TomoSeq data search

Data search

Results for MligTC455_44343

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44343

2474

51.54

Mlig455_035067, Mlig455_035084

Neo: -

Age: -

RAB24

Mlig455_035067 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=136.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.8]; ADP-ribosylation factor family [PF00025.23, score=31.3]} {Human: ENSG00000169228, RAB24, RAB24, member RAS oncogene family, [Score=179, Expect=1e-56]} {Mouse: ENSMUSG00000034789, Rab24, RAB24, member RAS oncogene family, [Score=182, Expect=5e-58]} {Dmel: FBgn0014010, Rab5, [Score=121, Expect=5e-34]} {Celegans: WBGene00004268, rab-5, RAB family, [Score=130, Expect=8e-38]} {Smed: dd_Smed_v6_2486_0_1, dd_Smed_v6_2486_0_1, [Score=167, Expect=2e-52]} {RNA1509_8747} {RNA1310_26427.1} {RNA815_12554.1}

Mlig455_035084 {REF} {Length: 1209} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=135.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.8]; ADP-ribosylation factor family [PF00025.23, score=31.2]} {Human: ENSG00000169228, RAB24, RAB24, member RAS oncogene family, [Score=179, Expect=2e-56]} {Mouse: ENSMUSG00000034789, Rab24, RAB24, member RAS oncogene family, [Score=182, Expect=6e-58]} {Dmel: FBgn0014010, Rab5, [Score=120, Expect=1e-33]} {Celegans: WBGene00004268, rab-5, RAB family, [Score=129, Expect=3e-37]} {Smed: dd_Smed_v6_2486_0_1, dd_Smed_v6_2486_0_1, [Score=169, Expect=5e-53]} {RNA1509_8747} {RNA1310_26427.1, RNA1509_8747} {RNA1509_8747, RNA815_12554.1}

Cumulative graph for MligTC455_44343

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.008	5.819	0.98948	1.00000
RegionR2	-0.417	5.819	0.24145	0.61681
RegionR3	0.012	5.819	0.96822	1.00000
RegionR4	0.281	5.819	0.43638	0.76543
RegionR5	0.252	5.819	0.38316	0.73796
RegionR6	0.146	5.819	0.62772	1.00000
RegionR7	0.282	5.819	0.39566	1.00000
RegionR8	-0.548	5.819	0.20132	0.79917

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.79	5.819	0.35476	1.00000
RegenerationR2	0.026	5.819	0.94302	1.00000
RegenerationR3	-0.176	5.819	0.63801	0.92414
RegenerationR4	-0.165	5.819	0.67046	0.94265
RegenerationR5	-0.116	5.819	0.74731	0.97084
RegenerationR6	-0.262	5.819	0.48324	0.79384
RegenerationBL	-0.579	5.819	0.13167	0.43275
RegenerationTP	-0.61	5.819	0.14674	0.57026

Genes with expression patterns similar to MligTC455_44343

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44343	2474	51.54	Mlig455_035067, Mlig455_035084	Neo: - Age: -	RAB24	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035067 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=136.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.8]; ADP-ribosylation factor family [PF00025.23, score=31.3]} {Human: ENSG00000169228, RAB24, RAB24, member RAS oncogene family, [Score=179, Expect=1e-56]} {Mouse: ENSMUSG00000034789, Rab24, RAB24, member RAS oncogene family, [Score=182, Expect=5e-58]} {Dmel: FBgn0014010, Rab5, [Score=121, Expect=5e-34]} {Celegans: WBGene00004268, rab-5, RAB family, [Score=130, Expect=8e-38]} {Smed: dd_Smed_v6_2486_0_1, dd_Smed_v6_2486_0_1, [Score=167, Expect=2e-52]} {RNA1509_8747} {RNA1310_26427.1} {RNA815_12554.1} Mlig455_035084 {REF} {Length: 1209} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=135.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.8]; ADP-ribosylation factor family [PF00025.23, score=31.2]} {Human: ENSG00000169228, RAB24, RAB24, member RAS oncogene family, [Score=179, Expect=2e-56]} {Mouse: ENSMUSG00000034789, Rab24, RAB24, member RAS oncogene family, [Score=182, Expect=6e-58]} {Dmel: FBgn0014010, Rab5, [Score=120, Expect=1e-33]} {Celegans: WBGene00004268, rab-5, RAB family, [Score=129, Expect=3e-37]} {Smed: dd_Smed_v6_2486_0_1, dd_Smed_v6_2486_0_1, [Score=169, Expect=5e-53]} {RNA1509_8747} {RNA1310_26427.1, RNA1509_8747} {RNA1509_8747, RNA815_12554.1}
2.	MligTC455_38205	600	12.5	Mlig455_057698	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.274		1.657	-	0.703	-	0.954	-	-	Mlig455_057698 {REF} {Length: 1671} {Pfam: Protein of unknown function with motif GDWWSH [PF15667.7, score=76.0]} {Smed: dd_Smed_v6_6622_0_1, dd_Smed_v6_6622_0_1, [RH, Score=116, Expect=1e-30]} {RNA1509_16386} {RNA1310_17948.1} {RNA815_6839.1}
3.	MligTC455_24169	2159	44.97	Mlig455_025964	Neo: - Age: Down-Up-Up Region-enriched R5: 1.007/0.01417	PDCD6	0.973	-	-	-	0.973	-	-	Mlig455_025964 {REF} {Length: 1033} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=73.5]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF00036.34, score=67.4]; EF-hand domain pair [PF13833.8, score=55.2]; EF hand [PF13202.8, score=45.6]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=218, Expect=6e-72]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=216, Expect=3e-71]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=225, Expect=3e-75]} {Celegans: WBGene00019770, M04F3.4, [Score=193, Expect=6e-63]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=228, Expect=1e-76]} {RNA1509_19462, RNA1509_51684, RNA1509_8622} {RNA1310_33615, RNA1509_19462, RNA1509_51684, RNA1509_8622} {RNA1509_19462, RNA1509_51684, RNA1509_8622, RNA815_17202}
4.	MligTC455_24168	2155	44.89	Mlig455_025874	Neo: - Age: Up-Down-Up Region-enriched R5: 1.003/0.01412	PDCD6	0.972	-	-	-	0.972	-	-	Mlig455_025874 {REF} {Length: 843} {Pfam: EF hand [PF00036.34, score=48.9]; EF-hand domain pair [PF13499.8, score=48.3]; EF-hand domain [PF13405.8, score=45.0]; EF-hand domain pair [PF13833.8, score=40.8]; EF hand [PF13202.8, score=27.4]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=153, Expect=3e-48]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [Score=154, Expect=1e-47]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=154, Expect=2e-48]} {Celegans: WBGene00019770, M04F3.4, [Score=135, Expect=4e-41]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=163, Expect=4e-52]} {RNA1509_19462} {RNA1310_34663.1} {RNA815_17202}
5.	MligTC455_32957	1141	23.76	Mlig455_070605	Neo: - Age: -	PNPLA6	0.951	-	-	-	0.951	-	-	Mlig455_070605 {REF} {Length: 2477} {Pfam: Patatin-like phospholipase [PF01734.24, score=81.3]} {Human: ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [Score=425, Expect=6e-135]; ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [Score=404, Expect=4e-127]} {Mouse: ENSMUSG00000004565, Pnpla6, patatin-like phospholipase domain containing 6, [Score=421, Expect=9e-134]; ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [Score=405, Expect=1e-127]} {Dmel: FBgn0003656, sws, swiss cheese, [Score=393, Expect=8e-123]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [Score=338, Expect=2e-103]} {Smed: dd_Smed_v6_11184_0_2, dd_Smed_v6_11184_0_2, [Score=439, Expect=3e-140]} {RNA1509_9455} {RNA1310_948.1} {RNA815_235.1}
6.	MligTC455_32956	1141	23.76	Mlig455_051391	Neo: - Age: -	PNPLA7	0.95	-	-	-	0.950	-	-	Mlig455_051391 {REF} {Length: 5298} {TRANSSPLICED} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=139.3]; Patatin-like phospholipase [PF01734.24, score=78.2]} {Human: ENSG00000130653, PNPLA7, patatin like phospholipase domain containing 7, [RH, Score=926, Expect=0.0]; ENSG00000032444, PNPLA6, patatin like phospholipase domain containing 6, [RH, Score=894, Expect=0.0]} {Mouse: ENSMUSG00000036833, Pnpla7, patatin-like phospholipase domain containing 7, [RH, Score=911, Expect=0.0]} {Dmel: FBgn0003656, sws, swiss cheese, [RH, Score=823, Expect=0.0]} {Celegans: WBGene00022718, ZK370.4, Uncharacterized NTE family protein ZK370.4, [RH, Score=591, Expect=0.0]} {Smed: dd_Smed_v6_11184_0_1, dd_Smed_v6_11184_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1310_948.1, RNA1509_28533, RNA1509_4301, RNA1509_9455} {RNA1509_28533, RNA1509_4301, RNA1509_9455, RNA815_235.1}

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