Data search
Results for MligTC455_42370
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42370 | 1918 | 39.97 | Mlig455_064104 | Neo: - Age: logFC(26M/2M)=-0.367 |
CAV1 | Mlig455_064104 {REF} {Length: 2616} {Pfam: Caveolin [PF01146.19, score=143.1]} {Human: ENSG00000105974, CAV1, caveolin 1, [RH, Score=117, Expect=4e-31]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [RH, Score=122, Expect=4e-33]} {Celegans: WBGene00000302, cav-2, Caveolin-2, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_6535_0_2, dd_Smed_v6_6535_0_2, [Score=91.7, Expect=2e-22]} {RNA1509_42761} {RNA1310_10782.2} {RNA815_16688.1} |
Cumulative graph for MligTC455_42370
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.097 | 5.52 | 0.12307 | 0.71700 | |
| RegionR2 | 0.323 | 5.52 | 0.36941 | 0.76414 | |
| RegionR3 | 0.399 | 5.52 | 0.18405 | 0.71738 | |
| RegionR4 | -0.101 | 5.52 | 0.78360 | 1.00000 | |
| RegionR5 | -0.466 | 5.52 | 0.13056 | 0.36718 | |
| RegionR6 | 0.377 | 5.52 | 0.22009 | 0.79979 | |
| RegionR7 | -0.07 | 5.52 | 0.84473 | 1.00000 | |
| RegionR8 | 0.634 | 5.52 | 0.08593 | 0.55534 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.269 | 5.52 | 0.10928 | 0.83267 | |
| RegenerationR2 | -0.256 | 5.52 | 0.47277 | 0.85874 | |
| RegenerationR3 | -0.338 | 5.52 | 0.36888 | 0.78330 | |
| RegenerationR4 | -0.376 | 5.52 | 0.34005 | 0.77158 | |
| RegenerationR5 | 0.129 | 5.52 | 0.73630 | 0.96672 | |
| RegenerationR6 | -0.816 | 5.52 | 0.03251 | 0.22545 | |
| RegenerationBL | -0.925 | 5.52 | 0.01756 | 0.14164 | |
| RegenerationTP | -0.084 | 5.52 | 0.82942 | 1.00000 |
Genes with expression patterns similar to MligTC455_42370
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42370 | 1918 | 39.97 | Mlig455_064104 | Neo: - Age: logFC(26M/2M)=-0.367 |
CAV1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064104 {REF} {Length: 2616} {Pfam: Caveolin [PF01146.19, score=143.1]} {Human: ENSG00000105974, CAV1, caveolin 1, [RH, Score=117, Expect=4e-31]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [RH, Score=122, Expect=4e-33]} {Celegans: WBGene00000302, cav-2, Caveolin-2, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_6535_0_2, dd_Smed_v6_6535_0_2, [Score=91.7, Expect=2e-22]} {RNA1509_42761} {RNA1310_10782.2} {RNA815_16688.1} |
| 2. | MligTC455_53045 | 1316 | 27.42 | Mlig455_026988 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.692/0.00217 |
DYNLL1 | 1.757 | - | - | - | - | 0.803 | 0.954 | Mlig455_026988 {REF} {Length: 830} {Pfam: Dynein light chain type 1 [PF01221.20, score=67.9]; EF hand [PF00036.34, score=47.4]; EF-hand domain pair [PF13499.8, score=44.1]; EF-hand domain [PF13405.8, score=36.6]; EF hand [PF13202.8, score=35.1]; EF-hand domain pair [PF13833.8, score=29.2]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=18.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=51.2, Expect=2e-08]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=49.3, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=51.2, Expect=1e-08]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=49.3, Expect=8e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=49.7, Expect=4e-08]} {Celegans: WBGene00043067, dlc-5, Dynein Light Chain, [Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [RH, Score=134, Expect=6e-40]} {RNA1509_3612} {RNA1310_33488} {RNA815_4208} |
| 3. | MligTC455_27839 | 307 | 6.4 | Mlig455_007792 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} | |
| 4. | MligTC455_44839 | 3431 | 71.48 | Mlig455_006192, Mlig455_065220 | Neo: - |
NME5 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_006192 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_27238} {RNA1310_30067} {RNA815_13442.1} Mlig455_065220 {REF} {Length: 1202} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=148.8]; Dpy-30 motif [PF05186.15, score=62.6]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=291, Expect=1e-100]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=281, Expect=1e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=117, Expect=3e-33]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.7, Expect=8e-19]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=294, Expect=2e-102]} {RNA1509_21330, RNA1509_27238} {RNA1310_30067, RNA1509_21330, RNA1509_27238} {RNA1509_21330, RNA1509_27238, RNA815_13442.1} |
| 5. | MligTC455_27841 | 1118 | 23.3 | Mlig455_021442, Mlig455_037900 | Neo: - Age: - Regeneration-upregulated BL: 4.099 Regeneration-enriched BL: 4.099 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} |
|
| 6. | MligTC455_31262 | 152 | 3.17 | Mlig455_016452 | Neo: - Age: logFC(26M/2M)=0.430 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_016452 {REF} {Length: 1772} {TRANSSPLICED} {RNA1509_31542, RNA1509_36611} {RNA1310_39708.1, RNA1509_36611} {RNA1509_36611, RNA815_14082} | |
| 7. | MligTC455_27842 | 1017 | 21.19 | Mlig455_021051, Mlig455_052351 | Neo: - Age: Down-Down-Up Regeneration-enriched TP: 4.635 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_021051 {REF} {Length: 11271} {Pfam: Zinc knuckle [PF00098.25, score=18.6]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_052351 {REF} {Length: 9553} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} |
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