Data search


search
Exact
Search

Results for MligTC455_44982

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44982 463 9.65 Mlig455_038584

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.496

LZIC Mlig455_038584 {REF} {Length: 2359} {TRANSSPLICED} {Pfam: Beta-catenin-interacting protein ICAT [PF06384.13, score=67.5]; AefR-like transcriptional repressor, C-terminal domain [PF14246.8, score=18.8]} {Human: ENSG00000162441, LZIC, leucine zipper and CTNNBIP1 domain containing, [RH, Score=190, Expect=5e-61]} {Mouse: ENSMUSG00000028990, Lzic, leucine zipper and CTNNBIP1 domain containing, [RH, Score=190, Expect=3e-61]} {Celegans: WBGene00022885, ZK1248.19, [RH, Score=107, Expect=2e-29]} {RNA1509_8229} {RNA1310_42784, RNA1509_8229} {RNA1509_8229, RNA815_19558}

Cumulative graph for MligTC455_44982

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.351 3.626 0.73889 1.00000
RegionR2 0.694 3.626 0.25210 0.63139
RegionR3 1.172 3.626 0.00361 0.07677
RegionR4 0.396 3.626 0.43833 0.76714
RegionR5 -0.01 3.626 0.98844 1.00000
RegionR6 -0.038 3.626 0.94577 1.00000
RegionR7 0.725 3.626 0.17537 0.76877
RegionR8 -2.589 3.626 0.01845 0.26358

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.165 3.626 0.94207 1.00000
RegenerationR2 -0.198 3.626 0.72470 0.96383
RegenerationR3 1.206 3.626 0.01370 0.21470
RegenerationR4 0.971 3.626 0.05318 0.37060
RegenerationR5 1.517 3.626 0.00092 0.05038
RegenerationR6 1.576 3.626 0.00588 0.09294
RegenerationBL 1.565 3.626 0.07346 0.31621
RegenerationTP 2.289 3.626 0.00596 0.12981


Genes with expression patterns similar to MligTC455_44982

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44982 463 9.65 Mlig455_038584

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.496

LZIC 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038584 {REF} {Length: 2359} {TRANSSPLICED} {Pfam: Beta-catenin-interacting protein ICAT [PF06384.13, score=67.5]; AefR-like transcriptional repressor, C-terminal domain [PF14246.8, score=18.8]} {Human: ENSG00000162441, LZIC, leucine zipper and CTNNBIP1 domain containing, [RH, Score=190, Expect=5e-61]} {Mouse: ENSMUSG00000028990, Lzic, leucine zipper and CTNNBIP1 domain containing, [RH, Score=190, Expect=3e-61]} {Celegans: WBGene00022885, ZK1248.19, [RH, Score=107, Expect=2e-29]} {RNA1509_8229} {RNA1310_42784, RNA1509_8229} {RNA1509_8229, RNA815_19558}
2. MligTC455_44981 565 11.76 Mlig455_038443

Neo: Int S/G2/M

Age: -

Region-enriched R3: 1.137/0.04347

LZIC 2.564 - 0.950 - - 0.808 0.806 Mlig455_038443 {REF} {Length: 2241} {TRANSSPLICED} {Pfam: Beta-catenin-interacting protein ICAT [PF06384.13, score=67.0]; AefR-like transcriptional repressor, C-terminal domain [PF14246.8, score=18.8]} {Human: ENSG00000162441, LZIC, leucine zipper and CTNNBIP1 domain containing, [RH, Score=191, Expect=3e-61]} {Mouse: ENSMUSG00000028990, Lzic, leucine zipper and CTNNBIP1 domain containing, [RH, Score=190, Expect=2e-61]} {Celegans: WBGene00022885, ZK1248.19, [RH, Score=107, Expect=2e-29]} {RNA1509_8229} {RNA1310_42784} {RNA815_19558}
3. MligTC455_51477 5356 111.58 Mlig455_013510

Neo: -

Age: logFC(26M/2M)=-0.375

SCCPDH 1.762 0.795 - - - 0.967 - Mlig455_013510 {REF} {Length: 1859} {TRANSSPLICED} {Pfam: Saccharopine dehydrogenase NADP binding domain [PF03435.20, score=49.8]} {Human: ENSG00000143653, SCCPDH, saccharopine dehydrogenase (putative), [RH, Score=348, Expect=2e-116]} {Mouse: ENSMUSG00000038936, Sccpdh, saccharopine dehydrogenase (putative), [RH, Score=353, Expect=1e-118]} {Dmel: FBgn0038038, CG5167, [RH, Score=340, Expect=8e-114]} {Celegans: WBGene00017719, ldp-1, Lipid DroPlet localized protein, [RH, Score=281, Expect=6e-91]} {Smed: dd_Smed_v6_3019_0_1, dd_Smed_v6_3019_0_1, [RH, Score=361, Expect=2e-122]} {RNA1509_3404} {RNA1310_14618} {RNA815_5526}
4. MligTC455_25644 9013 187.77 Mlig455_011122

Neo: -

Age: Down-Up-Up

Region-enriched R7: 1.184/0.00000

PPIB 0.965 - - - - 0.965 - Mlig455_011122 {REF} {Length: 2368} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=163.3]} {Human: ENSG00000166794, PPIB, peptidylprolyl isomerase B, [RH, Score=261, Expect=7e-89]} {Mouse: ENSMUSG00000032383, Ppib, peptidylprolyl isomerase B, [RH, Score=261, Expect=4e-89]} {Dmel: FBgn0034753, CG2852, [Score=263, Expect=5e-90]} {Celegans: WBGene00000881, cyn-5, Peptidyl-prolyl cis-trans isomerase 5, [Score=254, Expect=1e-86]} {Smed: dd_Smed_v6_686_0_1, dd_Smed_v6_686_0_1, [RH, Score=282, Expect=1e-97]} {RNA1509_1368, RNA1509_13782, RNA1509_23006, RNA1509_2564, RNA1509_32628, RNA1509_57207} {RNA1310_21575.1, RNA1509_1368, RNA1509_13782, RNA1509_23006, RNA1509_2564, RNA1509_32628, RNA1509_57207} {RNA1509_1368, RNA1509_13782, RNA1509_23006, RNA1509_2564, RNA1509_32628, RNA1509_57207, RNA815_8543.1}
5. MligTC455_30071 419 8.73 Mlig455_004694

Neo: Int S/G2/M

Age: -

TOP3A 0.963 - - - - 0.963 - Mlig455_004694 {REF} {Length: 4052} {TRANSSPLICED} {Pfam: DNA topoisomerase [PF01131.22, score=365.2]; GRF zinc finger [PF06839.14, score=114.9]; Toprim domain [PF01751.24, score=65.1]; Topoisomerase DNA binding C4 zinc finger [PF01396.21, score=37.6]} {Human: ENSG00000284238, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]; ENSG00000177302, TOP3A, DNA topoisomerase III alpha, [RH, Score=940, Expect=0.0]} {Mouse: ENSMUSG00000002814, Top3a, topoisomerase (DNA) III alpha, [RH, Score=947, Expect=0.0]} {Dmel: FBgn0040268, Top3alpha, Topoisomerase 3alpha, [RH, Score=776, Expect=0.0]} {Celegans: WBGene00006596, top-3, DNA topoisomerase 3, [RH, Score=635, Expect=0.0]} {Smed: dd_Smed_v6_20479_0_1, dd_Smed_v6_20479_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_11005} {RNA1310_4689.1} {RNA815_5623}
6. MligTC455_53762 855 17.81 Mlig455_007187, Mlig455_007196, Mlig455_007257

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.523

Region-enriched R4: 1.692/0.03382

FMO2 0.952 - - - - 0.952 -

Mlig455_007187 {REF} {Length: 689} {RNA1509_52187} {RNA1310_11452.1} {RNA815_60752}

Mlig455_007196 {REF} {Length: 2037} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=62.8]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=30.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=29.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=25.1]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.0]; FAD dependent oxidoreductase [PF12831.9, score=21.1]; FAD dependent oxidoreductase [PF01266.26, score=19.0]} {Human: ENSG00000094963, FMO2, flavin containing monooxygenase 2, [Score=80.5, Expect=2e-15]; ENSG00000010932, FMO1, flavin containing monooxygenase 1, [Score=78.6, Expect=7e-15]; ENSG00000076258, FMO4, flavin containing monooxygenase 4, [Score=76.6, Expect=3e-14]} {Mouse: ENSMUSG00000086056, Gm4846, predicted gene 4846, [Score=85.1, Expect=4e-17]; ENSMUSG00000051081, Gm4847, predicted gene 4847, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=60.8, Expect=1e-09]} {RNA1509_59894} {RNA1310_11452.1} {RNA815_16767}

Mlig455_007257 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=106.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=34.9]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=31.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=29.9]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=27.3]; FAD dependent oxidoreductase [PF01266.26, score=24.9]; FAD-NAD(P)-binding [PF13454.8, score=23.9]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.7]; FAD dependent oxidoreductase [PF12831.9, score=20.6]} {Human: ENSG00000094963, FMO2, flavin containing monooxygenase 2, [Score=112, Expect=1e-25]; ENSG00000131781, FMO5, flavin containing monooxygenase 5, [Score=107, Expect=7e-24]} {Mouse: ENSMUSG00000086056, Gm4846, predicted gene 4846, [Score=135, Expect=4e-33]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=58.2, Expect=1e-08]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=95.1, Expect=3e-20]} {RNA1509_30219, RNA1509_52187, RNA1509_59894} {RNA1310_11452.1, RNA1509_30219, RNA1509_52187, RNA1509_59894} {RNA1509_30219, RNA1509_52187, RNA1509_59894, RNA815_16767}
7. MligTC455_41122 349 7.28 Mlig455_005107, Mlig455_005196

Neo: Int S/G2/M

Age: -

ANAPC5 0.95 - - - - 0.950 -

Mlig455_005107 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 5 [PF12862.9, score=26.0]} {Human: ENSG00000089053, ANAPC5, anaphase promoting complex subunit 5, [RH, Score=99.8, Expect=6e-21]} {Mouse: ENSMUSG00000029472, Anapc5, anaphase-promoting complex subunit 5, [RH, Score=89.4, Expect=7e-18]} {RNA1509_19224} {RNA1310_7274.1} {RNA815_8056}

Mlig455_005196 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 5 [PF12862.9, score=26.0]} {Human: ENSG00000089053, ANAPC5, anaphase promoting complex subunit 5, [RH, Score=100, Expect=5e-21]} {Mouse: ENSMUSG00000029472, Anapc5, anaphase-promoting complex subunit 5, [RH, Score=90.1, Expect=4e-18]} {RNA1509_19224} {RNA1310_7274.1, RNA1509_19224} {RNA1509_19224, RNA815_8056}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA