Data search


search
Exact
Search

Results for MligTC455_28079

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28079 260 5.41 Mlig455_042085

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.353/0.00183

TRAM1 Mlig455_042085 {REF} {Length: 3140} {Pfam: TLC domain [PF03798.18, score=67.5]; TRAM1-like protein [PF08390.13, score=60.2]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [Score=268, Expect=3e-86]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [Score=267, Expect=4e-86]} {Dmel: FBgn0040340, TRAM, [Score=205, Expect=3e-62]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [Score=203, Expect=2e-61]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [Score=358, Expect=6e-122]} {RNA1509_24797} {RNA1310_9998.1, RNA1509_24797} {RNA1509_24797, RNA815_4029.1}

Cumulative graph for MligTC455_28079

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.532 2.978 0.03031 0.44598
RegionR2 1.778 2.978 0.05441 0.27936
RegionR3 0.296 2.978 0.72617 1.00000
RegionR4 0.413 2.978 0.64679 0.95039
RegionR5 2.353 2.978 0.00011 0.00183
RegionR6 1.262 2.978 0.14417 0.67935
RegionR7 0.848 2.978 0.43010 1.00000
RegionR8 0.581 2.978 0.62631 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.298 2.978 0.99997 1.00000
RegenerationR2 -0.234 2.978 0.64914 0.93611
RegenerationR3 0.919 2.978 0.14176 0.56779
RegenerationR4 0.317 2.978 0.59033 0.90902
RegenerationR5 -0.645 2.978 0.18238 0.61232
RegenerationR6 -0.216 2.978 0.72552 0.93850
RegenerationBL -0.828 2.978 0.33341 0.70004
RegenerationTP -0.355 2.978 0.69230 1.00000


Genes with expression patterns similar to MligTC455_28079

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28079 260 5.41 Mlig455_042085

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.353/0.00183

TRAM1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_042085 {REF} {Length: 3140} {Pfam: TLC domain [PF03798.18, score=67.5]; TRAM1-like protein [PF08390.13, score=60.2]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [Score=268, Expect=3e-86]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [Score=267, Expect=4e-86]} {Dmel: FBgn0040340, TRAM, [Score=205, Expect=3e-62]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [Score=203, Expect=2e-61]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [Score=358, Expect=6e-122]} {RNA1509_24797} {RNA1310_9998.1, RNA1509_24797} {RNA1509_24797, RNA815_4029.1}
2. MligTC455_22401 1443 30.06 Mlig455_004527, Mlig455_028528

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.957/0.00000

MPV17L2 3.361 0.752 0.749 0.952 - - 0.908

Mlig455_004527 {REF} {Length: 1383} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=48.4]; Cd27 binding protein (Siva) [PF05458.14, score=47.1]} {Human: ENSG00000254858, MPV17L2, MPV17 mitochondrial inner membrane protein like 2, [Score=102, Expect=1e-25]} {Mouse: ENSMUSG00000111476, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=99.0, Expect=1e-24]; ENSMUSG00000035559, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=99.0, Expect=1e-24]} {Dmel: FBgn0030481, CG1662, [Score=112, Expect=3e-29]} {Celegans: WBGene00022744, ZK470.1, [Score=65.1, Expect=1e-12]} {Smed: dd_Smed_v6_8288_0_1, dd_Smed_v6_8288_0_1, [RH, Score=107, Expect=4e-28]} {RNA1509_27940} {RNA1310_31638} {RNA815_14591}

Mlig455_028528 {REF} {Length: 1386} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=48.4]; Cd27 binding protein (Siva) [PF05458.14, score=47.1]} {Human: ENSG00000254858, MPV17L2, MPV17 mitochondrial inner membrane protein like 2, [Score=102, Expect=1e-25]} {Mouse: ENSMUSG00000111476, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=99.0, Expect=1e-24]; ENSMUSG00000035559, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=99.0, Expect=1e-24]} {Dmel: FBgn0030481, CG1662, [Score=112, Expect=3e-29]} {Celegans: WBGene00022744, ZK470.1, [Score=65.1, Expect=1e-12]} {Smed: dd_Smed_v6_8288_0_1, dd_Smed_v6_8288_0_1, [RH, Score=107, Expect=4e-28]} {RNA1509_27940} {RNA1310_31638} {RNA815_14591}
3. MligTC455_19284 101 2.1 Mlig455_019163

Neo: Irradiation

Age: logFC(26M/2M)=0.241

Region-enriched R2: 5.389/0.00432
Region-enriched R5: 3.456/0.00464

2.752 - 0.888 0.973 - - 0.891 Mlig455_019163 {REF} {Length: 4383} {TRANSSPLICED} {RNA1509_7580} {RNA1310_5670, RNA1509_7580} {RNA1509_7580, RNA815_1187.1}
4. MligTC455_21397 386 8.05 Mlig455_052980

Neo: -

Age: -

TAF4 2.545 - - 0.973 0.711 - 0.861 Mlig455_052980 {REF} {Length: 4362} {TRANSSPLICED} {Pfam: Transcription initiation factor TFIID component TAF4 family [PF05236.16, score=129.3]; NHR1 homology to TAF [PF07531.16, score=42.0]} {Human: ENSG00000130699, TAF4, TATA-box binding protein associated factor 4, [RH, Score=144, Expect=1e-35]; ENSG00000280529, TAF4, TATA-box binding protein associated factor 4, [RH, Score=142, Expect=2e-36]} {Mouse: ENSMUSG00000039117, Taf4, TATA-box binding protein associated factor 4, [RH, Score=145, Expect=6e-36]} {Dmel: FBgn0010280, Taf4, TBP-associated factor 4, [Score=110, Expect=7e-25]} {Celegans: WBGene00006385, taf-4, TAF (TBP-associated transcription factor) family, [Score=67.8, Expect=8e-12]} {Smed: dd_Smed_v6_9560_0_1, dd_Smed_v6_9560_0_1, [Score=87.8, Expect=2e-18]} {RNA1509_12245, RNA1509_33838, RNA1509_55665} {RNA1310_5227, RNA1509_12245, RNA1509_33838, RNA1509_55665} {RNA1509_12245, RNA1509_33838, RNA1509_55665, RNA815_18740}
5. MligTC455_09060 276 5.75 Mlig455_009276

Neo: -

Age: -

Region-enriched R5: 1.044/0.04246

ERCC3 2.483 0.742 0.783 0.958 - - - Mlig455_009276 {REF} {Length: 4027} {TRANSSPLICED} {Pfam: ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=389.1]; Helicase conserved C-terminal domain [PF13625.8, score=116.7]; Type III restriction enzyme, res subunit [PF04851.17, score=62.2]; Helicase conserved C-terminal domain [PF00271.33, score=39.5]; SNF2-related domain [PF00176.25, score=25.2]; P-loop containing NTP hydrolase pore-1 [PF13872.8, score=19.2]} {Human: ENSG00000163161, ERCC3, ERCC excision repair 3, TFIIH core complex helicase subunit, [RH, Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024382, Ercc3, excision repair cross-complementing rodent repair deficiency, complementation group 3, [RH, Score=1018, Expect=0.0]} {Dmel: FBgn0001179, hay, haywire, [RH, Score=994, Expect=0.0]} {Celegans: WBGene00013441, xpb-1, XPB (Xeroderma Pigmentosum complementation group B) related, [RH, Score=930, Expect=0.0]} {Smed: dd_Smed_v6_9996_0_1, dd_Smed_v6_9996_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_12216} {RNA1310_7003} {RNA815_3026.1}
6. MligTC455_23481 281 5.85 Mlig455_008434, Mlig455_071066

Neo: Irradiation

Age: -

1.839 - - 0.953 - - 0.886

Mlig455_008434 {REF} {Length: 2482} {TRANSSPLICED} {RNA1509_25161} {RNA1310_13086.3} {RNA815_8320}

Mlig455_071066 {REF} {Length: 2287} {TRANSSPLICED} {RNA1509_25161} {RNA1310_13086.3} {RNA815_8320}
7. MligTC455_21396 337 7.03 Mlig455_036844

Neo: -

Age: Down-Up-Up

TAF4 1.814 - - 0.971 - - 0.843 Mlig455_036844 {REF} {Length: 3934} {TRANSSPLICED} {Pfam: Transcription initiation factor TFIID component TAF4 family [PF05236.16, score=129.4]; NHR1 homology to TAF [PF07531.16, score=41.8]} {Human: ENSG00000130699, TAF4, TATA-box binding protein associated factor 4, [RH, Score=143, Expect=2e-35]; ENSG00000141384, TAF4B, TATA-box binding protein associated factor 4b, [RH, Score=142, Expect=4e-35]; ENSG00000280529, TAF4, TATA-box binding protein associated factor 4, [RH, Score=142, Expect=2e-36]} {Mouse: ENSMUSG00000039117, Taf4, TATA-box binding protein associated factor 4, [RH, Score=144, Expect=1e-35]} {Dmel: FBgn0010280, Taf4, TBP-associated factor 4, [RH, Score=111, Expect=4e-25]} {Celegans: WBGene00006385, taf-4, TAF (TBP-associated transcription factor) family, [RH, Score=67.8, Expect=9e-12]} {Smed: dd_Smed_v6_9560_0_1, dd_Smed_v6_9560_0_1, [RH, Score=90.1, Expect=5e-19]} {RNA1509_12245} {RNA1310_5227} {RNA815_18740}
8. MligTC455_34291 254 5.29 Mlig455_028897

Neo: Irradiation

Age: logFC(26M/2M)=0.396

Region-enriched R5: 1.944/0.00597

1.807 - - 0.966 - - 0.841 Mlig455_028897 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=41.4]} {RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1310_13030, RNA1509_26437, RNA1509_34546, RNA1509_40238} {RNA1509_26437, RNA1509_34546, RNA1509_40238, RNA815_6218}
9. MligTC455_11715 52 1.08 Mlig455_012409

Neo: -

Age: -

GRM3 1.8 - - 0.959 - - 0.841 Mlig455_012409 {REF} {Length: 3624} {Pfam: Receptor family ligand binding region [PF01094.30, score=212.0]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=194.1]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=32.7]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=676, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=560, Expect=0.0]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=745, Expect=0.0]} {RNA1509_46373} {RNA1310_21236} {RNA815_19897}
10. MligTC455_49283 671 13.99 Mlig455_001528, Mlig455_046576

Neo: Int S/G2/M

Age: -

Region-enriched R2: 1.859/0.02944

MMACHC 1.755 - - 0.959 0.796 - -

Mlig455_001528 {REF} {Length: 1838} {TRANSSPLICED} {Pfam: Methylmalonic aciduria and homocystinuria type C family [PF16690.7, score=156.7]} {Human: ENSG00000132763, MMACHC, methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, [RH, Score=130, Expect=1e-35]} {Mouse: ENSMUSG00000028690, Mmachc, methylmalonic aciduria cblC type, with homocystinuria, [RH, Score=130, Expect=4e-36]} {Smed: dd_Smed_v6_8584_0_1, dd_Smed_v6_8584_0_1, [RH, Score=114, Expect=3e-30]} {RNA1509_29990, RNA1509_42294} {RNA1310_36622, RNA1509_29990, RNA1509_42294} {RNA1509_29990, RNA1509_42294, RNA815_18456}

Mlig455_046576 {REF} {Length: 1840} {TRANSSPLICED} {Pfam: Methylmalonic aciduria and homocystinuria type C family [PF16690.7, score=157.4]} {Human: ENSG00000132763, MMACHC, methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, [RH, Score=132, Expect=2e-36]} {Mouse: ENSMUSG00000028690, Mmachc, methylmalonic aciduria cblC type, with homocystinuria, [RH, Score=132, Expect=6e-37]} {Smed: dd_Smed_v6_8584_0_1, dd_Smed_v6_8584_0_1, [RH, Score=114, Expect=6e-30]} {RNA1509_29990, RNA1509_35509, RNA1509_39634} {RNA1310_36622, RNA1509_35509, RNA1509_39634} {RNA1509_35509, RNA1509_39634, RNA815_18456}
11. MligTC455_53254 432 8.99 Mlig455_014867

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 2.224/0.00000

MAD2L1 1.738 - - 0.960 - - 0.778 Mlig455_014867 {REF} {Length: 1995} {Pfam: HORMA domain [PF02301.20, score=81.0]; Autophagy-related protein 13 [PF10033.11, score=19.9]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [RH, Score=230, Expect=7e-77]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [RH, Score=227, Expect=9e-76]} {Dmel: FBgn0035640, mad2, [RH, Score=187, Expect=4e-60]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [RH, Score=203, Expect=1e-66]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365}
12. MligTC455_21238 129 2.69 Mlig455_005974

Neo: -

Age: -

Region-enriched R5: 1.628/0.01619

0.972 - - 0.972 - - - Mlig455_005974 {REF} {Length: 382} {NoTransDecoderORF} {RNA1509_57525} {RNA1310_118595} {RNA815_10590.1}
13. MligTC455_32117 121 2.52 Mlig455_061050

Neo: -

Age: -

CEBPD 0.966 - - - - - 0.966 Mlig455_061050 {REF} {Length: 2187} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=30.6]; bZIP transcription factor [PF00170.23, score=24.3]} {Human: ENSG00000221869, CEBPD, CCAAT enhancer binding protein delta, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000071637, Cebpd, CCAAT/enhancer binding protein (C/EBP), delta, [Score=52.4, Expect=1e-07]} {RNA1509_46169} {RNA1310_36388} {RNA815_32515}
14. MligTC455_30363 240 5 Mlig455_011101

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.846

0.965 - - - - - 0.965 Mlig455_011101 {REF} {Length: 2013} {NoTransDecoderORF} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
15. MligTC455_13397 328 6.83 Mlig455_005290

Neo: -

Age: -

Region-enriched R5: 1.444/0.00333

EXTL3 0.964 - - 0.964 - - - Mlig455_005290 {REF} {Length: 4329} {TRANSSPLICED} {Pfam: Glycosyl transferase family 64 domain [PF09258.12, score=287.7]; Exostosin family [PF03016.17, score=37.3]} {Human: ENSG00000012232, EXTL3, exostosin like glycosyltransferase 3, [RH, Score=481, Expect=4e-156]} {Mouse: ENSMUSG00000021978, Extl3, exostoses (multiple)-like 3, [RH, Score=478, Expect=4e-155]} {Dmel: FBgn0027535, botv, brother of tout-velu, [RH, Score=479, Expect=9e-155]} {Celegans: WBGene00004361, rib-2, Exostosin-2 homolog, [RH, Score=399, Expect=5e-126]} {Smed: dd_Smed_v6_14625_0_1, dd_Smed_v6_14625_0_1, [RH, Score=441, Expect=4e-142]} {RNA1509_24376} {RNA1310_18189, RNA1509_24376} {RNA1509_24376, RNA815_24950}
16. MligTC455_46826 219 4.57 Mlig455_070116

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.531

0.963 - - 0.963 - - - Mlig455_070116 {REF} {Length: 3016} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=22.7]} {RNA1509_45084} {RNA1310_18153, RNA1509_45084} {RNA1509_45084, RNA815_2804}
17. MligTC455_51925 253 5.27 Mlig455_009245

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.320/0.02123

UGCG 0.962 - - - - - 0.962 Mlig455_009245 {REF} {Length: 3283} {Pfam: Glycosyl transferase family 21 [PF13506.8, score=148.2]; Glycosyltransferase like family 2 [PF13641.8, score=73.9]; Glycosyl transferase family group 2 [PF13632.8, score=41.9]} {Human: ENSG00000148154, UGCG, UDP-glucose ceramide glucosyltransferase, [Score=301, Expect=5e-99]} {Mouse: ENSMUSG00000028381, Ugcg, UDP-glucose ceramide glucosyltransferase, [Score=306, Expect=4e-101]} {Dmel: FBgn0067102, GlcT-1, Ceramide glucosyltransferase, [Score=317, Expect=1e-104]} {Celegans: WBGene00019127, cgt-3, Ceramide glucosyltransferase 3, [RH, Score=293, Expect=4e-95]} {Smed: dd_Smed_v6_2757_0_1, dd_Smed_v6_2757_0_1, [RH, Score=291, Expect=1e-94]} {RNA1509_16764, RNA1509_43390} {RNA1310_8682.2, RNA1509_16764, RNA1509_43390} {RNA1509_16764, RNA1509_43390, RNA815_2800}
18. MligTC455_05800 191 3.97 Mlig455_025866

Neo: -

Age: -

0.96 - - 0.960 - - - Mlig455_025866 {REF} {Length: 415} {NoTransDecoderORF} {RNA1509_60125} {RNA1310_87611} {RNA815_50728}
19. MligTC455_47042 396 8.25 Mlig455_033600, Mlig455_033705

Neo: Neoblast, stringent

Age: -

ORC5 0.958 - - 0.958 - - -

Mlig455_033600 {REF} {Length: 1452} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=33.2]} {RNA1310_72659} {RNA815_35692.2}

Mlig455_033705 {REF} {Length: 2942} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=81.6]; AAA ATPase domain [PF13191.8, score=40.1]; AAA domain [PF13401.8, score=22.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.2]} {Human: ENSG00000164815, ORC5, origin recognition complex subunit 5, [RH, Score=74.7, Expect=5e-14]} {Dmel: FBgn0015271, Orc5, Origin recognition complex subunit 5, [Score=66.2, Expect=2e-11]} {RNA1310_42091} {RNA815_35692.1}
20. MligTC455_25043 838 17.45 Mlig455_025756, Mlig455_064378, Mlig455_064405

Neo: -

Age: -

Region-enriched R4: 1.713/0.04997

SLCO5A1 0.957 - - - - - 0.957

Mlig455_025756 {REF} {Length: 4885} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=261.2]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=205, Expect=1e-54]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=222, Expect=1e-60]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [Score=213, Expect=8e-57]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=121, Expect=5e-28]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=148, Expect=8e-37]} {RNA1509_42276} {RNA1310_3704} {RNA815_11526}

Mlig455_064378 {REF} {Length: 5250} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=411.2]; Major Facilitator Superfamily [PF07690.18, score=53.9]; Kazal-type serine protease inhibitor domain [PF07648.17, score=20.6]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=320, Expect=1e-94]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=336, Expect=9e-101]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [RH, Score=327, Expect=3e-95]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=233, Expect=2e-64]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=243, Expect=3e-68]} {RNA1509_22001, RNA1509_32188} {RNA1310_3704, RNA1509_22001, RNA1509_32188} {RNA1509_22001, RNA1509_32188, RNA815_11526}

Mlig455_064405 {REF} {Length: 5262} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=410.9]; Major Facilitator Superfamily [PF07690.18, score=52.9]; Kazal-type serine protease inhibitor domain [PF07648.17, score=20.6]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=320, Expect=1e-94]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=336, Expect=8e-101]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [RH, Score=327, Expect=2e-95]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=233, Expect=3e-64]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=243, Expect=3e-68]} {RNA1509_22001, RNA1509_41344, RNA1509_42276} {RNA1310_3704, RNA1509_41344, RNA1509_42276} {RNA1509_41344, RNA1509_42276, RNA815_11526}
21. MligTC455_49547 336 7 Mlig455_028613, Mlig455_028636

Neo: -

Age: -

Region-enriched R5: 2.009/0.00823

NR1D2 0.957 - - 0.957 - - -

Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1}

Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}
22. MligTC455_05801 486 10.13 Mlig455_025927, Mlig455_025958

Neo: -

Age: -

SMAD4 0.955 - - 0.955 - - -

Mlig455_025927 {REF} {Length: 3700} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=164.8]; MH1 domain [PF03165.18, score=138.8]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=454, Expect=2e-154]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=454, Expect=2e-154]} {Dmel: FBgn0011655, Med, Medea, [Score=252, Expect=4e-75]} {Celegans: WBGene00004856, sma-2, Dwarfin sma-2, [Score=194, Expect=6e-56]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=279, Expect=3e-86]} {RNA1509_13735} {RNA1310_3918} {RNA815_8361}

Mlig455_025958 {REF} {Length: 3728} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=217.5]; MH1 domain [PF03165.18, score=138.7]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [RH, Score=507, Expect=1e-174]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [RH, Score=506, Expect=1e-174]} {Dmel: FBgn0011655, Med, Medea, [RH, Score=298, Expect=5e-92]} {Celegans: WBGene00004856, sma-2, Dwarfin sma-2, [Score=218, Expect=7e-65]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [RH, Score=330, Expect=1e-105]} {RNA1509_13735} {RNA1310_3918} {RNA815_8361}
23. MligTC455_30364 252 5.25 Mlig455_058073

Neo: -

Age: logFC(26M/2M)=0.482

0.955 - - - - - 0.955 Mlig455_058073 {REF} {Length: 3291} {TRANSSPLICED} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
24. MligTC455_13396 351 7.3 Mlig455_004986

Neo: -

Age: -

Region-enriched R5: 1.511/0.00084

0.954 - - 0.954 - - - Mlig455_004986 {REF} {Length: 799} {NoTransDecoderORF} {RNA1509_31555, RNA1509_50636} {RNA1310_44877, RNA1509_31555} {RNA1509_31555, RNA815_24950}
25. MligTC455_23918 278 5.79 Mlig455_030499

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_030499 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=49.1]; Methyltransferase domain [PF08241.14, score=46.1]; Methyltransferase domain [PF08242.14, score=29.7]; Methyltransferase domain [PF13847.8, score=28.6]; Methyltransferase domain [PF13489.8, score=24.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_45705}
26. MligTC455_51550 460 9.59 Mlig455_039217, Mlig455_053903

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.915

Region-enriched R2: 2.333/0.04047

0.953 - - 0.953 - - -

Mlig455_039217 {REF} {Length: 1773} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1, RNA1509_28709} {RNA1509_28709, RNA815_36053}

Mlig455_053903 {REF} {Length: 1761} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1} {RNA815_36053}
27. MligTC455_14080 1422 29.63 Mlig455_014180, Mlig455_062760

Neo: -

Age: -

TUSC3 0.951 - - 0.951 - - -

Mlig455_014180 {REF} {Length: 2562} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=253.6]; Mitochondrial carrier protein [PF00153.29, score=183.3]} {Human: ENSG00000104723, TUSC3, tumor suppressor candidate 3, [RH, Score=302, Expect=5e-99]} {Mouse: ENSMUSG00000039530, Tusc3, tumor suppressor candidate 3, [Score=305, Expect=2e-99]; ENSMUSG00000031232, Magt1, magnesium transporter 1, [Score=295, Expect=3e-96]} {Dmel: FBgn0030218, CG1628, [RH, Score=315, Expect=6e-102]} {Celegans: WBGene00020422, T10F2.2, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_2352_0_1, dd_Smed_v6_2352_0_1, [Score=333, Expect=3e-111]} {RNA1509_16762, RNA1509_30199} {RNA1310_11980.2, RNA1509_30199} {RNA1509_30199, RNA815_5939}

Mlig455_062760 {REF} {Length: 2589} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=253.6]; Mitochondrial carrier protein [PF00153.29, score=183.3]} {Human: ENSG00000104723, TUSC3, tumor suppressor candidate 3, [RH, Score=302, Expect=5e-99]} {Mouse: ENSMUSG00000039530, Tusc3, tumor suppressor candidate 3, [Score=305, Expect=2e-99]; ENSMUSG00000031232, Magt1, magnesium transporter 1, [Score=295, Expect=3e-96]} {Dmel: FBgn0030218, CG1628, [RH, Score=315, Expect=6e-102]} {Celegans: WBGene00020422, T10F2.2, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_2352_0_1, dd_Smed_v6_2352_0_1, [Score=333, Expect=3e-111]} {RNA1509_16762} {RNA1310_11980.2} {RNA815_5939}
28. MligTC455_44821 96 2 Mlig455_036034

Neo: -

Age: Down-Down-Down

0.951 - - - - - 0.951 Mlig455_036034 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=405.0]; Sulfotransferase family [PF13469.8, score=48.5]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=165, Expect=9e-48]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006}
29. MligTC455_46769 561 11.69 Mlig455_016191

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.380

FAM76A 0.951 - - 0.951 - - - Mlig455_016191 {REF} {Length: 3032} {TRANSSPLICED} {Pfam: FAM76 protein [PF16046.7, score=150.4]} {Human: ENSG00000009780, FAM76A, family with sequence similarity 76 member A, [RH, Score=104, Expect=1e-24]} {Mouse: ENSMUSG00000037808, Fam76b, family with sequence similarity 76, member B, [RH, Score=108, Expect=6e-26]; ENSMUSG00000028878, Fam76a, family with sequence similarity 76, member A, [RH, Score=103, Expect=3e-24]} {Celegans: WBGene00019399, K04F10.7, [RH, Score=53.9, Expect=6e-08]} {Smed: dd_Smed_v6_6213_0_1, dd_Smed_v6_6213_0_1, [RH, Score=134, Expect=2e-35]} {RNA1509_24429, RNA1509_52669, RNA1509_54090} {RNA1310_21568.1, RNA1509_24429, RNA1509_52669, RNA1509_54090} {RNA1509_24429, RNA1509_52669, RNA1509_54090, RNA815_22662.1}
30. MligTC455_11083 26 0.55 Mlig455_020419

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_020419 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: NHR1 homology to TAF [PF07531.16, score=20.1]} {RNA1509_32661} {RNA1310_23242.1, RNA1509_32661} {RNA1509_32661, RNA815_35817}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA