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Results for MligTC455_44520

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44520 357 7.43 Mlig455_044338

Neo: -

Age: Up-Down-Down

 Mlig455_044338 {REF} {Length: 1631} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.1, Expect=3e-06]} {RNA1509_23374, RNA1509_39190} {RNA1310_47462, RNA1509_23374, RNA1509_39190} {RNA1509_23374, RNA1509_39190, RNA815_3404}

Cumulative graph for MligTC455_44520

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.865 3.357 0.56031 1.00000
RegionR2 0.817 3.357 0.14279 0.47046
RegionR3 0.052 3.357 0.90750 1.00000
RegionR4 0.769 3.357 0.13640 0.37574
RegionR5 0.17 3.357 0.67294 1.00000
RegionR6 -0.395 3.357 0.42959 0.99340
RegionR7 -0.178 3.357 0.78700 1.00000
RegionR8 -0.37 3.357 0.65509 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.819 3.357 0.69792 1.00000
RegenerationR2 -0.465 3.357 0.27172 0.71735
RegenerationR3 0.188 3.357 0.70148 0.94798
RegenerationR4 -1.037 3.357 0.04011 0.32275
RegenerationR5 0.047 3.357 0.91338 1.00000
RegenerationR6 1.442 3.357 0.00398 0.07533
RegenerationBL 0.676 3.357 0.31160 0.67717
RegenerationTP 0.533 3.357 0.46341 0.87653


Genes with expression patterns similar to MligTC455_44520

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44520 357 7.43 Mlig455_044338

Neo: -

Age: Up-Down-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_044338 {REF} {Length: 1631} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.1, Expect=3e-06]} {RNA1509_23374, RNA1509_39190} {RNA1310_47462, RNA1509_23374, RNA1509_39190} {RNA1509_23374, RNA1509_39190, RNA815_3404}
2. MligTC455_24956 800 16.67 Mlig455_011665

Neo: -

Age: Up-Down-Up

Region-enriched R8: 2.311/0.04035
Region-enriched R7: 2.063/0.03140
Region-enriched R6: 1.977/0.01275

Regeneration-downregulated BL: -1.784

Regeneration-depleted BL: -1.784

 0.97 - - - 0.970 - - Mlig455_011665 {REF} {Length: 1408} {RNA1310_24708.1} {RNA815_12886}
3. MligTC455_21509 178 3.71 Mlig455_020862, Mlig455_020986

Neo: -

Age: Up-Up-Down

 0.967 - - - 0.967 - -

Mlig455_020862 {REF} {Length: 1411} {NoTransDecoderORF} {RNA1509_23985} {RNA1310_2424} {RNA815_39326}

Mlig455_020986 {REF} {Length: 2736} {NoTransDecoderORF} {RNA1509_23985} {RNA1310_2424} {RNA815_39326}
4. MligTC455_21045 406 8.47 Mlig455_015801, Mlig455_045768

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.270

 LIN54 0.965 - - - - - 0.965

Mlig455_015801 {REF} {Length: 3088} {TRANSSPLICED} {Pfam: Tesmin/TSO1-like CXC domain, cysteine-rich domain [PF03638.17, score=79.9]; CXC domain of E3 ubiquitin-protein ligase MSL2 [PF16682.7, score=20.6]} {Human: ENSG00000189308, LIN54, lin-54 DREAM MuvB core complex component, [RH, Score=198, Expect=2e-53]} {Mouse: ENSMUSG00000035310, Lin54, lin-54 homolog (C. elegans), [RH, Score=197, Expect=5e-53]} {Dmel: FBgn0033846, mip120, Myb-interacting protein 120, [RH, Score=191, Expect=2e-50]} {Celegans: WBGene00003037, lin-54, [RH, Score=175, Expect=1e-47]} {Smed: dd_Smed_v6_4263_0_1, dd_Smed_v6_4263_0_1, [RH, Score=234, Expect=2e-69]} {RNA1509_26521} {RNA1310_25345} {RNA815_9349.1}

Mlig455_045768 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Tesmin/TSO1-like CXC domain, cysteine-rich domain [PF03638.17, score=79.9]; CXC domain of E3 ubiquitin-protein ligase MSL2 [PF16682.7, score=20.6]} {Human: ENSG00000189308, LIN54, lin-54 DREAM MuvB core complex component, [RH, Score=199, Expect=1e-53]} {Mouse: ENSMUSG00000035310, Lin54, lin-54 homolog (C. elegans), [RH, Score=197, Expect=3e-53]} {Dmel: FBgn0033846, mip120, Myb-interacting protein 120, [RH, Score=190, Expect=3e-50]} {Celegans: WBGene00003037, lin-54, [RH, Score=172, Expect=1e-46]} {Smed: dd_Smed_v6_4263_0_1, dd_Smed_v6_4263_0_1, [RH, Score=235, Expect=1e-69]} {RNA1509_26521} {RNA1310_25345, RNA1509_26521} {RNA1509_26521, RNA815_9349.1}
5. MligTC455_41514 1231 25.64 Mlig455_022657, Mlig455_022666, Mlig455_022676

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R4: 1.815/0.00175
Region-enriched R5: 1.778/0.00010

 0.962 - - - 0.962 - -

Mlig455_022657 {REF} {Length: 874} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911} {RNA815_19732}

Mlig455_022666 {REF} {Length: 870} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911, RNA1509_11728} {RNA1509_11728, RNA815_19732}

Mlig455_022676 {REF} {Length: 874} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911} {RNA815_19732}
6. MligTC455_49013 277 5.78 Mlig455_006233

Neo: -

Age: Down-Up-Down

 UBL3 0.961 - - - - - 0.961 Mlig455_006233 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=87.5]; Ubiquitin family [PF00240.25, score=19.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=150, Expect=2e-47]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=149, Expect=3e-47]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [RH, Score=145, Expect=1e-42]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=7e-31]} {RNA1509_29746} {RNA1310_56429} {RNA815_28925}
7. MligTC455_16430 401 8.36 Mlig455_034784

Neo: -

Age: logFC(26M/2M)=-0.294

 0.958 - - - - - 0.958 Mlig455_034784 {REF} {Length: 2260} {Dmel: FBgn0033661, CG13185, [Score=62.8, Expect=6e-10]} {RNA1509_11490} {RNA1310_53140} {RNA815_7177}
8. MligTC455_29396 146 3.03 Mlig455_042661

Neo: -

Age: -

 ZDHHC5 0.957 - - - - - 0.957 Mlig455_042661 {REF} {Length: 4594} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.3]} {Human: ENSG00000156599, ZDHHC5, zinc finger DHHC-type containing 5, [RH, Score=260, Expect=1e-78]} {Mouse: ENSMUSG00000034075, Zdhhc5, zinc finger, DHHC domain containing 5, [RH, Score=260, Expect=6e-79]} {Dmel: FBgn0085478, CG34449, [RH, Score=241, Expect=6e-70]} {Celegans: WBGene00012718, dhhc-8, Palmitoyltransferase, [Score=201, Expect=3e-59]} {Smed: dd_Smed_v6_9159_0_1, dd_Smed_v6_9159_0_1, [Score=231, Expect=3e-69]} {RNA1509_5313} {RNA1310_1658.1} {RNA815_3536}
9. MligTC455_38102 357 7.44 Mlig455_044855

Neo: -

Age: -

 PABPC4 0.953 - - - 0.953 - - Mlig455_044855 {REF} {Length: 2615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.4]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=72.8, Expect=4e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=70.5, Expect=2e-13]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=70.1, Expect=2e-13]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=94.0, Expect=1e-22]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=94.0, Expect=1e-21]} {Celegans: WBGene00001368, exc-7, [Score=81.6, Expect=1e-17]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=4e-08]} {RNA1509_12117} {RNA1310_20351.1} {RNA815_17342}
10. MligTC455_53207 912 18.99 Mlig455_008631, Mlig455_030293

Neo: -

Age: -

 PRKAA2 0.952 - - - 0.952 - -

Mlig455_008631 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=254.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=147.7]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.8]; Kinase-like [PF14531.8, score=27.5]; RIO1 family [PF01163.24, score=22.0]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=569, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=569, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=543, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=544, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=607, Expect=0.0]} {RNA1509_26070} {RNA1310_12782.1} {RNA815_11226}

Mlig455_030293 {REF} {Length: 3953} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=254.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=147.7]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.8]; Kinase-like [PF14531.8, score=27.6]; RIO1 family [PF01163.24, score=22.0]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=571, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=544, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=606, Expect=0.0]} {RNA1509_26070} {RNA1310_12782.1} {RNA815_11226}
11. MligTC455_47235 232 4.84 Mlig455_011474

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.498

 UBASH3B 0.951 - - - - - 0.951 Mlig455_011474 {REF} {Length: 5904} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=51.3]} {Human: ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [RH, Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [RH, Score=169, Expect=5e-44]} {Dmel: FBgn0039137, CG13604, [RH, Score=120, Expect=5e-28]} {Celegans: WBGene00020321, T07F12.1, [RH, Score=116, Expect=1e-28]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [RH, Score=162, Expect=4e-42]} {RNA1509_10245, RNA1509_37049} {RNA1310_4087.1, RNA1509_10245, RNA1509_37049} {RNA1509_10245, RNA1509_37049, RNA815_2334.1}

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