Data search
Results for MligTC455_44775
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44775 | 275 | 5.73 | Mlig455_039825 | Neo: - Age: - |
Mlig455_039825 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=67.2]} {RNA1509_47918, RNA1509_52785, RNA1509_58110} {RNA1310_33338, RNA1509_52785, RNA1509_58110} {RNA1509_52785, RNA1509_58110, RNA815_21208} |
Cumulative graph for MligTC455_44775
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.261 | 3.039 | 0.03934 | 0.48458 | |
| RegionR2 | 1.914 | 3.039 | 0.02811 | 0.18902 | |
| RegionR3 | 1.176 | 3.039 | 0.12590 | 0.61089 | |
| RegionR4 | -0.007 | 3.039 | 0.85540 | 1.00000 | |
| RegionR5 | 0.934 | 3.039 | 0.23298 | 0.54061 | |
| RegionR6 | 1.273 | 3.039 | 0.09997 | 0.58083 | |
| RegionR7 | 0.817 | 3.039 | 0.41903 | 1.00000 | |
| RegionR8 | 1.154 | 3.039 | 0.28069 | 0.90650 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.967 | 3.039 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.057 | 3.039 | 0.91168 | 1.00000 | |
| RegenerationR3 | 0.482 | 3.039 | 0.40655 | 0.80686 | |
| RegenerationR4 | 0.411 | 3.039 | 0.51061 | 0.87463 | |
| RegenerationR5 | 1.195 | 3.039 | 0.01572 | 0.21767 | |
| RegenerationR6 | 0.872 | 3.039 | 0.13217 | 0.44626 | |
| RegenerationBL | 0.356 | 3.039 | 0.66002 | 0.99491 | |
| RegenerationTP | 0.706 | 3.039 | 0.35638 | 0.79706 |
Genes with expression patterns similar to MligTC455_44775
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44775 | 275 | 5.73 | Mlig455_039825 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039825 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=67.2]} {RNA1509_47918, RNA1509_52785, RNA1509_58110} {RNA1310_33338, RNA1509_52785, RNA1509_58110} {RNA1509_52785, RNA1509_58110, RNA815_21208} | |
| 2. | MligTC455_15068 | 150 | 3.12 | Mlig455_060686 | Neo: Irradiation Age: - Region-enriched R5: 2.339/0.00152 Regeneration-upregulated BL: 4.321 Regeneration-enriched BL: 4.321 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_060686 {REF} {Length: 3820} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.0]; C2H2-type zinc finger [PF13894.8, score=23.8]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=53.5, Expect=3e-07]} {RNA1509_40259} {RNA1310_23296, RNA1509_40259} {RNA1509_40259, RNA815_10259} | |
| 3. | MligTC455_23355 | 380 | 7.91 | Mlig455_047433 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169 |
GEMIN5 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032} |
| 4. | MligTC455_36870 | 4127 | 85.99 | Mlig455_035433 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 1.158/0.00049 Regeneration-upregulated BL: 1.133 Regeneration-enriched BL: 1.133 |
H2AFV | 0.962 | - | - | - | - | - | 0.962 | Mlig455_035433 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1310_60280, RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1509_18636, RNA1509_4518, RNA1509_6214, RNA815_1839.1} |
| 5. | MligTC455_36871 | 4132 | 86.08 | Mlig455_061085 | Neo: Irradiation Age: logFC(26M/2M)=0.831 Region-enriched R4: 1.146/0.00083 Regeneration-upregulated BL: 1.165 Regeneration-enriched BL: 1.165 |
H2AFV | 0.958 | - | - | - | - | - | 0.958 | Mlig455_061085 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636} {RNA1310_60280} {RNA815_1839.1} |
| 6. | MligTC455_40257 | 410 | 8.53 | Mlig455_041654 | Neo: - |
TMEM164 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_041654 {REF} {Length: 2003} {Pfam: TMEM164 family [PF14808.8, score=291.1]} {Human: ENSG00000157600, TMEM164, transmembrane protein 164, [RH, Score=213, Expect=4e-67]} {Mouse: ENSMUSG00000047045, Tmem164, transmembrane protein 164, [RH, Score=209, Expect=8e-66]} {Dmel: FBgn0033054, CG14591, [Score=155, Expect=9e-45]} {Celegans: WBGene00007959, C35C5.10, [Score=163, Expect=3e-48]} {Smed: dd_Smed_v6_7500_0_1, dd_Smed_v6_7500_0_1, [Score=239, Expect=5e-77]} {RNA1509_32292} {RNA1310_23119.1} {RNA815_35769.1} |
| 7. | MligTC455_30038 | 10769 | 224.34 | Mlig455_053840, Mlig455_061457 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.282 |
RPLP2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_053840 {REF} {Length: 600} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=96.6]} {Human: ENSG00000177600, RPLP2, ribosomal protein lateral stalk subunit P2, [RH, Score=75.5, Expect=4e-18]} {Mouse: ENSMUSG00000025508, Rplp2, ribosomal protein, large P2, [RH, Score=75.5, Expect=2e-18]} {Dmel: FBgn0003274, RpLP2, Ribosomal protein LP2, [RH, Score=75.9, Expect=1e-18]} {Celegans: WBGene00004410, rla-2, Ribosomal protein, Large subunit, Acidic (P1), [RH, Score=80.9, Expect=8e-21]} {Smed: dd_Smed_v6_556_0_1, dd_Smed_v6_556_0_1, [RH, Score=75.5, Expect=8e-19]} {RNA1509_9757} {RNA1310_62092, RNA1509_9757} {RNA1509_9757, RNA815_31810} Mlig455_061457 {REF} {Length: 1372} |
| 8. | MligTC455_15894 | 262 | 5.45 | Mlig455_061767 | Neo: - Age: logFC(26M/2M)=0.408 |
RABGGTB | 0.952 | - | - | - | - | - | 0.952 | Mlig455_061767 {REF} {Length: 1558} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=184.4]; Squalene-hopene cyclase N-terminal domain [PF13249.8, score=19.3]} {Human: ENSG00000137955, RABGGTB, Rab geranylgeranyltransferase subunit beta, [RH, Score=384, Expect=2e-133]} {Mouse: ENSMUSG00000038975, Rabggtb, Rab geranylgeranyl transferase, b subunit, [RH, Score=374, Expect=9e-130]} {Dmel: FBgn0028970, betaggt-II, beta subunit of type II geranylgeranyl transferase, [RH, Score=362, Expect=5e-125]} {Celegans: WBGene00015099, ggtb-1, Probable geranylgeranyl transferase type-2 subunit beta, [RH, Score=364, Expect=7e-126]} {Smed: dd_Smed_v6_3769_0_1, dd_Smed_v6_3769_0_1, [RH, Score=343, Expect=1e-117]} {RNA1509_42912, RNA1509_43053} {RNA1310_22063, RNA1509_42912, RNA1509_43053} {RNA1509_42912, RNA1509_43053, RNA815_29569} |
| 9. | MligTC455_46531 | 523 | 10.89 | Mlig455_004827, Mlig455_004893, Mlig455_004906 | Neo: Irradiation Age: - Region-enriched R5: 1.899/0.03183 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_004827 {REF} {Length: 3718} {Pfam: Homeodomain [PF00046.31, score=46.2]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=30.3]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=97.1, Expect=2e-20]} {Celegans: WBGene00022861, dve-1, [Score=97.4, Expect=4e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=118, Expect=2e-27]} {RNA1509_42877} {RNA1310_7165.1, RNA1509_42877} {RNA1509_42877, RNA815_36576} Mlig455_004893 {REF} {Length: 3624} {Pfam: Homeodomain [PF00046.31, score=48.6]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=34.1]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=98.2, Expect=8e-21]} {Celegans: WBGene00022861, dve-1, [Score=97.1, Expect=6e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=116, Expect=6e-27]} {RNA1509_42877} {RNA1310_7165.1} {RNA815_36576} Mlig455_004906 {REF} {Length: 3136} {Pfam: Homeodomain [PF00046.31, score=48.5]; Ubiquitin-like oligomerisation domain of SATB [PF16534.7, score=34.0]} {Dmel: FBgn0020307, dve, defective proventriculus, [Score=98.2, Expect=9e-21]} {Celegans: WBGene00022861, dve-1, [Score=98.6, Expect=2e-21]} {Smed: dd_Smed_v6_10184_0_1, dd_Smed_v6_10184_0_1, [RH, Score=118, Expect=2e-27]} {RNA1509_42877} {RNA1310_7165.1} {RNA815_36576} |