250, RNA1509_55825} {RNA1310_27494, RNA1509_15629, RNA1509_55825} {RNA1509_15629, RNA1509_55825, RNA815_14197} |
| 14. | MligTC455_18378 | 93 | 1.93 | Mlig455_020161 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_020161 {REF} {Length: 1611} {RNA1509_32268, RNA1509_3350, RNA1509_4391, RNA1509_7279} {RNA1310_35840, RNA1509_32268, RNA1509_3350, RNA1509_4391, RNA1509_7279} {RNA1509_32268, RNA1509_3350, RNA1509_4391, RNA1509_7279, RNA815_23985} | |
| 15. | MligTC455_26347 | 238 | 4.96 | Mlig455_024892 | Neo: - Age: Down-Up-Up |
SLC16A9 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_024892 {REF} {Length: 1644} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=100.7]} {Human: ENSG00000165449, SLC16A9, solute carrier family 16 member 9, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000037762, Slc16a9, solute carrier family 16 (monocarboxylic acid transporters), member 9, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00013353, Y59A8B.21, [Score=201, Expect=3e-59]} {Smed: dd_Smed_v6_14825_0_1, dd_Smed_v6_14825_0_1, [Score=362, Expect=1e-121]} {RNA1509_22347} {RNA1310_15525.1} {RNA815_6340} |
| 16. | MligTC455_33588 | 444 | 9.25 | Mlig455_002145, Mlig455_018303, Mlig455_054200 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_002145 {REF} {Length: 349} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36664} {RNA1310_27466.1} {RNA815_13552} Mlig455_018303 {REF} {Length: 348} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36664} {RNA1310_27466.1} {RNA815_10054.2} Mlig455_054200 {REF} {Length: 349} {TRANSSPLICED} {RNA1509_36664} {RNA1310_27466.1} {RNA815_10054.2} |
|
| 17. | MligTC455_20941 | 1033 | 21.52 | Mlig455_016229 | Neo: - Age: - Regeneration-upregulated BL: 1.508 Regeneration-enriched BL: 1.508 |
RNASET2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_016229 {REF} {Length: 1875} {Pfam: Ribonuclease T2 family [PF00445.20, score=146.2]} {Human: ENSG00000026297, RNASET2, ribonuclease T2, [RH, Score=103, Expect=2e-25]} {Mouse: ENSMUSG00000116988, AC164314.2, novel transcript, [RH, Score=112, Expect=4e-29]; ENSMUSG00000095687, Rnaset2a, ribonuclease T2A, [RH, Score=112, Expect=4e-29]; ENSMUSG00000116876, AC122413.2, novel protein, Rnaset2b-Gm1604b readthrough, [RH, Score=112, Expect=4e-29]; ENSMUSG00000094724, Rnaset2b, ribonuclease T2B, [RH, Score=112, Expect=4e-29]} {Dmel: FBgn0010406, RNaseX25, Ribonuclease X25, [RH, Score=108, Expect=4e-27]} {Celegans: WBGene00019624, K10C9.3, [RH, Score=97.4, Expect=2e-23]} {Smed: dd_Smed_v6_6454_0_1, dd_Smed_v6_6454_0_1, [RH, Score=103, Expect=4e-26]} {RNA1509_30855, RNA1509_48421} {RNA1310_7030, RNA1509_30855} {RNA1509_30855, RNA815_7634.1} |
Berezikov Lab - 2020-2021 © ERIBA