TomoSeq data search

Data search

Results for MligTC455_44251

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44251	85	1.77	Mlig455_017749, Mlig455_025726	Neo: - Age: Down-Up-Down		Mlig455_017749 {REF} {Length: 783} {TRANSSPLICED} {RNA1509_58793} {RNA1310_18791} {RNA815_10594.2} Mlig455_025726 {REF} {Length: 269} {NoTransDecoderORF}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_44251

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.25	1.797	0.99969	1.00000
RegionR2	0.109	1.797	0.73089	1.00000
RegionR3	1.231	1.797	0.26496	0.80975
RegionR4	2.262	1.797	0.06302	0.22565
RegionR5	2.19	1.797	0.02102	0.10055
RegionR6	1.727	1.797	0.10458	0.59359
RegionR7	0.922	1.797	0.47670	1.00000
RegionR8	-4.191	1.797	0.99974	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.034	1.797	0.34695	1.00000
RegenerationR2	-1.801	1.797	0.01806	0.22072
RegenerationR3	-1.507	1.797	0.05142	0.39298
RegenerationR4	-0.918	1.797	0.23474	0.68338
RegenerationR5	-0.401	1.797	0.50195	0.85965
RegenerationR6	-3.261	1.797	0.00049	0.02306
RegenerationBL	0.375	1.797	0.70657	1.00000
RegenerationTP	2.019	1.797	0.33256	0.77681

Genes with expression patterns similar to MligTC455_44251

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44251	85	1.77	Mlig455_017749, Mlig455_025726	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017749 {REF} {Length: 783} {TRANSSPLICED} {RNA1509_58793} {RNA1310_18791} {RNA815_10594.2} Mlig455_025726 {REF} {Length: 269} {NoTransDecoderORF}
2.	MligTC455_12420	24	0.51	Mlig455_053370	Neo: - Age: - Region-enriched R3: 4.143/0.00934		0.953	-	-	-	0.953	-	-	Mlig455_053370 {REF} {Length: 488} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_96737}
3.	MligTC455_54124	453	9.43	Mlig455_057229	Neo: - Age: - Region-enriched R6: 2.179/0.02167	LAMA2	0.952	-	-	-	0.952	-	-	Mlig455_057229 {REF} {Length: 1958} {Pfam: Tropomyosin [PF00261.22, score=76.4]; Tropomyosin like [PF12718.9, score=27.4]; Crescentin protein [PF19220.2, score=20.8]} {Human: ENSG00000196569, LAMA2, laminin subunit alpha 2, [Score=48.9, Expect=5e-06]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=55.5, Expect=4e-09]} {RNA1509_20736} {RNA1310_27668, RNA1509_20736} {RNA1509_20736, RNA815_13494}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_44251

1.77

Mlig455_017749, Mlig455_025726

Neo: -

Age: Down-Up-Down

1.000

Mlig455_017749 {REF} {Length: 783} {TRANSSPLICED} {RNA1509_58793} {RNA1310_18791} {RNA815_10594.2}

Mlig455_025726 {REF} {Length: 269} {NoTransDecoderORF}

MligTC455_12420

0.51

Mlig455_053370

Neo: -

Age: -

Region-enriched R3: 4.143/0.00934

0.953

Mlig455_053370 {REF} {Length: 488} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_96737}

MligTC455_54124

453

9.43

Mlig455_057229

Neo: -

Age: -

Region-enriched R6: 2.179/0.02167

LAMA2

0.952

Mlig455_057229 {REF} {Length: 1958} {Pfam: Tropomyosin [PF00261.22, score=76.4]; Tropomyosin like [PF12718.9, score=27.4]; Crescentin protein [PF19220.2, score=20.8]} {Human: ENSG00000196569, LAMA2, laminin subunit alpha 2, [Score=48.9, Expect=5e-06]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=55.5, Expect=4e-09]} {RNA1509_20736} {RNA1310_27668, RNA1509_20736} {RNA1509_20736, RNA815_13494}