TomoSeq data search

Data search

Results for MligTC455_44794

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44794

185

3.84

Mlig455_062676

Neo: -

Age: Down-Up-Up

HOXA1

Mlig455_062676 {REF} {Length: 2336} {Pfam: Homeodomain [PF00046.31, score=76.3]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=120, Expect=1e-29]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=119, Expect=6e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=118, Expect=5e-29]} {Mouse: ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=124, Expect=8e-32]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=121, Expect=2e-30]; ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=120, Expect=8e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=125, Expect=1e-30]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=90.5, Expect=2e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_53134} {RNA1310_11722.1, RNA1509_53134} {RNA1509_53134, RNA815_10354.1}

Cumulative graph for MligTC455_44794

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.086	2.64	1.00000	1.00000
RegionR2	0.817	2.64	0.42407	0.81461
RegionR3	2.494	2.64	0.00322	0.07072
RegionR4	1.47	2.64	0.14907	0.39831
RegionR5	1.362	2.64	0.15454	0.41118
RegionR6	0.479	2.64	0.55978	1.00000
RegionR7	-4.505	2.64	1.00000	1.00000
RegionR8	1.969	2.64	0.20892	0.81010

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.132	2.64	0.99992	1.00000
RegenerationR2	0.098	2.64	0.86492	1.00000
RegenerationR3	-0.424	2.64	0.45504	0.83499
RegenerationR4	0.504	2.64	0.43710	0.83490
RegenerationR5	0.908	2.64	0.11342	0.50772
RegenerationR6	1.051	2.64	0.15730	0.48507
RegenerationBL	2.222	2.64	0.06103	0.28690
RegenerationTP	2.622	2.64	0.10287	0.49765

Genes with expression patterns similar to MligTC455_44794

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44794	185	3.84	Mlig455_062676	Neo: - Age: Down-Up-Up	HOXA1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062676 {REF} {Length: 2336} {Pfam: Homeodomain [PF00046.31, score=76.3]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=120, Expect=1e-29]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=119, Expect=6e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=118, Expect=5e-29]} {Mouse: ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=124, Expect=8e-32]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=121, Expect=2e-30]; ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=120, Expect=8e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=125, Expect=1e-30]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=90.5, Expect=2e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_53134} {RNA1310_11722.1, RNA1509_53134} {RNA1509_53134, RNA815_10354.1}
2.	MligTC455_45572	697	14.53	Mlig455_014345	Neo: - Age: - Region-enriched R4: 2.663/0.00001 Region-enriched R3: 1.769/0.00087 Region-enriched R5: 1.541/0.00135 Region-enriched R6: 1.390/0.04169	CRYL1	1.78	-	-	-	0.811	-	0.969	Mlig455_014345 {REF} {Length: 1372} {Pfam: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=152.8]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.24, score=40.7]} {Human: ENSG00000165475, CRYL1, crystallin lambda 1, [RH, Score=275, Expect=6e-91]} {Mouse: ENSMUSG00000021947, Cryl1, crystallin, lambda 1, [RH, Score=261, Expect=7e-86]} {Dmel: FBgn0030737, CG9914, [RH, Score=287, Expect=4e-96]} {Celegans: WBGene00022130, Y71F9B.9, [RH, Score=249, Expect=2e-81]} {Smed: dd_Smed_v6_1696_0_1, dd_Smed_v6_1696_0_1, [RH, Score=176, Expect=6e-53]} {RNA1509_34725} {RNA1310_23652} {RNA815_8421.1}
3.	MligTC455_13458	928	19.33	Mlig455_024267, Mlig455_024269	Neo: - Age: - Region-enriched R3: 2.154/0.00126		1.701	0.743	-	-	-	-	0.958	Mlig455_024267 {REF} {Length: 4032} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_53660} {RNA1310_12023.1} {RNA815_3958.1} Mlig455_024269 {REF} {Length: 3882} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1310_12023.1, RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360, RNA815_3958.1}
4.	MligTC455_07965	20	0.41	Mlig455_022984	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_022984 {REF} {Length: 2834} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_48890} {RNA815_24918}
5.	MligTC455_26795	815	16.98	Mlig455_032453	Neo: - Age: logFC(26M/2M)=1.207 Region-enriched R4: 1.778/0.04706		0.961	-	-	-	-	-	0.961	Mlig455_032453 {REF} {Length: 1116} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
6.	MligTC455_26796	887	18.48	Mlig455_068756	Neo: - Age: Up-Down-Up Region-enriched R4: 1.850/0.01920		0.958	-	-	-	-	-	0.958	Mlig455_068756 {REF} {Length: 1086} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
7.	MligTC455_22825	35	0.73	Mlig455_065147	Neo: - Age: Up-Down-Down		0.957	-	-	-	-	-	0.957	Mlig455_065147 {REF} {Length: 3482} {RNA1509_31773} {RNA1310_14428} {RNA815_10931}
8.	MligTC455_15393	440	9.16	Mlig455_043266, Mlig455_043292	Neo: - Age: -	PLA2G7	0.956	-	-	-	-	-	0.956	Mlig455_043266 {REF} {Length: 3292} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.8]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.1]; Alpha/beta hydrolase family [PF12697.9, score=20.7]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=148, Expect=5e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=150, Expect=9e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=139, Expect=4e-37]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1} Mlig455_043292 {REF} {Length: 3289} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.9]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.6]; Alpha/beta hydrolase family [PF12697.9, score=20.9]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=149, Expect=3e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=151, Expect=6e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=137, Expect=2e-36]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1}
9.	MligTC455_39584	1076	22.42	Mlig455_040074	Neo: Int S/G2/M Age: -	EIF4EBP2	0.956	-	-	-	-	-	0.956	Mlig455_040074 {REF} {Length: 1276} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) [PF05456.13, score=111.2]} {Human: ENSG00000148730, EIF4EBP2, eukaryotic translation initiation factor 4E binding protein 2, [Score=97.1, Expect=3e-26]} {Mouse: ENSMUSG00000020091, Eif4ebp2, eukaryotic translation initiation factor 4E binding protein 2, [Score=94.4, Expect=3e-25]} {Dmel: FBgn0261560, Thor, [Score=67.4, Expect=6e-15]} {Smed: dd_Smed_v6_1204_0_1, dd_Smed_v6_1204_0_1, [Score=76.6, Expect=6e-19]} {RNA1509_17968, RNA1509_42758, RNA1509_50812} {RNA1310_23259, RNA1509_17968, RNA1509_42758, RNA1509_50812} {RNA1509_17968, RNA1509_42758, RNA1509_50812, RNA815_11889.1}
10.	MligTC455_33715	36	0.75	Mlig455_048624, Mlig455_048741	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_048624 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_54597} {RNA1310_113588} {RNA815_29533} Mlig455_048741 {REF} {Length: 651} {RNA1310_113588} {RNA815_29533}
11.	MligTC455_49548	163	3.4	Mlig455_028627	Neo: - Age: -	NR6A1	0.951	-	-	0.951	-	-	-	Mlig455_028627 {REF} {Length: 4064} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.2]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=65.1, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.0, Expect=6e-12]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.5, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=6e-14]} {RNA1509_44831, RNA1509_56197} {RNA1310_45687.1, RNA1509_44831} {RNA1509_44831, RNA815_27369.2}

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