Data search
Results for MligTC455_52540
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52540 | 588 | 12.24 | Mlig455_066987 | Neo: - Age: - |
TULP4 | Mlig455_066987 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=242, Expect=8e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=248, Expect=8e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=114, Expect=8e-26]} {RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1310_4370.1, RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1509_50986, RNA1509_52335, RNA1509_9068, RNA815_13995} |
Cumulative graph for MligTC455_52540
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.914 | 3.87 | 0.31215 | 0.96149 | |
| RegionR2 | -1.031 | 3.87 | 0.01405 | 0.12450 | |
| RegionR3 | -0.574 | 3.87 | 0.09867 | 0.55087 | |
| RegionR4 | 0.915 | 3.87 | 0.02298 | 0.11245 | |
| RegionR5 | 0.566 | 3.87 | 0.05885 | 0.21039 | |
| RegionR6 | -0.042 | 3.87 | 0.90303 | 1.00000 | |
| RegionR7 | -0.798 | 3.87 | 0.11630 | 0.64479 | |
| RegionR8 | 0.05 | 3.87 | 0.92885 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.001 | 3.87 | 0.01930 | 0.55474 | |
| RegenerationR2 | 0.203 | 3.87 | 0.56544 | 0.90103 | |
| RegenerationR3 | -0.378 | 3.87 | 0.34620 | 0.76904 | |
| RegenerationR4 | -0.704 | 3.87 | 0.07050 | 0.42225 | |
| RegenerationR5 | -0.559 | 3.87 | 0.10451 | 0.49017 | |
| RegenerationR6 | -0.156 | 3.87 | 0.69029 | 0.91909 | |
| RegenerationBL | -0.401 | 3.87 | 0.43728 | 0.80507 | |
| RegenerationTP | -0.293 | 3.87 | 0.59572 | 0.95825 |
Genes with expression patterns similar to MligTC455_52540
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52540 | 588 | 12.24 | Mlig455_066987 | Neo: - Age: - |
TULP4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066987 {REF} {Length: 4354} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=88.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.9]} {Human: ENSG00000130338, TULP4, tubby like protein 4, [RH, Score=243, Expect=5e-66]} {Mouse: ENSMUSG00000034377, Tulp4, tubby like protein 4, [RH, Score=242, Expect=8e-66]} {Dmel: FBgn0039530, Tusp, [RH, Score=248, Expect=8e-68]} {Celegans: WBGene00022139, tub-2, TUBby-related, [RH, Score=98.6, Expect=4e-22]} {Smed: dd_Smed_v6_18217_0_1, dd_Smed_v6_18217_0_1, [RH, Score=114, Expect=8e-26]} {RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1310_4370.1, RNA1509_50986, RNA1509_52335, RNA1509_9068} {RNA1509_50986, RNA1509_52335, RNA1509_9068, RNA815_13995} |
| 2. | MligTC455_45346 | 480 | 9.99 | Mlig455_003810, Mlig455_033273 | Neo: - Age: logFC(26M/2M)=-0.601 |
1.765 | - | - | - | - | 0.783 | 0.982 | Mlig455_003810 {REF} {Length: 2643} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=38.7]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584} Mlig455_033273 {REF} {Length: 1124} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=37.8]} {RNA1509_46482} {RNA1310_40763} {RNA815_12584} |
|
| 3. | MligTC455_23776 | 1268 | 26.41 | Mlig455_022422 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_022422 {REF} {Length: 1936} {RNA1509_49905} {RNA1310_51655} {RNA815_1417.1} | |
| 4. | MligTC455_44375 | 609 | 12.69 | Mlig455_003067, Mlig455_062826 | Neo: - Age: Down-Up-Down |
POLB | 0.958 | - | - | - | - | 0.958 | - | Mlig455_003067 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=78.9]; Fingers domain of DNA polymerase lambda [PF10391.11, score=66.6]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.7]; Pathogenicity locus [PF11731.10, score=24.9]; Helix-hairpin-helix motif [PF00633.25, score=20.9]; Helix-hairpin-helix motif [PF12836.9, score=20.3]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=375, Expect=2e-129]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=376, Expect=3e-130]} {RNA1509_35682} {RNA1310_17429.2} {RNA815_9300} Mlig455_062826 {REF} {Length: 1649} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=110.3]; Helix-hairpin-helix domain [PF14716.8, score=79.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=67.8]; DNA polymerase beta thumb [PF14791.8, score=59.2]; Helix-hairpin-helix domain [PF14520.8, score=39.0]; Pathogenicity locus [PF11731.10, score=25.2]; Helix-hairpin-helix motif [PF00633.25, score=20.8]; Helix-hairpin-helix motif [PF12836.9, score=20.6]} {Human: ENSG00000070501, POLB, DNA polymerase beta, [RH, Score=377, Expect=2e-130]} {Mouse: ENSMUSG00000031536, Polb, polymerase (DNA directed), beta, [RH, Score=378, Expect=5e-131]} {RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1310_17429.2, RNA1509_13227, RNA1509_35682, RNA1509_55446} {RNA1509_13227, RNA1509_35682, RNA1509_55446, RNA815_9300} |
| 5. | MligTC455_16751 | 484 | 10.09 | Mlig455_013502 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.144/0.00764 |
ZNF106 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_013502 {REF} {Length: 4249} {Human: ENSG00000103994, ZNF106, zinc finger protein 106, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000027288, Zfp106, zinc finger protein 106, [Score=113, Expect=9e-25]} {RNA1509_50964, RNA1509_8753} {RNA1310_2573.2, RNA1509_50964, RNA1509_8753} {RNA1509_50964, RNA1509_8753, RNA815_9474} |
| 6. | MligTC455_22985 | 342 | 7.13 | Mlig455_057165 | Neo: Irradiation |
0.951 | - | - | - | - | - | 0.951 | Mlig455_057165 {REF} {Length: 2740} {NoTransDecoderORF} {RNA1509_27555, RNA1509_53123} {RNA1310_41935.1, RNA1509_27555, RNA1509_53123} {RNA1509_27555, RNA1509_53123, RNA815_30388} | |
| 7. | MligTC455_33030 | 1399 | 29.14 | Mlig455_068103 | Neo: - Age: logFC(26M/2M)=-0.209 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_068103 {REF} {Length: 4508} {RNA1509_19594, RNA1509_40038} {RNA1310_6816.1, RNA1509_19594} {RNA1509_19594, RNA815_2112.1} |
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