M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13458

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13458 928 19.33 Mlig455_024267, Mlig455_024269

Neo: -

Age: -

Region-enriched R3: 2.154/0.00126

Mlig455_024267 {REF} {Length: 4032} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_53660} {RNA1310_12023.1} {RNA815_3958.1}

Mlig455_024269 {REF} {Length: 3882} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1310_12023.1, RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360, RNA815_3958.1}

Cumulative graph for MligTC455_13458

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.53 4.622 0.67597 1.00000
RegionR2 -0.057 4.622 0.93915 1.00000
RegionR3 2.154 4.622 0.00002 0.00126
RegionR4 0.008 4.622 0.98627 1.00000
RegionR5 0.519 4.622 0.30085 0.63634
RegionR6 0.684 4.622 0.22267 0.80289
RegionR7 -2.2 4.622 0.01063 0.17848
RegionR8 -0.579 4.622 0.50634 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.634 4.622 0.75907 1.00000
RegenerationR2 1.067 4.622 0.11168 0.52213
RegenerationR3 0.295 4.622 0.65544 0.93122
RegenerationR4 1.215 4.622 0.09201 0.47371
RegenerationR5 1.433 4.622 0.03076 0.29325
RegenerationR6 0.839 4.622 0.21194 0.55546
RegenerationBL 1.784 4.622 0.01326 0.11880
RegenerationTP 2.961 4.622 0.00016 0.01613


Genes with expression patterns similar to MligTC455_13458

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13458 928 19.33 Mlig455_024267, Mlig455_024269

Neo: -

Age: -

Region-enriched R3: 2.154/0.00126

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_024267 {REF} {Length: 4032} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_53660} {RNA1310_12023.1} {RNA815_3958.1}

Mlig455_024269 {REF} {Length: 3882} {TRANSSPLICED} {Dmel: FBgn0039113, CG10217, [RH, Score=308, Expect=2e-96]} {Smed: dd_Smed_v6_2624_0_1, dd_Smed_v6_2624_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1310_12023.1, RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360} {RNA1509_24344, RNA1509_29477, RNA1509_40857, RNA1509_53660, RNA1509_54476, RNA1509_9360, RNA815_3958.1}
2. MligTC455_24859 5590 116.45 Mlig455_054066, Mlig455_063284

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.306

Region-enriched R3: 2.202/0.00434

 3.49 0.870 0.770 - 0.960 - 0.890

Mlig455_054066 {REF} {Length: 1406} {RNA1509_33411, RNA1509_7753} {RNA1310_22791, RNA1509_33411} {RNA1509_33411, RNA815_10514.1}

Mlig455_063284 {REF} {Length: 1414} {Pfam: Multi-glycosylated core protein 24 (MGC-24), sialomucin [PF05283.13, score=46.5]} {Mouse: ENSMUSG00000050912, Tmem123, transmembrane protein 123, [Score=46.6, Expect=2e-06]} {Dmel: FBgn0045823, vsg, visgun, [Score=53.1, Expect=8e-09]} {Smed: dd_Smed_v6_828_0_1, dd_Smed_v6_828_0_1, [RH, Score=53.5, Expect=2e-10]} {RNA1509_7753} {RNA1310_22791} {RNA815_10514.1}
3. MligTC455_37298 680 14.17 Mlig455_052018, Mlig455_057237

Neo: -

Age: logFC(26M/2M)=-0.343

Region-enriched R3: 2.210/0.00000

 3.446 0.852 0.811 - 0.954 - 0.829

Mlig455_052018 {REF} {Length: 2901} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA1509_59956} {RNA1310_23555, RNA1509_34561, RNA1509_39488, RNA1509_48225} {RNA1509_34561, RNA1509_39488, RNA1509_48225, RNA815_9532}

Mlig455_057237 {REF} {Length: 2860} {Pfam: Innexin [PF00876.20, score=316.7]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=93.2, Expect=1e-20]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=275, Expect=9e-89]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=267, Expect=7e-86]} {RNA1509_28177, RNA1509_45524} {RNA1310_23555, RNA1509_28177, RNA1509_45524} {RNA1509_28177, RNA1509_45524, RNA815_9532}
4. MligTC455_49088 1114 23.21 Mlig455_011516

Neo: -

Age: -

Region-enriched R3: 1.223/0.01828
Region-enriched R4: 1.176/0.03574

 2.536 0.783 0.795 - 0.958 - - Mlig455_011516 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_33665, RNA1509_7916} {RNA1310_16594, RNA1509_33665} {RNA1509_33665, RNA815_8276}
5. MligTC455_48966 1196 24.92 Mlig455_011970

Neo: -

Age: logFC(26M/2M)=0.730

Region-enriched R4: 2.185/0.00002
Region-enriched R5: 1.169/0.00499

 1.884 - - - 0.954 - 0.930 Mlig455_011970 {REF} {Length: 667} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.6]} {RNA1509_11772} {RNA1310_19739.1} {RNA815_20380}
6. MligTC455_24962 365 7.6 Mlig455_010262

Neo: -

Age: -

Region-enriched R3: 2.305/0.00050

 ABCC1 1.881 0.960 - - - - 0.921 Mlig455_010262 {REF} {Length: 5982} {Pfam: ABC transporter transmembrane region [PF00664.25, score=251.6]; ABC transporter [PF00005.29, score=174.9]; 50S ribosome-binding GTPase [PF01926.25, score=29.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=29.8]; AAA ATPase domain [PF13191.8, score=25.4]; RsgA GTPase [PF03193.18, score=22.0]; P-loop containing region of AAA domain [PF13555.8, score=21.5]; Dynamin family [PF00350.25, score=19.7]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1432, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [RH, Score=1432, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [RH, Score=1415, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [RH, Score=1436, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [RH, Score=1417, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [RH, Score=1425, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [RH, Score=1211, Expect=0.0]} {Smed: dd_Smed_v6_6609_0_1, dd_Smed_v6_6609_0_1, [RH, Score=1689, Expect=0.0]} {RNA1509_3541} {RNA1310_660, RNA1509_3541} {RNA1509_3541, RNA815_1295}
7. MligTC455_24961 372 7.76 Mlig455_010250

Neo: -

Age: Up-Down-Down

Region-enriched R3: 2.273/0.00043

 ABCC1 1.867 0.952 - - - - 0.915 Mlig455_010250 {REF} {Length: 1326} {Pfam: ABC transporter transmembrane region [PF00664.25, score=124.4]; ABC transporter [PF00005.29, score=99.5]; RecF/RecN/SMC N terminal domain [PF02463.21, score=26.9]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=691, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=691, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=684, Expect=0.0]} {Mouse: ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=688, Expect=0.0]; ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=678, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=724, Expect=0.0]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=640, Expect=0.0]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=790, Expect=0.0]} {RNA1509_27415} {RNA1310_660} {RNA815_1295}
8. MligTC455_53355 1190 24.78 Mlig455_033338, Mlig455_033357

Neo: -

Age: -

Region-enriched R4: 1.851/0.00149

 1.827 - - - 0.952 - 0.875

Mlig455_033338 {REF} {Length: 1291} {RNA1509_14712, RNA1509_46611} {RNA1310_36401.2, RNA1509_46611} {RNA1509_46611, RNA815_17710}

Mlig455_033357 {REF} {Length: 973} {TRANSSPLICED} {RNA1509_14712} {RNA1310_36401.2} {RNA815_17710}
9. MligTC455_53356 1170 24.37 Mlig455_033344, Mlig455_033363

Neo: -

Age: -

Region-enriched R4: 2.114/0.00122
Region-enriched R5: 1.062/0.04423

 TMED7 1.821 - - - 0.958 - 0.863

Mlig455_033344 {REF} {Length: 1935} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=115.7]} {Human: ENSG00000134970, TMED7, transmembrane p24 trafficking protein 7, [Score=110, Expect=2e-29]} {Mouse: ENSMUSG00000033184, Tmed7, transmembrane p24 trafficking protein 7, [Score=110, Expect=3e-29]} {Dmel: FBgn0030341, p24-1, p24-related-1, [Score=116, Expect=6e-32]} {Celegans: WBGene00019003, F57B10.5, [Score=97.8, Expect=5e-25]} {Smed: dd_Smed_v6_2557_0_1, dd_Smed_v6_2557_0_1, [Score=98.2, Expect=4e-25]} {RNA1509_14712} {RNA1310_32912, RNA1509_14712} {RNA1509_14712, RNA815_16911}

Mlig455_033363 {REF} {Length: 1946} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=115.8]} {Human: ENSG00000134970, TMED7, transmembrane p24 trafficking protein 7, [Score=110, Expect=2e-29]} {Mouse: ENSMUSG00000033184, Tmed7, transmembrane p24 trafficking protein 7, [Score=110, Expect=2e-29]} {Dmel: FBgn0030341, p24-1, p24-related-1, [Score=114, Expect=2e-31]} {Celegans: WBGene00019003, F57B10.5, [Score=97.4, Expect=8e-25]} {Smed: dd_Smed_v6_2557_0_1, dd_Smed_v6_2557_0_1, [Score=98.6, Expect=3e-25]} {RNA1509_14712} {RNA1310_32912} {RNA815_16911}
10. MligTC455_16596 157 3.28 Mlig455_065294

Neo: -

Age: -

 SLC26A3 1.801 - - - 0.845 - 0.956 Mlig455_065294 {REF} {Length: 4967} {Pfam: Sulfate permease family [PF00916.22, score=330.5]; STAS domain [PF01740.23, score=83.3]} {Human: ENSG00000091138, SLC26A3, solute carrier family 26 member 3, [RH, Score=365, Expect=5e-113]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=358, Expect=4e-110]; ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=358, Expect=1e-110]; ENSMUSG00000107138, Slc26a6, solute carrier family 26, member 6, [Score=341, Expect=1e-105]; ENSMUSG00000023259, Slc26a6, solute carrier family 26, member 6, [Score=341, Expect=1e-105]} {Dmel: FBgn0036770, Prestin, [Score=282, Expect=1e-82]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=285, Expect=4e-85]} {Smed: dd_Smed_v6_8150_0_1, dd_Smed_v6_8150_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_13299} {RNA1310_2464.1} {RNA815_2661}
11. MligTC455_15393 440 9.16 Mlig455_043266, Mlig455_043292

Neo: -

Age: -

 PLA2G7 1.749 - - - 0.794 - 0.955

Mlig455_043266 {REF} {Length: 3292} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.8]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.1]; Alpha/beta hydrolase family [PF12697.9, score=20.7]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=148, Expect=5e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=150, Expect=9e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=139, Expect=4e-37]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1}

Mlig455_043292 {REF} {Length: 3289} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.9]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.6]; Alpha/beta hydrolase family [PF12697.9, score=20.9]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=149, Expect=3e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=151, Expect=6e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=137, Expect=2e-36]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1}
12. MligTC455_28526 593 12.36 Mlig455_056211, Mlig455_056221

Neo: -

Age: -

Region-enriched R4: 2.101/0.03632
Region-enriched R5: 1.897/0.01233

 OCA2 1.717 - - - 0.959 - 0.758

Mlig455_056211 {REF} {Length: 5739} {Pfam: Citrate transporter [PF03600.18, score=173.5]; Metallopeptidase family M24 [PF00557.26, score=104.5]; Sodium:sulfate symporter transmembrane region [PF00939.21, score=57.9]; C-terminal region of peptidase_M24 [PF16188.7, score=47.6]; Arsenical pump membrane protein [PF02040.17, score=19.4]} {Human: ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [RH, Score=596, Expect=0.0]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0041150, hoe1, hoepel1, [RH, Score=540, Expect=7e-175]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=172, Expect=8e-45]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_12085} {RNA1310_6295.2} {RNA815_1356.1}

Mlig455_056221 {REF} {Length: 7398} {Pfam: Citrate transporter [PF03600.18, score=113.0]; Metallopeptidase family M24 [PF00557.26, score=107.5]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=73.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=53.3]; C-terminal region of peptidase_M24 [PF16188.7, score=47.7]; Arsenical pump membrane protein [PF02040.17, score=20.6]; Dicarboxylate carrier protein MatC N-terminus [PF07158.13, score=19.0]} {Human: ENSG00000277361, OCA2, OCA2 melanosomal transmembrane protein, [Score=330, Expect=2e-97]; ENSG00000104044, OCA2, OCA2 melanosomal transmembrane protein, [Score=329, Expect=3e-96]} {Mouse: ENSMUSG00000030450, Oca2, oculocutaneous albinism II, [Score=320, Expect=2e-93]} {Dmel: FBgn0041150, hoe1, hoepel1, [Score=278, Expect=4e-79]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [Score=217, Expect=1e-59]} {Smed: dd_Smed_v6_5800_0_1, dd_Smed_v6_5800_0_1, [Score=348, Expect=8e-105]} {RNA1509_12085, RNA1509_56882} {RNA1310_6295.2, RNA1509_56882} {RNA1509_56882, RNA815_1356.1}
13. MligTC455_44794 185 3.84 Mlig455_062676

Neo: -

Age: Down-Up-Up

 HOXA1 1.701 0.743 - - - - 0.958 Mlig455_062676 {REF} {Length: 2336} {Pfam: Homeodomain [PF00046.31, score=76.3]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=120, Expect=1e-29]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=119, Expect=6e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=118, Expect=5e-29]} {Mouse: ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=124, Expect=8e-32]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=121, Expect=2e-30]; ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=120, Expect=8e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=125, Expect=1e-30]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=90.5, Expect=2e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_53134} {RNA1310_11722.1, RNA1509_53134} {RNA1509_53134, RNA815_10354.1}
14. MligTC455_19520 711 14.82 Mlig455_018524

Neo: -

Age: logFC(26M/2M)=-0.243

 PTDSS2 0.958 - - - - - 0.958 Mlig455_018524 {REF} {Length: 3134} {TRANSSPLICED} {Pfam: Phosphatidyl serine synthase [PF03034.17, score=388.0]} {Human: ENSG00000174915, PTDSS2, phosphatidylserine synthase 2, [Score=480, Expect=7e-167]} {Mouse: ENSMUSG00000025495, Ptdss2, phosphatidylserine synthase 2, [Score=483, Expect=3e-168]} {Dmel: FBgn0037010, CG4825, [Score=269, Expect=1e-84]} {Celegans: WBGene00012095, pssy-2, PhosphatidylSerine SYnthase, [Score=275, Expect=3e-86]} {Smed: dd_Smed_v6_7678_0_1, dd_Smed_v6_7678_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982} {RNA1310_5581, RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982} {RNA1509_10186, RNA1509_15443, RNA1509_19161, RNA1509_25562, RNA1509_26982, RNA815_3642.1}
15. MligTC455_27610 370 7.71 Mlig455_022082, Mlig455_066623

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.161/0.03987

 HIST1H2BK 0.958 - - - - - 0.958

Mlig455_022082 {REF} {Length: 491} {NoTransDecoderORF} {RNA1310_39046} {RNA815_41302}

Mlig455_066623 {REF} {Length: 2228} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=83.5]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=29.7]; YscO-like protein [PF16789.7, score=19.2]} {Human: ENSG00000197903, HIST1H2BK, histone cluster 1 H2B family member k, [RH, Score=197, Expect=6e-66]; ENSG00000276410, HIST1H2BB, histone cluster 1 H2B family member b, [RH, Score=197, Expect=1e-65]; ENSG00000124635, HIST1H2BJ, histone cluster 1 H2B family member j, [RH, Score=197, Expect=4e-66]; ENSG00000274641, HIST1H2BO, histone cluster 1 H2B family member o, [RH, Score=196, Expect=1e-65]; ENSG00000158373, HIST1H2BD, histone cluster 1 H2B family member d, [RH, Score=196, Expect=2e-65]; ENSG00000233822, HIST1H2BN, histone cluster 1 H2B family member n, [RH, Score=196, Expect=2e-65]; ENSG00000277224, HIST1H2BF, histone cluster 1 H2B family member f, [RH, Score=196, Expect=2e-65]; ENSG00000274290, HIST1H2BE, histone cluster 1 H2B family member e, [RH, Score=196, Expect=2e-65]; ENSG00000184678, HIST2H2BE, histone cluster 2 H2B family member e, [RH, Score=196, Expect=1e-65]; ENSG00000275713, HIST1H2BH, histone cluster 1 H2B family member h, [RH, Score=196, Expect=2e-65]; ENSG00000273802, HIST1H2BG, histone cluster 1 H2B family member g, [RH, Score=196, Expect=2e-65]; ENSG00000278588, HIST1H2BI, histone cluster 1 H2B family member i, [RH, Score=196, Expect=2e-65]; ENSG00000180596, HIST1H2BC, histone cluster 1 H2B family member c, [RH, Score=196, Expect=2e-65]; ENSG00000273703, HIST1H2BM, histone cluster 1 H2B family member m, [RH, Score=195, Expect=5e-65]; ENSG00000234289, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000274559, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000203814, HIST2H2BF, histone cluster 2 H2B family member f, [RH, Score=194, Expect=1e-64]; ENSG00000185130, HIST1H2BL, histone cluster 1 H2B family member l, [RH, Score=192, Expect=5e-64]; ENSG00000146047, HIST1H2BA, histone cluster 1 H2B family member a, [RH, Score=190, Expect=5e-63]} {Mouse: ENSMUSG00000058385, Hist1h2bg, histone cluster 1, H2bg, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114279, Hist1h2bm, histone cluster 1, H2bm, [RH, Score=196, Expect=1e-65]; ENSMUSG00000047246, Hist1h2be, histone cluster 1, H2be, [RH, Score=196, Expect=1e-65]; ENSMUSG00000018102, Hist1h2bc, histone cluster 1, H2bc, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114456, Hist1h2bh, histone cluster 1, H2bh, [RH, Score=196, Expect=1e-65]; ENSMUSG00000062727, Hist1h2bk, histone cluster 1, H2bk, [RH, Score=194, Expect=6e-65]; ENSMUSG00000105827, Hist2h2bb, histone cluster 2, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000075031, Hist1h2bb, histone cluster 1, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000095217, Hist1h2bn, histone cluster 1, H2bn, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069268, Hist1h2bf, histone cluster 1, H2bf, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069303, Hist1h2br, histone cluster 1 H2br, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069300, Hist1h2bj, histone cluster 1, H2bj, [RH, Score=193, Expect=2e-64]; ENSMUSG00000094338, Hist1h2bl, histone cluster 1, H2bl, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069307, Hist1h2bq, histone cluster 1, H2bq, [RH, Score=193, Expect=2e-64]; ENSMUSG00000068854, Hist2h2be, histone cluster 2, H2be, [RH, Score=192, Expect=3e-64]; ENSMUSG00000069308, Hist1h2bp, histone cluster 1, H2bp, [RH, Score=192, Expect=5e-64]; ENSMUSG00000050799, Hist1h2ba, histone cluster 1, H2ba, [RH, Score=189, Expect=4e-63]} {Dmel: FBgn0061209, His2B:CG17949, [RH, Score=178, Expect=1e-58]} {Celegans: WBGene00001915, his-41, Probable histone H2B 3, [RH, Score=188, Expect=1e-62]} {Smed: dd_Smed_v6_879_0_1, dd_Smed_v6_879_0_1, [RH, Score=197, Expect=2e-66]} {RNA1509_28769} {RNA1310_21486.1, RNA1509_28769} {RNA1509_28769, RNA815_22759.2}
16. MligTC455_28216 43 0.9 Mlig455_030819

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_030819 {REF} {Length: 1589} {RNA1509_25000} {RNA1310_13919} {RNA815_45503.1}
17. MligTC455_34719 5412 112.75 Mlig455_062958

Neo: -

Age: -

 ATP5MG 0.956 - - - 0.956 - - Mlig455_062958 {REF} {Length: 713} {TRANSSPLICED} {Pfam: Mitochondrial ATP synthase g subunit [PF04718.17, score=73.0]} {Human: ENSG00000167283, ATP5MG, ATP synthase membrane subunit g, [RH, Score=89.7, Expect=3e-24]} {Mouse: ENSMUSG00000038717, Atp5l, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, [RH, Score=87.4, Expect=2e-23]; ENSMUSG00000096486, Gm5426, predicted pseudogene 5426, [RH, Score=85.5, Expect=1e-22]} {Dmel: FBgn0010612, ATPsynG, ATP synthase, [RH, Score=82.0, Expect=1e-21]} {Celegans: WBGene00000209, asg-1, Probable ATP synthase subunit g 1, mitochondrial, [RH, Score=66.6, Expect=2e-15]} {Smed: dd_Smed_v6_428_0_1, dd_Smed_v6_428_0_1, [RH, Score=88.2, Expect=4e-24]} {RNA1509_1775} {RNA1310_44478.1, RNA1509_1775} {RNA1509_1775, RNA815_24565.1}
18. MligTC455_50158 531 11.07 Mlig455_032079

Neo: -

Age: Up-Down-Down

 DHRS4 0.956 - - - - - 0.956 Mlig455_032079 {REF} {Length: 6289} {Pfam: AMP-binding enzyme [PF00501.30, score=257.3]; Male sterility protein [PF07993.14, score=180.5]; short chain dehydrogenase [PF00106.27, score=177.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=141.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=70.7]; Phosphopantetheine attachment site [PF00550.27, score=56.6]; KR domain [PF08659.12, score=45.1]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=42.2]; AMP-binding enzyme C-terminal domain [PF13193.8, score=37.1]; NAD(P)H-binding [PF13460.8, score=36.9]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.7]; RmlD substrate binding domain [PF04321.19, score=26.1]; Polysaccharide biosynthesis protein [PF02719.17, score=25.0]; NmrA-like family [PF05368.15, score=21.3]} {Human: ENSG00000284807, DHRS4, dehydrogenase/reductase 4, [Score=107, Expect=9e-25]; ENSG00000157326, DHRS4, dehydrogenase/reductase 4, [Score=107, Expect=9e-25]; ENSG00000278535, DHRS11, dehydrogenase/reductase 11, [Score=104, Expect=6e-24]; ENSG00000275397, DHRS11, dehydrogenase/reductase 11, [Score=104, Expect=6e-24]} {Mouse: ENSMUSG00000034449, Dhrs11, dehydrogenase/reductase (SDR family) member 11, [Score=103, Expect=7e-24]; ENSMUSG00000034528, Hsd17b13, hydroxysteroid (17-beta) dehydrogenase 13, [Score=99.4, Expect=4e-22]; ENSMUSG00000109482, Gm4756, predicted gene 4756, [Score=99.0, Expect=1e-21]; ENSMUSG00000022209, Dhrs2, dehydrogenase/reductase member 2, [Score=98.6, Expect=5e-22]; ENSMUSG00000027195, Hsd17b12, hydroxysteroid (17-beta) dehydrogenase 12, [Score=98.2, Expect=1e-21]} {Dmel: FBgn0000527, e, ebony, [RH, Score=184, Expect=2e-47]} {Celegans: WBGene00021646, Y47G6A.21, [Score=101, Expect=2e-23]} {Smed: dd_Smed_v6_7198_0_1, dd_Smed_v6_7198_0_1, [RH, Score=1223, Expect=0.0]} {RNA1509_4155, RNA1509_54472} {RNA1310_1184, RNA1509_54472} {RNA1509_54472, RNA815_1128}
19. MligTC455_35520 80 1.67 Mlig455_014702

Neo: -

Age: logFC(26M/2M)=0.557

Region-enriched R4: 4.213/0.03157

 SLC44A2 0.954 - - - - - 0.954 Mlig455_014702 {REF} {Length: 3061} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=312.8]} {Human: ENSG00000129353, SLC44A2, solute carrier family 44 member 2, [Score=436, Expect=9e-143]} {Mouse: ENSMUSG00000057193, Slc44a2, solute carrier family 44, member 2, [Score=451, Expect=1e-148]} {Dmel: FBgn0039637, Ctl2, Choline transporter-like 2, [Score=315, Expect=4e-96]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=374, Expect=3e-119]} {Smed: dd_Smed_v6_6488_0_1, dd_Smed_v6_6488_0_1, [Score=434, Expect=8e-142]} {RNA1509_14161, RNA1509_44684, RNA1509_55504} {RNA1310_8213, RNA1509_44684, RNA1509_55504} {RNA1509_44684, RNA1509_55504, RNA815_109}
20. MligTC455_40527 62 1.29 Mlig455_021888

Neo: -

Age: Down-Down-Down

 0.951 - - - - - 0.951 Mlig455_021888 {REF} {Length: 3286} {Pfam: Indigoidine synthase A like protein [PF04227.14, score=358.7]; pfkB family carbohydrate kinase [PF00294.26, score=33.7]} {Dmel: FBgn0031265, CG2794, [Score=300, Expect=5e-93]} {Celegans: WBGene00020765, T24C12.3, [Score=251, Expect=8e-75]} {Smed: dd_Smed_v6_5339_0_1, dd_Smed_v6_5339_0_1, [Score=275, Expect=1e-83]} {RNA1509_58327} {RNA1310_13708} {RNA815_13307}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA