Data search
Results for MligTC455_20968
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20968 | 103 | 2.14 | Mlig455_027054 | Neo: - Age: - |
CDC42BPG | Mlig455_027054 {REF} {Length: 8447} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=176.2]; CNH domain [PF00780.24, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.1]; PH domain [PF00169.31, score=24.0]} {Human: ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]} {Dmel: FBgn0023081, gek, genghis khan, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [RH, Score=738, Expect=0.0]} {Smed: dd_Smed_v6_2586_0_1, dd_Smed_v6_2586_0_1, [RH, Score=392, Expect=6e-113]} {RNA1509_5323} {RNA1310_2421, RNA1509_5323} {RNA1509_5323, RNA815_2352} |
Cumulative graph for MligTC455_20968
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.53 | 2.078 | 0.52620 | 1.00000 | |
| RegionR2 | 0.543 | 2.078 | 0.63738 | 0.97609 | |
| RegionR3 | 0.874 | 2.078 | 0.38761 | 0.91879 | |
| RegionR4 | 0.839 | 2.078 | 0.46643 | 0.79429 | |
| RegionR5 | 0.544 | 2.078 | 0.58004 | 0.93875 | |
| RegionR6 | -0.68 | 2.078 | 0.97509 | 1.00000 | |
| RegionR7 | 0.617 | 2.078 | 0.64460 | 1.00000 | |
| RegionR8 | 0.794 | 2.078 | 0.62366 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.882 | 2.078 | 0.53201 | 1.00000 | |
| RegenerationR2 | 0.999 | 2.078 | 0.09687 | 0.49451 | |
| RegenerationR3 | 0.38 | 2.078 | 0.61345 | 0.91420 | |
| RegenerationR4 | 0.708 | 2.078 | 0.38536 | 0.80464 | |
| RegenerationR5 | 0.912 | 2.078 | 0.15907 | 0.58185 | |
| RegenerationR6 | 2.291 | 2.078 | 0.00783 | 0.10838 | |
| RegenerationBL | 0.03 | 2.078 | 0.97882 | 1.00000 | |
| RegenerationTP | -0.65 | 2.078 | 0.63396 | 0.98017 |
Genes with expression patterns similar to MligTC455_20968
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20968 | 103 | 2.14 | Mlig455_027054 | Neo: - Age: - |
CDC42BPG | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027054 {REF} {Length: 8447} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=176.2]; CNH domain [PF00780.24, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.1]; PH domain [PF00169.31, score=24.0]} {Human: ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]} {Dmel: FBgn0023081, gek, genghis khan, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [RH, Score=738, Expect=0.0]} {Smed: dd_Smed_v6_2586_0_1, dd_Smed_v6_2586_0_1, [RH, Score=392, Expect=6e-113]} {RNA1509_5323} {RNA1310_2421, RNA1509_5323} {RNA1509_5323, RNA815_2352} |
| 2. | MligTC455_44731 | 174 | 3.63 | Mlig455_056277 | Neo: - Age: Up-Down-Down |
PCGF3 | 1.758 | - | - | 0.805 | - | - | 0.953 | Mlig455_056277 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=43.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=33.3]; Ring finger domain [PF13639.8, score=28.7]; RING-type zinc-finger [PF13445.8, score=25.2]; zinc-RING finger domain [PF14634.8, score=24.4]; RING-H2 zinc finger domain [PF12678.9, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.7]} {Human: ENSG00000185619, PCGF3, polycomb group ring finger 3, [RH, Score=221, Expect=2e-71]} {Mouse: ENSMUSG00000033623, Pcgf3, polycomb group ring finger 3, [RH, Score=218, Expect=3e-70]} {Dmel: FBgn0002283, l(3)73Ah, lethal (3) 73Ah, [RH, Score=204, Expect=1e-65]} {Celegans: WBGene00008684, mig-32, [RH, Score=156, Expect=6e-44]} {Smed: dd_Smed_v6_3477_0_1, dd_Smed_v6_3477_0_1, [RH, Score=216, Expect=3e-70]} {RNA1509_40598} {RNA1310_24432.1} {RNA815_12099} |
| 3. | MligTC455_47649 | 165 | 3.43 | Mlig455_001268, Mlig455_034622 | Neo: - Age: Up-Down-Down |
PARD3, PARD3B | 0.968 | - | - | 0.968 | - | - | - | Mlig455_001268 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=91.6]; PDZ domain [PF13180.8, score=46.7]; PDZ domain [PF17820.3, score=41.1]} {Human: ENSG00000148498, PARD3, par-3 family cell polarity regulator, [Score=163, Expect=2e-40]; ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=160, Expect=1e-39]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=163, Expect=1e-40]; ENSMUSG00000025812, Pard3, par-3 family cell polarity regulator, [Score=160, Expect=9e-40]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.4, Expect=9e-21]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=126, Expect=2e-29]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041} Mlig455_034622 {REF} {Length: 5575} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=127.2]; N-terminal of Par3 and HAL proteins [PF12053.10, score=74.2]; PDZ domain [PF17820.3, score=71.0]; PDZ domain [PF13180.8, score=56.5]} {Human: ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.0, Expect=2e-20]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=112, Expect=8e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=155, Expect=7e-38]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041} |
| 4. | MligTC455_27056 | 837 | 17.43 | Mlig455_010512, Mlig455_061867 | Neo: - Age: - |
MRTFB | 0.965 | - | - | - | 0.965 | - | - | Mlig455_010512 {REF} {Length: 4452} {TRANSSPLICED} {Pfam: SAP domain [PF02037.29, score=25.5]} {Human: ENSG00000186260, MRTFB, myocardin related transcription factor B, [Score=72.0, Expect=7e-13]} {Mouse: ENSMUSG00000009569, Mkl2, MKL/myocardin-like 2, [Score=80.5, Expect=4e-15]} {Dmel: FBgn0052296, Mrtf, Myocardin-related transcription factor, [Score=58.9, Expect=1e-08]} {Smed: dd_Smed_v6_8558_0_1, dd_Smed_v6_8558_0_1, [Score=63.2, Expect=3e-10]} {RNA1509_15433, RNA1509_16066} {RNA1310_10060, RNA1509_15433, RNA1509_16066} {RNA1509_15433, RNA1509_16066, RNA815_15971} Mlig455_061867 {REF} {Length: 4419} {TRANSSPLICED} {Pfam: SAP domain [PF02037.29, score=25.5]} {Human: ENSG00000186260, MRTFB, myocardin related transcription factor B, [Score=69.3, Expect=6e-12]} {Mouse: ENSMUSG00000009569, Mkl2, MKL/myocardin-like 2, [Score=81.6, Expect=2e-15]} {Dmel: FBgn0052296, Mrtf, Myocardin-related transcription factor, [Score=58.9, Expect=1e-08]} {Smed: dd_Smed_v6_8558_0_1, dd_Smed_v6_8558_0_1, [Score=63.5, Expect=2e-10]} {RNA1509_15433} {RNA1310_10060} {RNA815_15971} |
| 5. | MligTC455_25047 | 135 | 2.82 | Mlig455_041213 | Neo: - Age: - |
RNF31 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_041213 {REF} {Length: 3533} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=39.2]; E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=27.3]; Domain of unknown function (DUF4573) [PF15140.8, score=21.0]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000092098, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000284845, AL136295.10, novel transcript, [Score=185, Expect=3e-50]; ENSG00000259529, AL136295.5, novel transcript, [Score=185, Expect=3e-50]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=184, Expect=3e-48]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=171, Expect=7e-44]} {Smed: dd_Smed_v6_4074_0_1, dd_Smed_v6_4074_0_1, [RH, Score=134, Expect=1e-32]} {RNA1509_18940} {RNA1310_17723.1} {RNA815_23151} |
| 6. | MligTC455_16981 | 175 | 3.66 | Mlig455_067617 | Neo: Irradiation Age: Up-Down-Up |
ZCCHC10 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_067617 {REF} {Length: 1386} {TRANSSPLICED} {Pfam: Zinc knuckle [PF13917.8, score=50.4]; Nuclear RNA-splicing-associated protein [PF10500.11, score=19.7]} {Human: ENSG00000155329, ZCCHC10, zinc finger CCHC-type containing 10, [RH, Score=63.2, Expect=2e-12]} {Mouse: ENSMUSG00000018239, Zcchc10, zinc finger, CCHC domain containing 10, [RH, Score=60.5, Expect=2e-11]} {Dmel: FBgn0038389, CG5516, [RH, Score=56.2, Expect=4e-10]} {Smed: dd_Smed_v6_6155_0_1, dd_Smed_v6_6155_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_11923, RNA1509_27692, RNA1509_58107} {RNA1310_34233.1, RNA1509_11923, RNA1509_27692, RNA1509_58107} {RNA1509_11923, RNA1509_27692, RNA1509_58107, RNA815_13751.2} |
| 7. | MligTC455_18433 | 17 | 0.36 | Mlig455_054750 | Neo: - Age: - Region-enriched R5: 3.611/0.04620 |
0.95 | - | - | 0.950 | - | - | - | Mlig455_054750 {REF} {Length: 1418} {RNA1509_53910} {RNA1310_24056} {RNA815_30226} | |
| 8. | MligTC455_27055 | 421 | 8.77 | Mlig455_061862 | Neo: - Age: logFC(26M/2M)=-0.501 |
EML2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_061862 {REF} {Length: 6507} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=41.8]; HELP motif [PF03451.16, score=32.4]; WD domain, G-beta repeat [PF00400.34, score=31.7]; PQQ-like domain [PF13360.8, score=19.6]} {Human: ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=273, Expect=3e-78]; ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=260, Expect=2e-73]} {Mouse: ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=278, Expect=6e-80]; ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=267, Expect=3e-76]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=298, Expect=5e-87]} {Smed: dd_Smed_v6_958_0_1, dd_Smed_v6_958_0_1, [Score=244, Expect=7e-69]} {RNA1509_17153} {RNA1310_1430.1} {RNA815_690.1} |
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