Data search
Results for MligTC455_44375
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44375 | 609 | 12.69 | Mlig455_003067, Mlig455_062826 | Neo: - Age: Down-Up-Down |
POLB | Mlig455_003067 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=78.9]; Fingers domain of DNA polymerase lambda [PF10391.11, score=66.6]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.7]; Pathogenicity locus [PF11731.10, score=24.9]; Helix-hairpin-helix motif [PF00633.25, score=20.9]; Helix-hairpin-helix motif [PF12836.9, score=20.3]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=375, Expect=2e-129]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=376, Expect=3e-130]} {RNA1509_35682} {RNA1310_17429.2} {RNA815_9300} Mlig455_062826 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=79.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=67.8]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.0]; Pathogenicity locus [PF11731.10, score=25.2]; Helix-hairpin-helix motif [PF00633.25, score=20.8]; Helix-hairpin-helix motif [PF12836.9, score=20.6]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=377, Expect=2e-130]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=378, Expect=5e-131]} {RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1310_17429.2, RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1509_13227, RNA1509_35682, RNA1509_55446, RNA815_9300} |
Cumulative graph for MligTC455_44375
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.917 | 4.027 | 0.04427 | 0.50707 | |
| RegionR2 | 1.094 | 4.027 | 0.18926 | 0.54431 | |
| RegionR3 | 0.613 | 4.027 | 0.46958 | 0.97533 | |
| RegionR4 | 1.271 | 4.027 | 0.10250 | 0.31244 | |
| RegionR5 | 0.618 | 4.027 | 0.45754 | 0.81980 | |
| RegionR6 | 1.07 | 4.027 | 0.14534 | 0.68119 | |
| RegionR7 | 1.583 | 4.027 | 0.02813 | 0.31760 | |
| RegionR8 | 0.668 | 4.027 | 0.51084 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.24 | 4.027 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.142 | 4.027 | 0.73655 | 0.96872 | |
| RegenerationR3 | 0.133 | 4.027 | 0.78884 | 0.97865 | |
| RegenerationR4 | -0.751 | 4.027 | 0.13611 | 0.55611 | |
| RegenerationR5 | -0.283 | 4.027 | 0.53386 | 0.87632 | |
| RegenerationR6 | -0.662 | 4.027 | 0.17549 | 0.50835 | |
| RegenerationBL | 0.29 | 4.027 | 0.58263 | 0.93439 | |
| RegenerationTP | 0.057 | 4.027 | 0.92106 | 1.00000 |
Genes with expression patterns similar to MligTC455_44375
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44375 | 609 | 12.69 | Mlig455_003067, Mlig455_062826 | Neo: - Age: Down-Up-Down |
POLB | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003067 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=78.9]; Fingers domain of DNA polymerase lambda [PF10391.11, score=66.6]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.7]; Pathogenicity locus [PF11731.10, score=24.9]; Helix-hairpin-helix motif [PF00633.25, score=20.9]; Helix-hairpin-helix motif [PF12836.9, score=20.3]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=375, Expect=2e-129]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=376, Expect=3e-130]} {RNA1509_35682} {RNA1310_17429.2} {RNA815_9300} Mlig455_062826 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=79.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=67.8]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.0]; Pathogenicity locus [PF11731.10, score=25.2]; Helix-hairpin-helix motif [PF00633.25, score=20.8]; Helix-hairpin-helix motif [PF12836.9, score=20.6]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=377, Expect=2e-130]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=378, Expect=5e-131]} {RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1310_17429.2, RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1509_13227, RNA1509_35682, RNA1509_55446, RNA815_9300} |
| 2. | MligTC455_44099 | 555 | 11.56 | Mlig455_036462 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_036462 {REF} {Length: 2657} {Pfam: TMEM154 protein family [PF15102.8, score=22.8]; Semaphorin 4F C-terminal [PF19428.1, score=19.0]} {RNA1509_9166} {RNA1310_17457, RNA1509_9166} {RNA1509_9166, RNA815_8775} | |
| 3. | MligTC455_52540 | 588 | 12.24 | Mlig455_066987 | Neo: - Age: - |
TULP4 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_066987 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=242, Expect=8e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=248, Expect=8e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=114, Expect=8e-26]} {RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1310_4370.1, RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1509_50986, RNA1509_52335, RNA1509_9068, RNA815_13995} |