TomoSeq data search

Data search

Results for MligTC455_44772

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44772	38325	798.43	Mlig455_007033, Mlig455_069133	Neo: Int S/G2/M Age: logFC(26M/2M)=0.688	RPLP1	Mlig455_007033 {REF} {Length: 519} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_12973, RNA1509_264} {RNA1310_47850, RNA1509_12973, RNA1509_264} {RNA1509_12973, RNA1509_264, RNA815_36874.2} Mlig455_069133 {REF} {Length: 524} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_264, RNA1509_6644} {RNA1310_47850, RNA1509_6644} {RNA1509_6644, RNA815_36874.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44772

38325

798.43

Mlig455_007033, Mlig455_069133

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.688

RPLP1

Mlig455_007033 {REF} {Length: 519} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_12973, RNA1509_264} {RNA1310_47850, RNA1509_12973, RNA1509_264} {RNA1509_12973, RNA1509_264, RNA815_36874.2}

Mlig455_069133 {REF} {Length: 524} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_264, RNA1509_6644} {RNA1310_47850, RNA1509_6644} {RNA1509_6644, RNA815_36874.2}

Cumulative graph for MligTC455_44772

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.876	9.73	0.01714	0.36653
RegionR2	-0.475	9.73	0.12849	0.44461
RegionR3	0.244	9.73	0.36242	0.89805
RegionR4	0.484	9.73	0.09453	0.29630
RegionR5	0.544	9.73	0.03323	0.13958
RegionR6	0.173	9.73	0.51522	1.00000
RegionR7	0.242	9.73	0.34958	0.98641
RegionR8	-0.335	9.73	0.24346	0.86006

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.376	9.73	0.38334	1.00000
RegenerationR2	-0.422	9.73	0.22401	0.67127
RegenerationR3	-0.488	9.73	0.16394	0.59844
RegenerationR4	-0.227	9.73	0.52674	0.88290
RegenerationR5	-0.326	9.73	0.35370	0.76682
RegenerationR6	-0.471	9.73	0.18042	0.51532
RegenerationBL	-0.184	9.73	0.53814	0.89751
RegenerationTP	-0.551	9.73	0.09061	0.47285

Genes with expression patterns similar to MligTC455_44772

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44772	38325	798.43	Mlig455_007033, Mlig455_069133	Neo: Int S/G2/M Age: logFC(26M/2M)=0.688	RPLP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007033 {REF} {Length: 519} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_12973, RNA1509_264} {RNA1310_47850, RNA1509_12973, RNA1509_264} {RNA1509_12973, RNA1509_264, RNA815_36874.2} Mlig455_069133 {REF} {Length: 524} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=90.7]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.3, Expect=6e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [RH, Score=100, Expect=1e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.4, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=69.3, Expect=1e-16]} {RNA1509_264, RNA1509_6644} {RNA1310_47850, RNA1509_6644} {RNA1509_6644, RNA815_36874.2}
2.	MligTC455_44771	19715	410.73	Mlig455_036516	Neo: - Age: Down-Down-Up	RPLP1	5.951	0.998	0.996	0.976	0.997	0.993	0.991	Mlig455_036516 {REF} {Length: 524} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=89.2]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=84.0, Expect=1e-21]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=83.6, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [Score=100, Expect=2e-28]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [RH, Score=89.0, Expect=3e-24]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [RH, Score=68.2, Expect=4e-16]} {RNA1509_12973} {RNA1310_47850} {RNA815_36874.2}
3.	MligTC455_15613	850	17.7	Mlig455_053952, Mlig455_060629	Neo: - Age: -	GOLT1A	0.976	-	-	-	0.976	-	-	Mlig455_053952 {REF} {Length: 892} {NoTransDecoderORF} {RNA1509_27476} {RNA1310_24296.1} {RNA815_10473} Mlig455_060629 {REF} {Length: 1087} {TRANSSPLICED} {Pfam: Got1/Sft2-like family [PF04178.14, score=58.3]} {Human: ENSG00000174567, GOLT1A, golgi transport 1A, [RH, Score=120, Expect=9e-36]} {Mouse: ENSMUSG00000098306, Gm28040, predicted gene, 28040, [RH, Score=125, Expect=6e-38]; ENSMUSG00000103421, Golt1a, golgi transport 1A, [RH, Score=125, Expect=6e-38]} {Dmel: FBgn0052576, CG32576, [RH, Score=132, Expect=2e-40]} {Celegans: WBGene00018270, F41C3.4, Probable Golgi transport protein 1, [RH, Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_5105_0_1, dd_Smed_v6_5105_0_1, [RH, Score=139, Expect=3e-43]} {RNA1509_24282} {RNA1310_24296.1} {RNA815_10473}
4.	MligTC455_39877	321	6.69	Mlig455_068056	Neo: - Age: Down-Up-Down Region-enriched R5: 1.975/0.00587	NOC3L	0.965	-	-	-	0.965	-	-	Mlig455_068056 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Nucleolar complex-associated protein [PF07540.13, score=67.4]} {Human: ENSG00000173145, NOC3L, NOC3 like DNA replication regulator, [Score=180, Expect=9e-48]} {Mouse: ENSMUSG00000024999, Noc3l, NOC3 like DNA replication regulator, [Score=175, Expect=4e-46]} {Dmel: FBgn0037489, CG1234, [Score=141, Expect=7e-35]} {Celegans: WBGene00016508, C37H5.5, Nucleolar complex protein 3 homolog, [Score=118, Expect=1e-27]} {Smed: dd_Smed_v6_13062_0_1, dd_Smed_v6_13062_0_1, [Score=91.7, Expect=2e-19]} {RNA1509_7132} {RNA1310_9494} {RNA815_11181}
5.	MligTC455_54124	453	9.43	Mlig455_057229	Neo: - Age: - Region-enriched R6: 2.179/0.02167	LAMA2	0.964	-	-	-	0.964	-	-	Mlig455_057229 {REF} {Length: 1958} {Pfam: Tropomyosin [PF00261.22, score=76.4]; Tropomyosin like [PF12718.9, score=27.4]; Crescentin protein [PF19220.2, score=20.8]} {Human: ENSG00000196569, LAMA2, laminin subunit alpha 2, [Score=48.9, Expect=5e-06]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=55.5, Expect=4e-09]} {RNA1509_20736} {RNA1310_27668, RNA1509_20736} {RNA1509_20736, RNA815_13494}
6.	MligTC455_26105	77	1.61	Mlig455_009361	Neo: - Age: logFC(26M/2M)=-0.384		0.955	-	-	-	0.955	-	-	Mlig455_009361 {REF} {Length: 3566} {RNA1509_41127} {RNA1310_28777.1} {RNA815_5881.1}
7.	MligTC455_17112	367	7.64	Mlig455_009443	Neo: Irradiation Age: -	MASTL	0.953	-	-	-	0.953	-	-	Mlig455_009443 {REF} {Length: 4371} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=194.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.7]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; Kinase-like [PF14531.8, score=20.8]} {Human: ENSG00000120539, MASTL, microtubule associated serine/threonine kinase like, [RH, Score=203, Expect=4e-56]} {Mouse: ENSMUSG00000026779, Mastl, microtubule associated serine/threonine kinase-like, [RH, Score=201, Expect=3e-55]} {Dmel: FBgn0260399, gwl, greatwall, [RH, Score=203, Expect=3e-56]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [Score=151, Expect=2e-38]} {Smed: dd_Smed_v6_18303_0_1, dd_Smed_v6_18303_0_1, [RH, Score=213, Expect=2e-62]} {RNA1509_21935, RNA1509_60031} {RNA1310_11233.1, RNA1509_21935, RNA1509_60031} {RNA1509_21935, RNA1509_60031, RNA815_11071}