TomoSeq data search

Data search

Results for MligTC455_45069

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45069

4

0.08

Mlig455_009926

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.810

DICER1

Mlig455_009926 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=57.2]; Type III restriction enzyme, res subunit [PF04851.17, score=35.6]; DEAD/DEAH box helicase [PF00270.31, score=21.9]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=115, Expect=3e-26]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=120, Expect=1e-27]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=93.2, Expect=3e-19]} {Celegans: WBGene00000939, dcr-1, Endoribonuclease dcr-1, [Score=125, Expect=2e-29]} {Smed: dd_Smed_v6_8502_0_1, dd_Smed_v6_8502_0_1, [Score=219, Expect=6e-61]} {RNA1509_8443} {RNA1310_1036} {RNA815_4663}

Cumulative graph for MligTC455_45069

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_45069

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45069	4	0.08	Mlig455_009926	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.810	DICER1	1	-	-	-	-	1.000	-	Mlig455_009926 {REF} {Length: 2597} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=57.2]; Type III restriction enzyme, res subunit [PF04851.17, score=35.6]; DEAD/DEAH box helicase [PF00270.31, score=21.9]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=115, Expect=3e-26]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=120, Expect=1e-27]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=93.2, Expect=3e-19]} {Celegans: WBGene00000939, dcr-1, Endoribonuclease dcr-1, [Score=125, Expect=2e-29]} {Smed: dd_Smed_v6_8502_0_1, dd_Smed_v6_8502_0_1, [Score=219, Expect=6e-61]} {RNA1509_8443} {RNA1310_1036} {RNA815_4663}
2.	MligTC455_21331	24	0.51	Mlig455_020847	Neo: - Age: -		0.992	-	-	-	-	0.992	-	Mlig455_020847 {REF} {Length: 1646} {RNA1509_46103} {RNA1310_42929} {RNA815_8813.1}
3.	MligTC455_04725	11	0.23	Mlig455_018907	Neo: - Age: -		0.988	-	-	-	-	0.988	-	Mlig455_018907 {REF} {Length: 2644} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=21.3]} {RNA1310_10378.1} {RNA815_32677}
4.	MligTC455_29760	19	0.39	Mlig455_013569	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_013569 {REF} {Length: 2248} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35898} {RNA1310_38329} {RNA815_47127}
5.	MligTC455_01748	7	0.14	Mlig455_069217	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_069217 {REF} {Length: 1489} {RNA1509_22651} {RNA1310_34838} {RNA815_2514.1}
6.	MligTC455_22019	18	0.38	Mlig455_006619, Mlig455_023141	Neo: - Age: -	RTL1	0.971	-	-	-	-	0.971	-	Mlig455_006619 {REF} {Length: 7104} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=59.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=80.5, Expect=5e-17]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=138, Expect=1e-39]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192} Mlig455_023141 {REF} {Length: 2489} {Pfam: PNMA [PF14893.8, score=26.4]} {RNA1509_38146, RNA1509_39864} {RNA1310_9809, RNA1509_39864} {RNA1509_39864, RNA815_20192}
7.	MligTC455_34727	96	2	Mlig455_041259	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.811 Region-enriched R8: 4.340/0.01025	GLIPR1	0.968	-	-	-	-	0.968	-	Mlig455_041259 {REF} {Length: 5028} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.4]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [RH, Score=107, Expect=7e-26]} {Dmel: FBgn0038126, CG8483, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00003055, lon-1, LONg, [Score=67.0, Expect=6e-12]} {Smed: dd_Smed_v6_681_0_1, dd_Smed_v6_681_0_1, [Score=104, Expect=1e-25]} {RNA1509_36146} {RNA1310_23199} {RNA815_7031}
8.	MligTC455_12580	117	2.45	Mlig455_042777	Neo: - Age: Up-Down-Down	LRCH3	0.95	-	-	-	-	0.950	-	Mlig455_042777 {REF} {Length: 4110} {Pfam: Leucine rich repeat [PF13855.8, score=75.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=49.6]} {Human: ENSG00000186001, LRCH3, leucine rich repeats and calponin homology domain containing 3, [Score=145, Expect=8e-37]; ENSG00000136141, LRCH1, leucine rich repeats and calponin homology domain containing 1, [Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000022801, Lrch3, leucine-rich repeats and calponin homology (CH) domain containing 3, [Score=145, Expect=7e-37]; ENSMUSG00000068015, Lrch1, leucine-rich repeats and calponin homology (CH) domain containing 1, [Score=139, Expect=1e-34]} {Dmel: FBgn0032633, Lrch, Leucine-rich-repeats and calponin homology domain protein, [Score=121, Expect=5e-29]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=74.7, Expect=6e-14]} {Smed: dd_Smed_v6_12270_0_1, dd_Smed_v6_12270_0_1, [Score=111, Expect=8e-26]} {RNA1509_38422} {RNA1310_15035.1} {RNA815_5934}

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