TomoSeq data search

Data search

Results for MligTC455_44299

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44299	117	2.44	Mlig455_061138	Neo: - Age: - Region-enriched R4: 3.748/0.04843	CHMP2B	Mlig455_061138 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=126.8]} {Human: ENSG00000083937, CHMP2B, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Mouse: ENSMUSG00000004843, Chmp2b, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Dmel: FBgn0035589, CHMP2B, Charged multivesicular body protein 2b, [RH, Score=185, Expect=3e-59]} {Celegans: WBGene00007216, C01A2.4, [RH, Score=166, Expect=6e-52]} {Smed: dd_Smed_v6_1514_0_1, dd_Smed_v6_1514_0_1, [RH, Score=191, Expect=4e-62]} {RNA1509_4957} {RNA1310_28542.2} {RNA815_12849}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44299

117

2.44

Mlig455_061138

Neo: -

Age: -

Region-enriched R4: 3.748/0.04843

CHMP2B

Mlig455_061138 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=126.8]} {Human: ENSG00000083937, CHMP2B, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Mouse: ENSMUSG00000004843, Chmp2b, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Dmel: FBgn0035589, CHMP2B, Charged multivesicular body protein 2b, [RH, Score=185, Expect=3e-59]} {Celegans: WBGene00007216, C01A2.4, [RH, Score=166, Expect=6e-52]} {Smed: dd_Smed_v6_1514_0_1, dd_Smed_v6_1514_0_1, [RH, Score=191, Expect=4e-62]} {RNA1509_4957} {RNA1310_28542.2} {RNA815_12849}

Cumulative graph for MligTC455_44299

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.806	2.243	1.00000	1.00000
RegionR2	0.77	2.243	0.47006	0.85577
RegionR3	1.811	2.243	0.13772	0.63477
RegionR4	3.748	2.243	0.00733	0.04843
RegionR5	1.367	2.243	0.25490	0.57277
RegionR6	0.732	2.243	0.46515	1.00000
RegionR7	-3.901	2.243	1.00000	1.00000
RegionR8	-2.722	2.243	0.99977	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.577	2.243	1.00000	1.00000
RegenerationR2	-0.729	2.243	0.39437	0.81130
RegenerationR3	-1.234	2.243	0.17967	0.61549
RegenerationR4	-1.388	2.243	0.14567	0.57162
RegenerationR5	0.002	2.243	0.98531	1.00000
RegenerationR6	-0.282	2.243	0.78290	0.96894
RegenerationBL	2.274	2.243	0.22423	0.57328
RegenerationTP	3.761	2.243	0.13238	0.54683

Genes with expression patterns similar to MligTC455_44299

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44299	117	2.44	Mlig455_061138	Neo: - Age: - Region-enriched R4: 3.748/0.04843	CHMP2B	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_061138 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=126.8]} {Human: ENSG00000083937, CHMP2B, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Mouse: ENSMUSG00000004843, Chmp2b, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Dmel: FBgn0035589, CHMP2B, Charged multivesicular body protein 2b, [RH, Score=185, Expect=3e-59]} {Celegans: WBGene00007216, C01A2.4, [RH, Score=166, Expect=6e-52]} {Smed: dd_Smed_v6_1514_0_1, dd_Smed_v6_1514_0_1, [RH, Score=191, Expect=4e-62]} {RNA1509_4957} {RNA1310_28542.2} {RNA815_12849}
2.	MligTC455_50094	148	3.09	Mlig455_042020	Neo: Irradiation Age: - Region-enriched R4: 2.698/0.01391	RNF216	1.733	-	-	-	-	0.950	0.783	Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1}
3.	MligTC455_25021	137	2.86	Mlig455_008215	Neo: - Age: Down-Up-Up		0.96	-	-	-	-	-	0.960	Mlig455_008215 {REF} {Length: 725} {Pfam: Transglutaminase family [PF00868.22, score=45.1]} {Dmel: FBgn0031975, Tg, Transglutaminase, [Score=46.2, Expect=5e-07]} {RNA1509_27288} {RNA1310_46156} {RNA815_13515.1}
4.	MligTC455_39320	163	3.41	Mlig455_018309	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_018309 {REF} {Length: 2050} {TRANSSPLICED} {RNA1509_11827, RNA1509_28254} {RNA1310_11877, RNA1509_11827, RNA1509_28254} {RNA1509_11827, RNA1509_28254, RNA815_4179}