Data search
Results for MligTC455_44382
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44382 | 1370 | 28.54 | Mlig455_012334 | Neo: - Age: Down-Up-Up |
EIF2D | Mlig455_012334 {REF} {Length: 1896} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=47.5]} {Human: ENSG00000143486, EIF2D, eukaryotic translation initiation factor 2D, [Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026427, Eif2d, eukaryotic translation initiation factor 2D, [Score=106, Expect=1e-25]} {Celegans: WBGene00016113, eif-2D, Eukaryotic Initiation Factor, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_8416_0_1, dd_Smed_v6_8416_0_1, [Score=76.6, Expect=1e-15]} {RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1310_15383.1, RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1509_11904, RNA1509_21305, RNA1509_42762, RNA815_5804} |
Cumulative graph for MligTC455_44382
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.577 | 5.057 | 0.39891 | 1.00000 | |
| RegionR2 | -0.228 | 5.057 | 0.56960 | 0.93029 | |
| RegionR3 | -0.432 | 5.057 | 0.19977 | 0.73930 | |
| RegionR4 | 0.071 | 5.057 | 0.83803 | 1.00000 | |
| RegionR5 | 0.78 | 5.057 | 0.00562 | 0.03786 | |
| RegionR6 | -0.088 | 5.057 | 0.79152 | 1.00000 | |
| RegionR7 | 0.033 | 5.057 | 0.93514 | 1.00000 | |
| RegionR8 | -0.713 | 5.057 | 0.21764 | 0.82379 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.844 | 5.057 | 0.36497 | 1.00000 | |
| RegenerationR2 | 0.18 | 5.057 | 0.62475 | 0.92479 | |
| RegenerationR3 | 0.661 | 5.057 | 0.09214 | 0.48928 | |
| RegenerationR4 | 0.144 | 5.057 | 0.70267 | 0.95483 | |
| RegenerationR5 | -0.295 | 5.057 | 0.40048 | 0.79961 | |
| RegenerationR6 | 0.373 | 5.057 | 0.33421 | 0.68042 | |
| RegenerationBL | -0.128 | 5.057 | 0.78416 | 1.00000 | |
| RegenerationTP | 0.231 | 5.057 | 0.64134 | 0.98395 |
Genes with expression patterns similar to MligTC455_44382
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44382 | 1370 | 28.54 | Mlig455_012334 | Neo: - Age: Down-Up-Up |
EIF2D | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012334 {REF} {Length: 1896} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=47.5]} {Human: ENSG00000143486, EIF2D, eukaryotic translation initiation factor 2D, [Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026427, Eif2d, eukaryotic translation initiation factor 2D, [Score=106, Expect=1e-25]} {Celegans: WBGene00016113, eif-2D, Eukaryotic Initiation Factor, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_8416_0_1, dd_Smed_v6_8416_0_1, [Score=76.6, Expect=1e-15]} {RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1310_15383.1, RNA1509_11904, RNA1509_21305, RNA1509_42762} {RNA1509_11904, RNA1509_21305, RNA1509_42762, RNA815_5804} |
| 2. | MligTC455_24707 | 827 | 17.23 | Mlig455_017148 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.517/0.00285 |
2.448 | - | - | 0.782 | - | 0.960 | 0.706 | Mlig455_017148 {REF} {Length: 2506} {TRANSSPLICED} {RNA1509_10665, RNA1509_46789} {RNA1310_219, RNA1509_10665, RNA1509_46789} {RNA1509_10665, RNA1509_46789, RNA815_1960} | |
| 3. | MligTC455_24708 | 855 | 17.81 | Mlig455_019686 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.526/0.00312 |
1.755 | - | - | 0.796 | - | 0.959 | - | Mlig455_019686 {REF} {Length: 4383} {TRANSSPLICED} {RNA1509_10665, RNA1509_52462} {RNA1310_219, RNA1509_52462} {RNA1509_52462, RNA815_1960} | |
| 4. | MligTC455_14649 | 2083 | 43.4 | Mlig455_031604 | Neo: - Age: - |
CLPB | 1.701 | - | 0.750 | - | 0.951 | - | - | Mlig455_031604 {REF} {Length: 2135} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=137.2]; Ankyrin repeat [PF00023.32, score=50.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=48.1]; Ankyrin repeats (3 copies) [PF12796.9, score=44.3]; Ankyrin repeat [PF13606.8, score=40.0]; Ankyrin repeats (many copies) [PF13637.8, score=34.4]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=31.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.7]; Ankyrin repeats (many copies) [PF13857.8, score=29.7]; AAA domain [PF13401.8, score=26.3]; AAA ATPase domain [PF13191.8, score=22.9]; Sigma-54 interaction domain [PF00158.28, score=20.6]} {Human: ENSG00000162129, CLPB, ClpB homolog, mitochondrial AAA ATPase chaperonin, [RH, Score=522, Expect=9e-178]} {Mouse: ENSMUSG00000001829, Clpb, ClpB caseinolytic peptidase B, [RH, Score=526, Expect=2e-179]} {Dmel: FBgn0039075, CG4393, [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_7341_0_1, dd_Smed_v6_7341_0_1, [RH, Score=511, Expect=5e-175]} {RNA1509_39293, RNA1509_49644, RNA1509_52161} {RNA1310_12205.1, RNA1509_39293, RNA1509_52161} {RNA1509_39293, RNA1509_52161, RNA815_4340} |
| 5. | MligTC455_23121 | 4355 | 90.73 | Mlig455_004752 | Neo: Int S/G2/M Age: - |
RPL24 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_004752 {REF} {Length: 661} {TRANSSPLICED} {Pfam: Ribosomal protein L24e [PF01246.22, score=100.3]} {Human: ENSG00000114391, RPL24, ribosomal protein L24, [RH, Score=174, Expect=3e-56]} {Mouse: ENSMUSG00000098274, Rpl24, ribosomal protein L24, [RH, Score=174, Expect=2e-56]} {Dmel: FBgn0032518, RpL24, Ribosomal protein L24, [RH, Score=172, Expect=1e-55]} {Celegans: WBGene00004436, rpl-24.1, 60S ribosomal protein L24, [RH, Score=128, Expect=2e-38]} {Smed: dd_Smed_v6_172_0_1, dd_Smed_v6_172_0_1, [RH, Score=145, Expect=3e-45]} {RNA1509_21369} {RNA1310_52946.1} {RNA815_28188} |
| 6. | MligTC455_24911 | 650 | 13.55 | Mlig455_019313 | Neo: - Age: Up-Down-Up |
ELP1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_019313 {REF} {Length: 5338} {TRANSSPLICED} {Pfam: IKI3 family [PF04762.14, score=397.1]} {Human: ENSG00000070061, ELP1, elongator complex protein 1, [Score=259, Expect=1e-71]} {Mouse: ENSMUSG00000028431, Elp1, elongator complex protein 1, [Score=193, Expect=3e-50]} {Dmel: FBgn0037926, Elp1, Elongator complex protein 1, [Score=154, Expect=4e-38]} {Celegans: WBGene00022463, elpc-1, Elongator complex protein 1, [Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_10377_0_1, dd_Smed_v6_10377_0_1, [Score=130, Expect=7e-31]} {RNA1509_11425} {RNA1310_1576.2} {RNA815_614} |
| 7. | MligTC455_48794 | 1112 | 23.17 | Mlig455_020800 | Neo: - Age: Down-Up-Down |
SSU72 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_020800 {REF} {Length: 925} {TRANSSPLICED} {Pfam: Ssu72-like protein [PF04722.15, score=280.2]} {Human: ENSG00000160075, SSU72, SSU72 homolog, RNA polymerase II CTD phosphatase, [RH, Score=276, Expect=2e-95]} {Mouse: ENSMUSG00000029038, Ssu72, Ssu72 RNA polymerase II CTD phosphatase homolog (yeast), [RH, Score=275, Expect=7e-95]} {Dmel: FBgn0031054, Ssu72, Ssu72 CTD phosphatase, [RH, Score=251, Expect=7e-86]} {Celegans: WBGene00020480, ssup-72, SSU (Yeast Suppressor of SUa7) Protein homolog, [RH, Score=228, Expect=8e-77]} {Smed: dd_Smed_v6_3141_0_1, dd_Smed_v6_3141_0_1, [RH, Score=255, Expect=1e-87]} {RNA1509_41948, RNA1509_5466} {RNA1310_34217, RNA1509_41948} {RNA1509_41948, RNA815_18154} |
| 8. | MligTC455_47000 | 7790 | 162.29 | Mlig455_016034 | Neo: Int S/G2/M Age: - |
RPL4 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_016034 {REF} {Length: 1287} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.2]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=79.7]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=441, Expect=9e-154]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=441, Expect=3e-154]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=424, Expect=5e-148]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=397, Expect=3e-138]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=394, Expect=1e-136]} {RNA1509_548, RNA1509_7612} {RNA1310_26790, RNA1509_548, RNA1509_7612} {RNA1509_548, RNA1509_7612, RNA815_10660} |
| 9. | MligTC455_47207 | 1909 | 39.76 | Mlig455_066877 | Neo: - Age: - Region-enriched R5: 1.278/0.00010 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_066877 {REF} {Length: 1225} {TRANSSPLICED} {RNA1509_24249, RNA1509_38093, RNA1509_56750} {RNA1310_21666.1, RNA1509_24249, RNA1509_38093} {RNA1509_24249, RNA1509_38093, RNA815_9948.1} |
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