TomoSeq data search

Data search

Results for MligTC455_49141

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49141

470

9.79

Mlig455_061889

Neo: Int S/G2/M

Age: -

ZFR

Mlig455_061889 {REF} {Length: 3370} {Pfam: DZF domain [PF07528.16, score=161.3]; Zinc-finger of C2H2 type [PF12874.9, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=54.5]; SF3a60/Prp9 C-terminal [PF11931.10, score=19.8]} {Human: ENSG00000056097, ZFR, zinc finger RNA binding protein, [RH, Score=467, Expect=5e-148]} {Mouse: ENSMUSG00000022201, Zfr, zinc finger RNA binding protein, [RH, Score=464, Expect=3e-147]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [RH, Score=313, Expect=9e-93]} {Celegans: WBGene00022388, Y95B8A.8, [RH, Score=327, Expect=8e-99]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [RH, Score=506, Expect=1e-165]} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1310_3537.1, RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224, RNA815_393.1}

Cumulative graph for MligTC455_49141

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.501	3.587	0.69627	1.00000
RegionR2	0.762	3.587	0.24368	0.62001
RegionR3	0.07	3.587	0.89274	1.00000
RegionR4	-0.134	3.587	0.81911	1.00000
RegionR5	0.564	3.587	0.20941	0.50507
RegionR6	0.348	3.587	0.49681	1.00000
RegionR7	-0.743	3.587	0.30004	0.93478
RegionR8	-0.366	3.587	0.65710	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.772	3.587	0.65000	1.00000
RegenerationR2	0.258	3.587	0.64503	0.93375
RegenerationR3	0.788	3.587	0.21552	0.65216
RegenerationR4	0.777	3.587	0.22578	0.67412
RegenerationR5	0.193	3.587	0.73114	0.96439
RegenerationR6	0.847	3.587	0.16552	0.49589
RegenerationBL	1.781	3.587	0.00499	0.06568
RegenerationTP	0.269	3.587	0.76328	1.00000

Genes with expression patterns similar to MligTC455_49141

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49141	470	9.79	Mlig455_061889	Neo: Int S/G2/M Age: -	ZFR	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061889 {REF} {Length: 3370} {Pfam: DZF domain [PF07528.16, score=161.3]; Zinc-finger of C2H2 type [PF12874.9, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=54.5]; SF3a60/Prp9 C-terminal [PF11931.10, score=19.8]} {Human: ENSG00000056097, ZFR, zinc finger RNA binding protein, [RH, Score=467, Expect=5e-148]} {Mouse: ENSMUSG00000022201, Zfr, zinc finger RNA binding protein, [RH, Score=464, Expect=3e-147]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [RH, Score=313, Expect=9e-93]} {Celegans: WBGene00022388, Y95B8A.8, [RH, Score=327, Expect=8e-99]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [RH, Score=506, Expect=1e-165]} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1310_3537.1, RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224} {RNA1509_14416, RNA1509_17260, RNA1509_17912, RNA1509_19314, RNA1509_39472, RNA1509_59224, RNA815_393.1}
2.	MligTC455_42934	8566	178.46	Mlig455_001363	Neo: - Age: -	ATP5MC2	1.721	-	-	-	-	0.976	0.745	Mlig455_001363 {REF} {Length: 818} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=42.6]} {Human: ENSG00000135390, ATP5MC2, ATP synthase membrane subunit c locus 2, [RH, Score=147, Expect=2e-46]; ENSG00000154518, ATP5MC3, ATP synthase membrane subunit c locus 3, [RH, Score=144, Expect=5e-45]; ENSG00000159199, ATP5MC1, ATP synthase membrane subunit c locus 1, [RH, Score=143, Expect=5e-45]} {Mouse: ENSMUSG00000062683, Atp5g2, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9), [RH, Score=147, Expect=2e-46]; ENSMUSG00000018770, Atp5g3, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9), [RH, Score=142, Expect=2e-44]} {Dmel: FBgn0039830, ATPsynC, ATP synthase, subunit C, [RH, Score=147, Expect=1e-46]} {Celegans: WBGene00022336, Y82E9BR.3, ATP synthase lipid-binding protein, mitochondrial, [RH, Score=148, Expect=2e-47]} {Smed: dd_Smed_v6_401_0_1, dd_Smed_v6_401_0_1, [RH, Score=118, Expect=8e-36]} {RNA1509_16642, RNA1509_45244, RNA1509_55835} {RNA1310_44199.1, RNA1509_16642, RNA1509_45244, RNA1509_55835} {RNA1509_16642, RNA1509_45244, RNA1509_55835, RNA815_20099}
3.	MligTC455_40827	572	11.91	Mlig455_044485	Neo: Irradiation Age: Up-Down-Down		1.659	-	0.953	0.706	-	-	-	Mlig455_044485 {REF} {Length: 2920} {RNA1509_20181, RNA1509_30928, RNA1509_59911} {RNA1310_18910, RNA1509_20181, RNA1509_30928, RNA1509_59911} {RNA1509_20181, RNA1509_30928, RNA1509_59911, RNA815_13640}
4.	MligTC455_44694	887	18.48	Mlig455_063537	Neo: - Age: logFC(26M/2M)=0.202	DUSP16	0.959	-	-	-	0.959	-	-	Mlig455_063537 {REF} {Length: 4335} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=130.6]; Rhodanese-like domain [PF00581.22, score=31.7]} {Human: ENSG00000280962, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000278165, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000111266, DUSP16, dual specificity phosphatase 16, [RH, Score=250, Expect=7e-74]; ENSG00000184545, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]; ENSG00000273793, DUSP8, dual specificity phosphatase 8, [RH, Score=250, Expect=4e-74]} {Mouse: ENSMUSG00000037887, Dusp8, dual specificity phosphatase 8, [RH, Score=253, Expect=3e-75]; ENSMUSG00000030203, Dusp16, dual specificity phosphatase 16, [RH, Score=243, Expect=2e-71]} {Dmel: FBgn0036844, Mkp3, Mitogen-activated protein kinase phosphatase 3, [Score=139, Expect=3e-35]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [RH, Score=216, Expect=9e-62]} {Smed: dd_Smed_v6_8066_0_1, dd_Smed_v6_8066_0_1, [RH, Score=160, Expect=4e-42]} {RNA1509_9452} {RNA1310_8077} {RNA815_13871}

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