Data search


search
Exact
Search

Results for MligTC455_44694

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44694 887 18.48 Mlig455_063537

Neo: -

Age: logFC(26M/2M)=0.202

DUSP16 Mlig455_063537 {REF} {Length: 4335} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=130.6]; Rhodanese-like domain [PF00581.22, score=31.7]} {Human: ENSG00000280962, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000278165, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000111266, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000184545, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000273793, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]} {Mouse: ENSMUSG00000037887, Dusp8, dual specificity phosphatase 8, [RH, Score=253, Expect=3e-75]; ENSMUSG00000030203, Dusp16, dual specificity phosphatase 16, [RH, Score=243, Expect=2e-71]} {Dmel: FBgn0036844, Mkp3, Mitogen-activated protein kinase phosphatase 3, [Score=139, Expect=3e-35]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [RH, Score=216, Expect=9e-62]} {Smed: dd_Smed_v6_8066_0_1, dd_Smed_v6_8066_0_1, [RH, Score=160, Expect=4e-42]} {RNA1509_9452} {RNA1310_8077} {RNA815_13871}

Cumulative graph for MligTC455_44694

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.402 4.454 0.28429 0.93590
RegionR2 0.046 4.454 0.91932 1.00000
RegionR3 -0.389 4.454 0.35435 0.88967
RegionR4 0.735 4.454 0.10513 0.31822
RegionR5 0.264 4.454 0.46730 0.82950
RegionR6 0.107 4.454 0.78857 1.00000
RegionR7 -0.055 4.454 0.91785 1.00000
RegionR8 0.696 4.454 0.20867 0.80985

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.937 4.454 0.59224 1.00000
RegenerationR2 0.432 4.454 0.25114 0.69768
RegenerationR3 0.627 4.454 0.14919 0.57837
RegenerationR4 0.068 4.454 0.87429 1.00000
RegenerationR5 0.367 4.454 0.34653 0.76154
RegenerationR6 0.808 4.454 0.05352 0.28987
RegenerationBL 0.581 4.454 0.18739 0.51925
RegenerationTP 0.126 4.454 0.80542 1.00000


Genes with expression patterns similar to MligTC455_44694

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44694 887 18.48 Mlig455_063537

Neo: -

Age: logFC(26M/2M)=0.202

DUSP16 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_063537 {REF} {Length: 4335} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=130.6]; Rhodanese-like domain [PF00581.22, score=31.7]} {Human: ENSG00000280962, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000278165, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000111266, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000184545, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000273793, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]} {Mouse: ENSMUSG00000037887, Dusp8, dual specificity phosphatase 8, [RH, Score=253, Expect=3e-75]; ENSMUSG00000030203, Dusp16, dual specificity phosphatase 16, [RH, Score=243, Expect=2e-71]} {Dmel: FBgn0036844, Mkp3, Mitogen-activated protein kinase phosphatase 3, [Score=139, Expect=3e-35]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [RH, Score=216, Expect=9e-62]} {Smed: dd_Smed_v6_8066_0_1, dd_Smed_v6_8066_0_1, [RH, Score=160, Expect=4e-42]} {RNA1509_9452} {RNA1310_8077} {RNA815_13871}
2. MligTC455_53687 2392 49.83 Mlig455_021645, Mlig455_021650

Neo: -

Age: -

NKD2 1.762 - - - 0.783 - 0.979

Mlig455_021645 {REF} {Length: 2305} {TRANSSPLICED} {RNA1509_10882} {RNA1310_29832} {RNA815_12411}

Mlig455_021650 {REF} {Length: 2354} {TRANSSPLICED} {Human: ENSG00000276920, NKD2, naked cuticle homolog 2, [Score=57.4, Expect=3e-08]; ENSG00000145506, NKD2, naked cuticle homolog 2, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000021567, Nkd2, naked cuticle 2, [Score=56.6, Expect=3e-08]} {Smed: dd_Smed_v6_16409_0_1, dd_Smed_v6_16409_0_1, [RH, Score=56.6, Expect=1e-08]} {RNA1509_10882, RNA1509_45153, RNA1509_48713, RNA1509_54266} {RNA1310_25627, RNA1509_10882, RNA1509_45153, RNA1509_48713, RNA1509_54266} {RNA1509_10882, RNA1509_45153, RNA1509_48713, RNA1509_54266, RNA815_12411}
3. MligTC455_21882 719 14.99 Mlig455_059822

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_059822 {REF} {Length: 3954} {TRANSSPLICED} {RNA1509_24654, RNA1509_40158, RNA1509_59890} {RNA1310_19639, RNA1509_40158, RNA1509_59890} {RNA1509_40158, RNA1509_59890, RNA815_21316}
4. MligTC455_39546 1581 32.95 Mlig455_044795, Mlig455_055563

Neo: -

Age: Down-Up-Up

PDE6D 0.964 - - - - - 0.964

Mlig455_044795 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: GMP-PDE, delta subunit [PF05351.13, score=60.7]; Protein of unknown function (DUF2515) [PF10720.11, score=19.5]} {Human: ENSG00000156973, PDE6D, phosphodiesterase 6D, [RH, Score=137, Expect=5e-40]} {Mouse: ENSMUSG00000026239, Pde6d, phosphodiesterase 6D, cGMP-specific, rod, delta, [Score=140, Expect=2e-40]} {Dmel: FBgn0032059, PrBP, Prenyl-binding protein, [Score=105, Expect=4e-27]} {Celegans: WBGene00003966, pdl-1, Phosphodiesterase delta-like protein, [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_9168_0_9, dd_Smed_v6_9168_0_9, [Score=134, Expect=2e-38]} {RNA1509_4210, RNA1509_8099} {RNA1310_21694, RNA1509_8099} {RNA1509_8099, RNA815_8937}

Mlig455_055563 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: GMP-PDE, delta subunit [PF05351.13, score=151.3]} {Human: ENSG00000156973, PDE6D, phosphodiesterase 6D, [RH, Score=244, Expect=5e-84]} {Mouse: ENSMUSG00000026239, Pde6d, phosphodiesterase 6D, cGMP-specific, rod, delta, [RH, Score=244, Expect=2e-84]} {Dmel: FBgn0032059, PrBP, Prenyl-binding protein, [RH, Score=191, Expect=3e-63]} {Celegans: WBGene00003966, pdl-1, Phosphodiesterase delta-like protein, [RH, Score=220, Expect=9e-75]} {Smed: dd_Smed_v6_9168_0_4, dd_Smed_v6_9168_0_4, [RH, Score=232, Expect=5e-80]} {RNA1509_4210} {RNA1310_21694} {RNA815_8937}
5. MligTC455_49141 470 9.79 Mlig455_061889

Neo: Int S/G2/M

Age: -

ZFR 0.959 - - - 0.959 - - Mlig455_061889 {REF} {Length: 3370} {Pfam: DZF domain [PF07528.16, score=161.3]; Zinc-finger of C2H2 type [PF12874.9, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=54.5]; SF3a60/Prp9 C-terminal [PF11931.10, score=19.8]} {Human: ENSG00000056097, ZFR, zinc finger RNA binding protein, [RH, Score=467, Expect=5e-148]} {Mouse: ENSMUSG00000022201, Zfr, zinc finger RNA binding protein, [RH, Score=464, Expect=3e-147]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [RH, Score=313, Expect=9e-93]} {Celegans: WBGene00022388, Y95B8A.8, [RH, Score=327, Expect=8e-99]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [RH, Score=506, Expect=1e-165]} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1310_3537.1, RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224, RNA815_393.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA