Data search
Results for MligTC455_38102
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38102 | 357 | 7.44 | Mlig455_044855 | Neo: - Age: - |
PABPC4 | Mlig455_044855 {REF} {Length: 2615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.4]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=72.8, Expect=4e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=70.5, Expect=2e-13]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=70.1, Expect=2e-13]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=94.0, Expect=1e-22]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=94.0, Expect=1e-21]} {Celegans: WBGene00001368, exc-7, [Score=81.6, Expect=1e-17]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=4e-08]} {RNA1509_12117} {RNA1310_20351.1} {RNA815_17342} |
Cumulative graph for MligTC455_38102
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.17 | 3.245 | 0.89275 | 1.00000 | |
| RegionR2 | -0.125 | 3.245 | 0.84897 | 1.00000 | |
| RegionR3 | 0.092 | 3.245 | 0.85181 | 1.00000 | |
| RegionR4 | -0.353 | 3.245 | 0.53793 | 0.86088 | |
| RegionR5 | 0.745 | 3.245 | 0.08488 | 0.27268 | |
| RegionR6 | 0.045 | 3.245 | 0.92855 | 1.00000 | |
| RegionR7 | 0.096 | 3.245 | 0.88137 | 1.00000 | |
| RegionR8 | -0.67 | 3.245 | 0.44850 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.304 | 3.245 | 0.17099 | 0.91495 | |
| RegenerationR2 | 0.022 | 3.245 | 0.97257 | 1.00000 | |
| RegenerationR3 | 0.072 | 3.245 | 0.90603 | 1.00000 | |
| RegenerationR4 | -0.072 | 3.245 | 0.90230 | 1.00000 | |
| RegenerationR5 | -0.301 | 3.245 | 0.58115 | 0.90094 | |
| RegenerationR6 | -0.015 | 3.245 | 0.98050 | 1.00000 | |
| RegenerationBL | 0.888 | 3.245 | 0.18975 | 0.52313 | |
| RegenerationTP | 0.658 | 3.245 | 0.40137 | 0.82997 |
Genes with expression patterns similar to MligTC455_38102
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38102 | 357 | 7.44 | Mlig455_044855 | Neo: - Age: - |
PABPC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044855 {REF} {Length: 2615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.4]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=72.8, Expect=4e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=70.5, Expect=2e-13]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=70.1, Expect=2e-13]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=94.0, Expect=1e-22]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=94.0, Expect=1e-21]} {Celegans: WBGene00001368, exc-7, [Score=81.6, Expect=1e-17]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=4e-08]} {RNA1509_12117} {RNA1310_20351.1} {RNA815_17342} |
| 2. | MligTC455_38101 | 253 | 5.26 | Mlig455_022140 | Neo: - Age: Down-Up-Down |
PABPC4 | 2.619 | - | 0.951 | - | 0.813 | - | 0.855 | Mlig455_022140 {REF} {Length: 2639} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=73.0]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=75.1, Expect=7e-15]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=74.3, Expect=1e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=74.3, Expect=9e-15]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=95.1, Expect=4e-23]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00001368, exc-7, [Score=83.2, Expect=4e-18]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=5e-08]} {RNA1509_12117, RNA1509_58617} {RNA1310_20351.1, RNA1509_58617} {RNA1509_58617, RNA815_17342} |
| 3. | MligTC455_48822 | 452 | 9.42 | Mlig455_008826, Mlig455_008931 | Neo: Irradiation Age: - Region-enriched R5: 1.925/0.04975 Regeneration-enriched R6: 4.526 |
TNK2 | 1.852 | - | - | - | 0.952 | - | 0.900 | Mlig455_008826 {REF} {Length: 2869} {Pfam: UBA-like domain [PF14555.8, score=27.3]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=69.7, Expect=1e-12]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.1, Expect=8e-13]} {RNA1310_31670} {RNA815_33665} Mlig455_008931 {REF} {Length: 3044} {Pfam: UBA-like domain [PF14555.8, score=28.7]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=70.9, Expect=6e-13]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.9, Expect=4e-13]} {RNA1310_31670} {RNA815_33665} |
| 4. | MligTC455_40734 | 722 | 15.04 | Mlig455_038758 | Neo: - Age: - |
BAG6 | 1.793 | - | - | - | 0.966 | - | 0.827 | Mlig455_038758 {REF} {Length: 3599} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.4]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=33.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=31.1]; Protein of unknown function (DUF2722) [PF10846.10, score=27.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.8]} {Human: ENSG00000233348, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000204463, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000228760, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000227761, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000096155, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000234651, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]; ENSG00000229524, BAG6, BCL2 associated athanogene 6, [RH, Score=76.6, Expect=1e-13]} {Mouse: ENSMUSG00000024392, Bag6, BCL2-associated athanogene 6, [RH, Score=77.4, Expect=2e-16]} {Dmel: FBgn0035793, CG7546, [RH, Score=65.5, Expect=2e-10]} {Smed: dd_Smed_v6_1102_0_1, dd_Smed_v6_1102_0_1, [RH, Score=121, Expect=8e-28]} {RNA1509_17545, RNA1509_37191} {RNA1310_3107.1, RNA1509_37191} {RNA1509_37191, RNA815_4886} |
| 5. | MligTC455_44338 | 719 | 14.98 | Mlig455_041655 | Neo: Irradiation Age: - Region-enriched R5: 2.104/0.00000 |
TECTB | 1.775 | - | 0.957 | - | - | - | 0.818 | Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844} |
| 6. | MligTC455_42182 | 394 | 8.21 | Mlig455_056803, Mlig455_056841 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.803 Region-enriched R4: 2.099/0.01008 |
1.706 | - | - | 0.961 | - | 0.745 | - | Mlig455_056803 {REF} {Length: 977} {Pfam: Aminoacyl-tRNA editing domain [PF04073.17, score=57.3]} {Mouse: ENSMUSG00000032673, Prorsd1, prolyl-tRNA synthetase domain containing 1, [RH, Score=123, Expect=1e-35]} {RNA1509_29724} {RNA1310_52200} {RNA815_26517} Mlig455_056841 {REF} {Length: 683} {TRANSSPLICED} {Pfam: Aminoacyl-tRNA editing domain [PF04073.17, score=58.6]} {Mouse: ENSMUSG00000032673, Prorsd1, prolyl-tRNA synthetase domain containing 1, [RH, Score=124, Expect=7e-36]} {RNA1310_52200} {RNA815_26517} |
|
| 7. | MligTC455_38441 | 146 | 3.05 | Mlig455_009353 | Neo: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_009353 {REF} {Length: 1433} {TRANSSPLICED} {Pfam: Nuclear pore component [PF10168.11, score=24.1]} {RNA1509_31196, RNA1509_52776} {RNA1310_23813.2, RNA1509_31196} {RNA1509_31196, RNA815_33121} | |
| 8. | MligTC455_41790 | 350 | 7.3 | Mlig455_013734 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.281 Region-enriched R5: 1.651/0.00086 |
SDR16C5 | 0.954 | - | 0.954 | - | - | - | - | Mlig455_013734 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=144.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=96.3]; KR domain [PF08659.12, score=37.6]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=209, Expect=1e-65]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=213, Expect=4e-67]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=2e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=187, Expect=2e-57]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [RH, Score=219, Expect=2e-69]} {RNA1509_31599, RNA1509_38654, RNA1509_38684} {RNA1310_34497, RNA1509_38654, RNA1509_38684} {RNA1509_38654, RNA1509_38684, RNA815_11020.2} |
| 9. | MligTC455_43618 | 188 | 3.91 | Mlig455_011416 | Neo: - Age: - Region-enriched R5: 1.749/0.00887 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_011416 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Putative DNA-binding domain [PF04326.16, score=39.4]} {RNA1509_22438} {RNA1310_17975.1} {RNA815_7387.1} | |
| 10. | MligTC455_44520 | 357 | 7.43 | Mlig455_044338 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_044338 {REF} {Length: 1631} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.1, Expect=3e-06]} {RNA1509_23374, RNA1509_39190} {RNA1310_47462, RNA1509_23374, RNA1509_39190} {RNA1509_23374, RNA1509_39190, RNA815_3404} | |
| 11. | MligTC455_44796 | 322 | 6.71 | Mlig455_016168 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.366/0.01937 |
UBASH3A | 0.953 | - | - | - | - | - | 0.953 | Mlig455_016168 {REF} {Length: 2883} {Human: ENSG00000160185, UBASH3A, ubiquitin associated and SH3 domain containing A, [Score=97.1, Expect=3e-20]; ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [Score=95.5, Expect=1e-19]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [Score=97.8, Expect=7e-21]; ENSMUSG00000042345, Ubash3a, ubiquitin associated and SH3 domain containing, A, [Score=95.1, Expect=1e-19]} {Dmel: FBgn0039137, CG13604, [Score=108, Expect=3e-24]} {Celegans: WBGene00009962, F53B6.7, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [Score=118, Expect=2e-27]} {RNA1509_26013} {RNA1310_1022.2} {RNA815_2099} |
| 12. | MligTC455_21509 | 178 | 3.71 | Mlig455_020862, Mlig455_020986 | Neo: - Age: Up-Up-Down |
0.951 | - | - | - | 0.951 | - | - | Mlig455_020862 {REF} {Length: 1411} {NoTransDecoderORF} {RNA1509_23985} {RNA1310_2424} {RNA815_39326} Mlig455_020986 {REF} {Length: 2736} {NoTransDecoderORF} {RNA1509_23985} {RNA1310_2424} {RNA815_39326} |
|
| 13. | MligTC455_48645 | 296 | 6.17 | Mlig455_043480 | Neo: - Age: - |
FBXO28 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_043480 {REF} {Length: 2009} {TRANSSPLICED} {Pfam: F-box domain [PF00646.35, score=22.8]; F-box-like [PF12937.9, score=19.5]} {Human: ENSG00000143756, FBXO28, F-box protein 28, [RH, Score=188, Expect=8e-56]} {Mouse: ENSMUSG00000047539, Fbxo28, F-box protein 28, [RH, Score=187, Expect=1e-55]} {Dmel: FBgn0036005, pall, pallbearer, [RH, Score=155, Expect=3e-44]} {RNA1509_24080} {RNA1310_21937.1, RNA1509_24080} {RNA1509_24080, RNA815_18920} |
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