Data search
Results for MligTC455_44821
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44821 | 96 | 2.00 | Mlig455_036034 | Neo: - Age: Down-Down-Down |
Mlig455_036034 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=405.0]; Sulfotransferase family [PF13469.8, score=48.5]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=165, Expect=9e-48]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006} |
Cumulative graph for MligTC455_44821
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.593 | 2.102 | 0.54473 | 1.00000 | |
| RegionR2 | 1.578 | 2.102 | 0.27285 | 0.65758 | |
| RegionR3 | 1.526 | 2.102 | 0.17518 | 0.70287 | |
| RegionR4 | 1.09 | 2.102 | 0.44059 | 0.76943 | |
| RegionR5 | 1.063 | 2.102 | 0.31099 | 0.64973 | |
| RegionR6 | 1.171 | 2.102 | 0.30940 | 0.89945 | |
| RegionR7 | -1.759 | 2.102 | 0.99884 | 1.00000 | |
| RegionR8 | -1.076 | 2.102 | 0.99170 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.052 | 2.102 | 0.99987 | 1.00000 | |
| RegenerationR2 | -0.174 | 2.102 | 0.82779 | 0.99678 | |
| RegenerationR3 | -1.013 | 2.102 | 0.28438 | 0.71613 | |
| RegenerationR4 | -0.495 | 2.102 | 0.64216 | 0.92871 | |
| RegenerationR5 | 0.426 | 2.102 | 0.61480 | 0.91655 | |
| RegenerationR6 | -1.059 | 2.102 | 0.29274 | 0.64337 | |
| RegenerationBL | 2.208 | 2.102 | 0.10061 | 0.37286 | |
| RegenerationTP | 1.176 | 2.102 | 0.54365 | 0.92879 |
Genes with expression patterns similar to MligTC455_44821
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44821 | 96 | 2 | Mlig455_036034 | Neo: - Age: Down-Down-Down |
5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_036034 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=405.0]; Sulfotransferase family [PF13469.8, score=48.5]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=165, Expect=9e-48]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006} | |
| 2. | MligTC455_44823 | 63 | 1.31 | Mlig455_036159 | Neo: - Age: Down-Down-Down |
4.42 | 0.993 | 0.963 | 0.877 | - | 0.805 | 0.782 | Mlig455_036159 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=290.8]; Sulfotransferase family [PF13469.8, score=46.8]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=144, Expect=4e-41]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006} | |
| 3. | MligTC455_41851 | 218 | 4.53 | Mlig455_018663 | Neo: - Age: Up-Down-Up |
LZTR1 | 1.829 | - | - | - | - | 0.964 | 0.865 | Mlig455_018663 {REF} {Length: 3341} {Pfam: Galactose oxidase, central domain [PF13418.8, score=122.6]; BTB/POZ domain [PF00651.33, score=114.9]; Kelch motif [PF13964.8, score=114.0]; Kelch motif [PF13854.8, score=109.2]; Galactose oxidase, central domain [PF13415.8, score=102.7]; Kelch motif [PF01344.27, score=101.8]; Kelch motif [PF07646.17, score=57.0]; BTB And C-terminal Kelch [PF07707.17, score=19.7]} {Human: ENSG00000099949, LZTR1, leucine zipper like transcription regulator 1, [RH, Score=617, Expect=0.0]} {Mouse: ENSMUSG00000022761, Lztr1, leucine-zipper-like transcriptional regulator, 1, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0040344, CG3711, [RH, Score=625, Expect=0.0]} {Celegans: WBGene00001827, hcf-1, HCF1 related; Host cell factor 1, [Score=52.4, Expect=1e-06]} {Smed: dd_Smed_v6_11553_0_1, dd_Smed_v6_11553_0_1, [Score=75.9, Expect=7e-15]} {RNA1509_10391} {RNA1310_8211, RNA1509_10391} {RNA1509_10391, RNA815_3124} |
| 4. | MligTC455_48887 | 342 | 7.12 | Mlig455_068740 | Neo: - Age: - Region-enriched R5: 2.022/0.00015 |
1.698 | - | 0.746 | - | - | - | 0.952 | Mlig455_068740 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.4]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1} {RNA815_561.1} | |
| 5. | MligTC455_53999 | 175 | 3.65 | Mlig455_031065 | Neo: - Age: - |
ZNF668 | 1.675 | - | - | 0.718 | - | - | 0.957 | Mlig455_031065 {REF} {Length: 1242} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=58.2]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double domain [PF13465.8, score=35.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=21.7]} {Human: ENSG00000167394, ZNF668, zinc finger protein 668, [Score=114, Expect=5e-29]; ENSG00000141946, ZIM3, zinc finger imprinted 3, [Score=114, Expect=5e-29]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=112, Expect=3e-28]; ENSG00000171649, ZIK1, zinc finger protein interacting with K protein 1, [Score=110, Expect=8e-28]; ENSG00000196152, ZNF79, zinc finger protein 79, [Score=109, Expect=2e-27]; ENSG00000099326, MZF1, myeloid zinc finger 1, [Score=109, Expect=3e-27]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=114, Expect=5e-29]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=114, Expect=6e-29]; ENSMUSG00000030393, Zik1, zinc finger protein interacting with K protein 1, [Score=110, Expect=5e-28]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=100, Expect=3e-24]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=88.6, Expect=1e-21]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=94.7, Expect=4e-23]} {RNA1509_49200, RNA1509_59469} {RNA1310_30149, RNA1509_49200, RNA1509_59469} {RNA1509_49200, RNA1509_59469, RNA815_12591} |
| 6. | MligTC455_17068 | 180 | 3.74 | Mlig455_055276 | Neo: - Age: - |
ADCY5 | 0.98 | - | - | - | - | - | 0.980 | Mlig455_055276 {REF} {Length: 1899} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=170.8]} {Human: ENSG00000173175, ADCY5, adenylate cyclase 5, [Score=244, Expect=2e-70]; ENSG00000174233, ADCY6, adenylate cyclase 6, [Score=240, Expect=2e-68]} {Mouse: ENSMUSG00000022840, Adcy5, adenylate cyclase 5, [Score=249, Expect=2e-71]; ENSMUSG00000022994, Adcy6, adenylate cyclase 6, [Score=248, Expect=3e-71]} {Dmel: FBgn0263131, CG43373, [Score=238, Expect=8e-68]} {Celegans: WBGene00000071, acy-4, Adenylyl CYclase, [Score=202, Expect=5e-56]} {Smed: dd_Smed_v6_2998_0_1, dd_Smed_v6_2998_0_1, [Score=166, Expect=1e-43]} {RNA1310_34165} {RNA815_28128} |
| 7. | MligTC455_32117 | 121 | 2.52 | Mlig455_061050 | Neo: - Age: - |
CEBPD | 0.977 | - | - | - | - | - | 0.977 | Mlig455_061050 {REF} {Length: 2187} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=30.6]; bZIP transcription factor [PF00170.23, score=24.3]} {Human: ENSG00000221869, CEBPD, CCAAT enhancer binding protein delta, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000071637, Cebpd, CCAAT/enhancer binding protein (C/EBP), delta, [Score=52.4, Expect=1e-07]} {RNA1509_46169} {RNA1310_36388} {RNA815_32515} |
| 8. | MligTC455_11366 | 258 | 5.38 | Mlig455_016557 | Neo: - Age: - Region-enriched R5: 1.351/0.01677 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_016557 {REF} {Length: 3002} {TRANSSPLICED} {Pfam: Afadin- and alpha -actinin-Binding [PF11559.10, score=54.5]} {Mouse: ENSMUSG00000036825, Ssx2ip, synovial sarcoma, X 2 interacting protein, [RH, Score=92.0, Expect=1e-19]} {RNA1509_10737, RNA1509_37638, RNA1509_45686} {RNA1310_9399, RNA1509_10737, RNA1509_37638, RNA1509_45686} {RNA1509_10737, RNA1509_37638, RNA1509_45686, RNA815_26177} | |
| 9. | MligTC455_32181 | 167 | 3.47 | Mlig455_024277 | Neo: Irradiation Age: logFC(26M/2M)=0.310 |
GTF2H2C_2 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_024277 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Ssl1-like [PF04056.16, score=211.4]; von Willebrand factor type A domain [PF13519.8, score=35.9]; TFIIH C1-like domain [PF07975.14, score=33.0]} {Human: ENSG00000274675, GTF2H2C_2, GTF2H2 family member C, copy 2, [RH, Score=305, Expect=5e-100]; ENSG00000183474, GTF2H2C, GTF2H2 family member C, [RH, Score=305, Expect=5e-100]; ENSG00000276910, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000275045, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000145736, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]} {Mouse: ENSMUSG00000021639, Gtf2h2, general transcription factor II H, polypeptide 2, [RH, Score=306, Expect=9e-101]} {Dmel: FBgn0037202, Ssl1, Suppressor of stem-loop mutation, [RH, Score=328, Expect=8e-109]} {Celegans: WBGene00011814, T16H12.4, General transcription factor IIH subunit 2, [RH, Score=251, Expect=1e-79]} {Smed: dd_Smed_v6_7018_0_1, dd_Smed_v6_7018_0_1, [RH, Score=278, Expect=5e-90]} {RNA1509_19373} {RNA1310_19775, RNA1509_19373} {RNA1509_19373, RNA815_8031} |
| 10. | MligTC455_19134 | 368 | 7.66 | Mlig455_050531 | Neo: - Age: - Region-enriched R5: 1.166/0.02712 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_050531 {REF} {Length: 1504} {RNA1509_14961} {RNA1310_60687} {RNA815_7440.1} | |
| 11. | MligTC455_46333 | 110 | 2.28 | Mlig455_034602 | Neo: Int S/G2/M Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_034602 {REF} {Length: 3558} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4487) [PF14868.8, score=46.0]} {RNA1509_26730} {RNA1310_6072} {RNA815_6677} | |
| 12. | MligTC455_44729 | 137 | 2.84 | Mlig455_036479 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.298 Region-enriched R5: 1.952/0.00788 |
CABIN1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_036479 {REF} {Length: 6283} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=19.2]} {Human: ENSG00000099991, CABIN1, calcineurin binding protein 1, [RH, Score=181, Expect=8e-46]} {Mouse: ENSMUSG00000020196, Cabin1, calcineurin binding protein 1, [RH, Score=180, Expect=1e-45]} {Smed: dd_Smed_v6_8249_0_1, dd_Smed_v6_8249_0_1, [Score=213, Expect=9e-57]} {RNA1509_12600} {RNA1310_3875} {RNA815_16101} |
| 13. | MligTC455_24413 | 231 | 4.8 | Mlig455_033028 | Neo: Int S/G2/M Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_033028 {REF} {Length: 1921} {TRANSSPLICED} {RNA1310_27703} {RNA815_11443} | |
| 14. | MligTC455_14384 | 140 | 2.92 | Mlig455_022933 | Neo: - Age: Down-Up-Up |
PEX11B | 0.956 | - | - | - | - | - | 0.956 | Mlig455_022933 {REF} {Length: 1478} {TRANSSPLICED} {Pfam: Peroxisomal biogenesis factor 11 (PEX11) [PF05648.16, score=147.8]} {Human: ENSG00000131779, PEX11B, peroxisomal biogenesis factor 11 beta, [RH, Score=137, Expect=2e-39]} {Mouse: ENSMUSG00000028102, Pex11b, peroxisomal biogenesis factor 11 beta, [RH, Score=134, Expect=2e-38]} {Dmel: FBgn0034058, Pex11, Peroxin 11, [RH, Score=143, Expect=3e-42]} {Smed: dd_Smed_v6_10309_0_1, dd_Smed_v6_10309_0_1, [RH, Score=77.0, Expect=2e-17]} {RNA1509_37313} {RNA1310_33454} {RNA815_20324.1} |
| 15. | MligTC455_16157 | 57 | 1.19 | Mlig455_000128 | Neo: - Age: - |
0.954 | - | - | 0.954 | - | - | - | Mlig455_000128 {REF} {Length: 733} {RNA1310_66744} {RNA815_64172} | |
| 16. | MligTC455_28079 | 260 | 5.41 | Mlig455_042085 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.353/0.00183 |
TRAM1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_042085 {REF} {Length: 3140} {Pfam: TLC domain [PF03798.18, score=67.5]; TRAM1-like protein [PF08390.13, score=60.2]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [Score=268, Expect=3e-86]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [Score=267, Expect=4e-86]} {Dmel: FBgn0040340, TRAM, [Score=205, Expect=3e-62]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [Score=203, Expect=2e-61]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [Score=358, Expect=6e-122]} {RNA1509_24797} {RNA1310_9998.1, RNA1509_24797} {RNA1509_24797, RNA815_4029.1} |
Berezikov Lab - 2020-2021 © ERIBA