TomoSeq data search

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Results for MligTC455_44839

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44839

3431

71.48

Mlig455_006192, Mlig455_065220

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.453

NME5

Mlig455_006192 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_27238} {RNA1310_30067} {RNA815_13442.1}

Mlig455_065220 {REF} {Length: 1202} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_21330, RNA1509_27238} {RNA1310_30067, RNA1509_21330, RNA1509_27238} {RNA1509_21330, RNA1509_27238, RNA815_13442.1}

Cumulative graph for MligTC455_44839

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.132	6.21	0.06356	0.57339
RegionR2	0.367	6.21	0.31534	0.70647
RegionR3	0.623	6.21	0.04128	0.35443
RegionR4	0.492	6.21	0.16305	0.42228
RegionR5	0.403	6.21	0.18383	0.46315
RegionR6	0.358	6.21	0.26022	0.84794
RegionR7	0.04	6.21	0.90794	1.00000
RegionR8	-1.15	6.21	0.00875	0.17458

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.725	6.21	0.37987	1.00000
RegenerationR2	0.21	6.21	0.57725	0.90562
RegenerationR3	-0.011	6.21	0.97692	1.00000
RegenerationR4	0.031	6.21	0.93722	1.00000
RegenerationR5	-0.079	6.21	0.83788	1.00000
RegenerationR6	-0.388	6.21	0.32484	0.67078
RegenerationBL	-0.037	6.21	0.92159	1.00000
RegenerationTP	0.022	6.21	0.95774	1.00000

Genes with expression patterns similar to MligTC455_44839

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44839	3431	71.48	Mlig455_006192, Mlig455_065220	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.453	NME5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006192 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_27238} {RNA1310_30067} {RNA815_13442.1} Mlig455_065220 {REF} {Length: 1202} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_21330, RNA1509_27238} {RNA1310_30067, RNA1509_21330, RNA1509_27238} {RNA1509_21330, RNA1509_27238, RNA815_13442.1}
2.	MligTC455_28447	1671	34.81	Mlig455_066308	Neo: - Age: Down-Up-Down		2.7	-	0.857	-	-	0.952	0.891	Mlig455_066308 {REF} {Length: 1281} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=104.5]} {Mouse: ENSMUSG00000098176, Ccdc166, coiled-coil domain containing 166, [RH, Score=107, Expect=4e-26]} {Smed: dd_Smed_v6_13384_0_1, dd_Smed_v6_13384_0_1, [RH, Score=124, Expect=2e-33]} {RNA1509_33127} {RNA1310_32791.1, RNA1509_33127} {RNA1509_33127, RNA815_15652}
3.	MligTC455_42032	2450	51.05	Mlig455_000957	Neo: - Age: - Region-enriched R4: 1.015/0.01038	CETN1	1.697	-	-	0.737	-	0.960	-	Mlig455_000957 {REF} {Length: 941} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=104.7]; EF-hand domain pair [PF13499.8, score=98.2]; EF-hand domain [PF13405.8, score=82.0]; EF-hand domain pair [PF13833.8, score=71.1]; EF-hand domain [PF14658.8, score=61.8]; EF hand [PF13202.8, score=36.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.1]; EF-hand domain [PF17959.3, score=20.6]} {Human: ENSG00000177143, CETN1, centrin 1, [RH, Score=266, Expect=3e-92]; ENSG00000147400, CETN2, centrin 2, [RH, Score=259, Expect=2e-89]} {Mouse: ENSMUSG00000031347, Cetn2, centrin 2, [RH, Score=261, Expect=2e-90]; ENSMUSG00000050996, Cetn1, centrin 1, [RH, Score=257, Expect=1e-88]} {Dmel: FBgn0040010, CG17493, [RH, Score=238, Expect=3e-81]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=6e-46]} {Smed: dd_Smed_v6_3644_0_1, dd_Smed_v6_3644_0_1, [RH, Score=261, Expect=1e-90]} {RNA1509_20415, RNA1509_32004} {RNA1310_37828, RNA1509_32004} {RNA1509_32004, RNA815_17729}
4.	MligTC455_49806	1837	38.28	Mlig455_014409	Neo: - Age: -	RAC3	0.969	-	-	-	-	-	0.969	Mlig455_014409 {REF} {Length: 1644} {Pfam: Ras family [PF00071.24, score=146.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.3]; ADP-ribosylation factor family [PF00025.23, score=44.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.5]} {Human: ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=140, Expect=2e-41]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=138, Expect=5e-41]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=137, Expect=1e-40]; ENSG00000070831, CDC42, cell division cycle 42, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=135, Expect=2e-39]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=135, Expect=1e-39]} {Mouse: ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=140, Expect=1e-41]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=138, Expect=3e-41]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=137, Expect=9e-41]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=134, Expect=2e-39]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=138, Expect=4e-41]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=145, Expect=6e-44]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=138, Expect=2e-41]} {RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1310_34688.1, RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1509_14417, RNA1509_15579, RNA1509_32277, RNA815_20638}
5.	MligTC455_25220	5921	123.36	Mlig455_036735	Neo: - Age: -	NME8	0.965	-	-	-	-	-	0.965	Mlig455_036735 {REF} {Length: 2994} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=360.7]; Thioredoxin [PF00085.22, score=40.7]} {Human: ENSG00000086288, NME8, NME/NM23 family member 8, [RH, Score=331, Expect=1e-102]} {Mouse: ENSMUSG00000041138, Nme8, NME/NM23 family member 8, [RH, Score=310, Expect=5e-95]} {Dmel: FBgn0030359, CG18130, [RH, Score=97.1, Expect=2e-20]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=77.0, Expect=3e-16]} {Smed: dd_Smed_v6_8401_0_1, dd_Smed_v6_8401_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_1203} {RNA1310_11078.1} {RNA815_3861}
6.	MligTC455_42370	1918	39.97	Mlig455_064104	Neo: - Age: logFC(26M/2M)=-0.367	CAV1	0.962	-	-	-	-	0.962	-	Mlig455_064104 {REF} {Length: 2616} {Pfam: Caveolin [PF01146.19, score=143.1]} {Human: ENSG00000105974, CAV1, caveolin 1, [RH, Score=117, Expect=4e-31]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [RH, Score=122, Expect=4e-33]} {Celegans: WBGene00000302, cav-2, Caveolin-2, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_6535_0_2, dd_Smed_v6_6535_0_2, [Score=91.7, Expect=2e-22]} {RNA1509_42761} {RNA1310_10782.2} {RNA815_16688.1}
7.	MligTC455_41335	1269	26.43	Mlig455_045582, Mlig455_045640	Neo: - Age: logFC(26M/2M)=-0.523 Region-enriched R7: 1.107/0.03955		0.957	-	-	-	-	0.957	-	Mlig455_045582 {REF} {Length: 3532} {Pfam: Otopetrin [PF03189.15, score=221.5]} {Dmel: FBgn0259150, CG42265, [Score=162, Expect=1e-40]} {Celegans: WBGene00010403, otpl-8, OToPetrin-Like, [RH, Score=130, Expect=3e-31]} {Smed: dd_Smed_v6_13612_0_2, dd_Smed_v6_13612_0_2, [Score=158, Expect=1e-40]} {RNA1509_10848, RNA1509_23325, RNA1509_44866} {RNA1310_4404.1, RNA1509_10848, RNA1509_23325, RNA1509_44866} {RNA1509_10848, RNA1509_23325, RNA1509_44866, RNA815_2597.1} Mlig455_045640 {REF} {Length: 2553} {Pfam: Otopetrin [PF03189.15, score=223.8]} {Dmel: FBgn0259150, CG42265, [Score=160, Expect=6e-41]} {Celegans: WBGene00010403, otpl-8, OToPetrin-Like, [RH, Score=130, Expect=1e-31]} {Smed: dd_Smed_v6_12986_0_1, dd_Smed_v6_12986_0_1, [Score=158, Expect=3e-41]} {RNA1509_23325} {RNA1310_4404.1} {RNA815_2597.1}
8.	MligTC455_47804	2485	51.77	Mlig455_042589, Mlig455_042632	Neo: - Age: - Region-enriched R4: 1.074/0.01939	SMKR1	0.953	-	-	-	-	-	0.953	Mlig455_042589 {REF} {Length: 1673} {TRANSSPLICED} {Human: ENSG00000240204, SMKR1, small lysine rich protein 1, [RH, Score=53.5, Expect=1e-10]} {Dmel: FBgn0266615, CG45122, [RH, Score=41.2, Expect=6e-06]} {Smed: dd_Smed_v6_10158_0_1, dd_Smed_v6_10158_0_1, [RH, Score=43.9, Expect=4e-07]} {RNA1509_38498, RNA1509_57310} {RNA1310_41265, RNA1509_38498, RNA1509_57310} {RNA1509_38498, RNA1509_57310, RNA815_11227.2} Mlig455_042632 {REF} {Length: 1583} {TRANSSPLICED} {Human: ENSG00000240204, SMKR1, small lysine rich protein 1, [RH, Score=54.3, Expect=5e-11]} {Dmel: FBgn0266615, CG45122, [Score=41.6, Expect=5e-06]} {Smed: dd_Smed_v6_10158_0_1, dd_Smed_v6_10158_0_1, [RH, Score=43.9, Expect=3e-07]} {RNA1509_11980, RNA1509_26819} {RNA1310_52333, RNA1509_11980, RNA1509_26819} {RNA1509_11980, RNA1509_26819, RNA815_11227.1}

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