TomoSeq data search

Data search

Results for MligTC455_44731

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44731

174

3.63

Mlig455_056277

Neo: -

Age: Up-Down-Down

PCGF3

Mlig455_056277 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=43.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=33.3]; Ring finger domain [PF13639.8, score=28.7]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc-RING finger domain [PF14634.8, score=24.4]; RING-H2 zinc finger domain [PF12678.9, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.7]} {Human: ENSG00000185619, PCGF3, polycomb group ring finger 3, [RH, Score=221, Expect=2e-71]} {Mouse: ENSMUSG00000033623, Pcgf3, polycomb group ring finger 3, [RH, Score=218, Expect=3e-70]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [RH, Score=204, Expect=1e-65]} {Celegans: WBGene00008684, mig-32, [RH, Score=156, Expect=6e-44]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [RH, Score=216, Expect=3e-70]} {RNA1509_40598} {RNA1310_24432.1} {RNA815_12099}

Cumulative graph for MligTC455_44731

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.115	2.524	0.43370	1.00000
RegionR2	0.255	2.524	0.75965	1.00000
RegionR3	0.076	2.524	0.82533	1.00000
RegionR4	1.164	2.524	0.26235	0.56546
RegionR5	1.176	2.524	0.11405	0.33396
RegionR6	0.457	2.524	0.62132	1.00000
RegionR7	-0.59	2.524	0.96623	1.00000
RegionR8	1.576	2.524	0.15309	0.70928

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.075	2.524	0.99995	1.00000
RegenerationR2	-0.886	2.524	0.17151	0.61064
RegenerationR3	0.123	2.524	0.86089	1.00000
RegenerationR4	-0.248	2.524	0.72392	0.96293
RegenerationR5	-0.033	2.524	0.95701	1.00000
RegenerationR6	0.262	2.524	0.69561	0.92216
RegenerationBL	1.735	2.524	0.01943	0.15042
RegenerationTP	0.134	2.524	0.88641	1.00000

Genes with expression patterns similar to MligTC455_44731

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44731	174	3.63	Mlig455_056277	Neo: - Age: Up-Down-Down	PCGF3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056277 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=43.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=33.3]; Ring finger domain [PF13639.8, score=28.7]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc-RING finger domain [PF14634.8, score=24.4]; RING-H2 zinc finger domain [PF12678.9, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.7]} {Human: ENSG00000185619, PCGF3, polycomb group ring finger 3, [RH, Score=221, Expect=2e-71]} {Mouse: ENSMUSG00000033623, Pcgf3, polycomb group ring finger 3, [RH, Score=218, Expect=3e-70]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [RH, Score=204, Expect=1e-65]} {Celegans: WBGene00008684, mig-32, [RH, Score=156, Expect=6e-44]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [RH, Score=216, Expect=3e-70]} {RNA1509_40598} {RNA1310_24432.1} {RNA815_12099}
2.	MligTC455_20968	103	2.14	Mlig455_027054	Neo: - Age: -	CDC42BPG	1.758	-	-	0.805	-	-	0.953	Mlig455_027054 {REF} {Length: 8447} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=176.2]; CNH domain [PF00780.24, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.1]; PH domain [PF00169.31, score=24.0]} {Human: ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]} {Dmel: FBgn0023081, gek, genghis khan, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [RH, Score=738, Expect=0.0]} {Smed: dd_Smed_v6_2586_0_1, dd_Smed_v6_2586_0_1, [RH, Score=392, Expect=6e-113]} {RNA1509_5323} {RNA1310_2421, RNA1509_5323} {RNA1509_5323, RNA815_2352}
3.	MligTC455_13966	218	4.55	Mlig455_037507	Neo: - Age: - Region-enriched R4: 3.757/0.00033 Region-enriched R5: 2.914/0.00159		1.718	-	-	0.765	-	-	0.953	Mlig455_037507 {REF} {Length: 3606} {Pfam: BTB/POZ domain [PF00651.33, score=33.0]} {RNA1509_27824, RNA1509_48276} {RNA1310_15382, RNA1509_27824, RNA1509_48276} {RNA1509_27824, RNA1509_48276, RNA815_8360}
4.	MligTC455_20137	351	7.31	Mlig455_063548	Neo: - Age: -	MBTPS2	1.717	-	-	-	0.748	0.969	-	Mlig455_063548 {REF} {Length: 3107} {TRANSSPLICED} {Pfam: Peptidase family M50 [PF02163.24, score=49.2]} {Human: ENSG00000012174, MBTPS2, membrane bound transcription factor peptidase, site 2, [RH, Score=247, Expect=1e-75]} {Mouse: ENSMUSG00000046873, Mbtps2, membrane-bound transcription factor peptidase, site 2, [RH, Score=254, Expect=9e-79]} {Dmel: FBgn0033656, S2P, site-2 protease, [RH, Score=153, Expect=5e-41]} {Celegans: WBGene00013225, Y56A3A.2, [RH, Score=171, Expect=7e-47]} {Smed: dd_Smed_v6_12727_0_1, dd_Smed_v6_12727_0_1, [RH, Score=268, Expect=1e-84]} {RNA1509_36146} {RNA1310_25751.2} {RNA815_18115}
5.	MligTC455_11965	97	2.02	Mlig455_014571, Mlig455_070256	Neo: - Age: - Region-enriched R5: 2.636/0.01196		0.97	-	-	-	-	0.970	-	Mlig455_014571 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_52350} {RNA1310_144049} {RNA815_61317} Mlig455_070256 {REF} {Length: 296} {NoTransDecoderORF} {RNA1310_61832} {RNA815_61317}
6.	MligTC455_24412	23	0.48	Mlig455_033029	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_033029 {REF} {Length: 3698} {TRANSSPLICED} {RNA1509_8239} {RNA1310_6886.1} {RNA815_16300.1}

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