Data search
Results for MligTC455_50094
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50094 | 148 | 3.09 | Mlig455_042020 | Neo: Irradiation Age: - Region-enriched R4: 2.698/0.01391 |
RNF216 | Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1} |
Cumulative graph for MligTC455_50094
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.565 | 2.468 | 0.72104 | 1.00000 | |
| RegionR2 | 0.299 | 2.468 | 0.66283 | 0.99382 | |
| RegionR3 | 0.161 | 2.468 | 0.72541 | 1.00000 | |
| RegionR4 | 2.698 | 2.468 | 0.00145 | 0.01391 | |
| RegionR5 | 1.366 | 2.468 | 0.07143 | 0.24167 | |
| RegionR6 | -0.571 | 2.468 | 0.94799 | 1.00000 | |
| RegionR7 | 0.491 | 2.468 | 0.59997 | 1.00000 | |
| RegionR8 | -5.01 | 2.468 | 0.11058 | 0.61761 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.35 | 2.468 | 0.36971 | 1.00000 | |
| RegenerationR2 | -0.441 | 2.468 | 0.49891 | 0.87110 | |
| RegenerationR3 | 0.59 | 2.468 | 0.41690 | 0.81299 | |
| RegenerationR4 | -0.944 | 2.468 | 0.18509 | 0.62629 | |
| RegenerationR5 | -0.004 | 2.468 | 0.99444 | 1.00000 | |
| RegenerationR6 | 1.374 | 2.468 | 0.09058 | 0.37468 | |
| RegenerationBL | 2.649 | 2.468 | 0.04420 | 0.24044 | |
| RegenerationTP | 1.981 | 2.468 | 0.34074 | 0.78445 |
Genes with expression patterns similar to MligTC455_50094
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50094 | 148 | 3.09 | Mlig455_042020 | Neo: Irradiation Age: - Region-enriched R4: 2.698/0.01391 |
RNF216 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1} |
| 2. | MligTC455_30072 | 119 | 2.48 | Mlig455_004854 | Neo: - Age: - |
TOP3A | 1.787 | - | - | - | 0.826 | - | 0.961 | Mlig455_004854 {REF} {Length: 4031} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]; ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=942, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [Score=945, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=640, Expect=0.0]} {RNA1509_11005, RNA1509_45373} {RNA1310_4689.1, RNA1509_45373} {RNA1509_45373, RNA815_5623} |
| 3. | MligTC455_44299 | 117 | 2.44 | Mlig455_061138 | Neo: - Age: - Region-enriched R4: 3.748/0.04843 |
CHMP2B | 1.733 | - | - | - | - | 0.950 | 0.783 | Mlig455_061138 {REF} {Length: 1258} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=126.8]} {Human: ENSG00000083937, CHMP2B, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Mouse: ENSMUSG00000004843, Chmp2b, charged multivesicular body protein 2B, [RH, Score=223, Expect=7e-74]} {Dmel: FBgn0035589, CHMP2B, Charged multivesicular body protein 2b, [RH, Score=185, Expect=3e-59]} {Celegans: WBGene00007216, C01A2.4, [RH, Score=166, Expect=6e-52]} {Smed: dd_Smed_v6_1514_0_1, dd_Smed_v6_1514_0_1, [RH, Score=191, Expect=4e-62]} {RNA1509_4957} {RNA1310_28542.2} {RNA815_12849} |
| 4. | MligTC455_13959 | 747 | 15.56 | Mlig455_003610, Mlig455_041582 | Neo: - Age: logFC(26M/2M)=0.281 Region-enriched R3: 1.201/0.04227 |
GK3P | 1.704 | - | - | - | - | 0.735 | 0.969 | Mlig455_003610 {REF} {Length: 2428} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=185.3]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=506, Expect=9e-175]; ENSG00000198814, GK, glycerol kinase, [RH, Score=504, Expect=3e-174]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=489, Expect=4e-168]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=512, Expect=3e-177]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=493, Expect=7e-170]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=490, Expect=8e-169]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=521, Expect=0.0]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=501, Expect=5e-174]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=463, Expect=2e-159]} {RNA1509_6526} {RNA1310_9218, RNA1509_6526} {RNA1509_6526, RNA815_5702} Mlig455_041582 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.0]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=186.1]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=504, Expect=6e-174]; ENSG00000198814, GK, glycerol kinase, [RH, Score=502, Expect=4e-173]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=487, Expect=2e-167]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=510, Expect=2e-176]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=490, Expect=5e-169]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=488, Expect=5e-168]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=519, Expect=2e-180]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=503, Expect=9e-175]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=462, Expect=1e-158]} {RNA1509_6526} {RNA1310_9218} {RNA815_5702} |
| 5. | MligTC455_47579 | 133 | 2.76 | Mlig455_041880 | Neo: - Age: Down-Up-Down |
0.978 | - | - | - | - | - | 0.978 | Mlig455_041880 {REF} {Length: 2196} {TRANSSPLICED} {RNA1509_11215, RNA1509_36784} {RNA1310_37626, RNA1509_11215} {RNA1509_11215, RNA815_15592} | |
| 6. | MligTC455_13744 | 124 | 2.59 | Mlig455_039419 | Neo: - Age: Down-Down-Up |
0.97 | - | - | - | - | - | 0.970 | Mlig455_039419 {REF} {Length: 1298} {RNA1509_53208} {RNA1310_28550} {RNA815_56261} | |
| 7. | MligTC455_45646 | 1265 | 26.36 | Mlig455_057121, Mlig455_069297 | Neo: - Age: - Region-enriched R4: 1.525/0.00499 |
PLEKHF2 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_057121 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229} {RNA1310_12913.1} {RNA815_8773} Mlig455_069297 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=71.7]; PH domain [PF00169.31, score=34.2]; PH domain [PF14593.8, score=21.3]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [RH, Score=221, Expect=8e-72]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [RH, Score=220, Expect=1e-71]} {Dmel: FBgn0025381, rush, rush hour, [RH, Score=209, Expect=1e-66]} {Celegans: WBGene00014019, ZK632.12, [RH, Score=206, Expect=4e-66]} {Smed: dd_Smed_v6_6176_1_1, dd_Smed_v6_6176_1_1, [RH, Score=189, Expect=2e-59]} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1310_12913.1, RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862} {RNA1509_20229, RNA1509_35179, RNA1509_35502, RNA1509_54131, RNA1509_56862, RNA815_8773} |
| 8. | MligTC455_49796 | 155 | 3.22 | Mlig455_008307 | Neo: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_008307 {REF} {Length: 1315} {RNA1509_54157} {RNA1310_15226.1} {RNA815_21558} | |
| 9. | MligTC455_43235 | 557 | 11.61 | Mlig455_006186, Mlig455_065226 | Neo: - Age: Down-Up-Up |
0.963 | - | - | - | - | - | 0.963 | Mlig455_006186 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487, RNA1509_36490} {RNA1310_42840, RNA1509_28487, RNA1509_36490} {RNA1509_28487, RNA1509_36490, RNA815_21578} Mlig455_065226 {REF} {Length: 813} {TRANSSPLICED} {RNA1509_28487} {RNA1310_42840} {RNA815_21578} |
|
| 10. | MligTC455_31794 | 45 | 0.94 | Mlig455_012521 | Neo: - Age: Up-Down-Down |
0.96 | - | - | - | 0.960 | - | - | Mlig455_012521 {REF} {Length: 2281} {NoTransDecoderORF} {RNA1509_4933} {RNA1310_15558.1} {RNA815_3908} | |
| 11. | MligTC455_16707 | 165 | 3.45 | Mlig455_055705 | Neo: - |
COPS4 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_055705 {REF} {Length: 1420} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=50.4]; CSN4/RPN5/eIF3a helix turn helix domain [PF18420.3, score=27.5]} {Human: ENSG00000138663, COPS4, COP9 signalosome subunit 4, [RH, Score=268, Expect=7e-86]} {Mouse: ENSMUSG00000035297, Cops4, COP9 signalosome subunit 4, [RH, Score=268, Expect=3e-86]} {Dmel: FBgn0027054, CSN4, COP9 signalosome subunit 4, [RH, Score=267, Expect=7e-86]} {Celegans: WBGene00000816, csn-4, COP9 signalosome complex subunit 4, [RH, Score=201, Expect=4e-60]} {Smed: dd_Smed_v6_4122_0_6, dd_Smed_v6_4122_0_6, [RH, Score=171, Expect=4e-49]} {RNA1509_5936} {RNA1310_22699} {RNA815_10050} |
| 12. | MligTC455_49738 | 135 | 2.81 | Mlig455_038770 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_038770 {REF} {Length: 641} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27803} {RNA1310_53700, RNA1509_27803} {RNA1509_27803, RNA815_27923} | |
| 13. | MligTC455_49224 | 228 | 4.75 | Mlig455_020671, Mlig455_048768 | Neo: - Age: - |
VPS41 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_020671 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867} Mlig455_048768 {REF} {Length: 3692} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=4e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=302, Expect=5e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=389, Expect=2e-121]} {RNA1509_34132} {RNA1310_6719, RNA1509_34132} {RNA1509_34132, RNA815_4867} |
| 14. | MligTC455_21028 | 477 | 9.95 | Mlig455_040137 | Neo: - Age: logFC(26M/2M)=-0.333 |
NOTCH2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_040137 {REF} {Length: 3557} {Pfam: Calcium-binding EGF domain [PF07645.17, score=284.9]; EGF-like domain [PF00008.29, score=212.4]; Human growth factor-like EGF [PF12661.9, score=149.3]; EGF domain [PF12947.9, score=133.6]; Delta serrate ligand [PF01414.21, score=93.4]; EGF-like domain [PF07974.15, score=77.9]; Complement Clr-like EGF-like [PF12662.9, score=57.4]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=281, Expect=1e-78]; ENSG00000074181, NOTCH3, notch 3, [Score=280, Expect=2e-78]; ENSG00000235396, NOTCH4, notch 4, [Score=275, Expect=9e-77]; ENSG00000232339, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000206312, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000223355, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000204301, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000234876, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000148400, NOTCH1, notch 1, [Score=268, Expect=2e-74]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=272, Expect=7e-76]; ENSMUSG00000027878, Notch2, notch 2, [Score=271, Expect=1e-75]; ENSMUSG00000026923, Notch1, notch 1, [Score=270, Expect=5e-75]} {Dmel: FBgn0004647, N, Notch, [Score=286, Expect=1e-80]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=225, Expect=2e-60]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=223, Expect=3e-60]} {RNA1509_24587} {RNA1310_15735} {RNA815_2179.1} |