M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_45259

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45259 767 15.98 Mlig455_030209, Mlig455_067983

Neo: -

Age: -

Region-enriched R6: 2.079/0.00796
Region-enriched R3: 1.896/0.01466

Regeneration-upregulated TP: 4.600

Regeneration-enriched TP: 4.600

 SARAF

Mlig455_030209 {REF} {Length: 1291} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083}

Mlig455_067983 {REF} {Length: 1106} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=155.0]} {Human: ENSG00000133872, SARAF, store-operated calcium entry associated regulatory factor, [Score=90.5, Expect=7e-21]} {Mouse: ENSMUSG00000031532, Saraf, store-operated calcium entry-associated regulatory factor, [Score=77.8, Expect=2e-16]} {Celegans: WBGene00011529, T06D8.9, [Score=86.7, Expect=6e-20]} {Smed: dd_Smed_v6_809_0_1, dd_Smed_v6_809_0_1, [Score=105, Expect=3e-27]} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083}

Cumulative graph for MligTC455_45259

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.126 4.213 0.85036 1.00000
RegionR2 -0.271 4.213 0.88284 1.00000
RegionR3 1.896 4.213 0.00041 0.01466
RegionR4 1.61 4.213 0.01119 0.06653
RegionR5 0.062 4.213 0.75416 1.00000
RegionR6 2.079 4.213 0.00010 0.00796
RegionR7 1.756 4.213 0.00651 0.13167
RegionR8 -7.006 4.213 0.00190 0.07221

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.066 4.213 0.09200 0.80142
RegenerationR2 0.261 4.213 0.57878 0.90640
RegenerationR3 0.437 4.213 0.29207 0.72411
RegenerationR4 0.186 4.213 0.67480 0.94408
RegenerationR5 1.192 4.213 0.01073 0.18314
RegenerationR6 -0.622 4.213 0.15264 0.47852
RegenerationBL 1.583 4.213 0.19868 0.53624
RegenerationTP 4.6 4.213 0.00002 0.00341 Specific for TP: 4.600


Genes with expression patterns similar to MligTC455_45259

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45259 767 15.98 Mlig455_030209, Mlig455_067983

Neo: -

Age: -

Region-enriched R6: 2.079/0.00796
Region-enriched R3: 1.896/0.01466

Regeneration-upregulated TP: 4.600

Regeneration-enriched TP: 4.600

 SARAF 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_030209 {REF} {Length: 1291} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083}

Mlig455_067983 {REF} {Length: 1106} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=155.0]} {Human: ENSG00000133872, SARAF, store-operated calcium entry associated regulatory factor, [Score=90.5, Expect=7e-21]} {Mouse: ENSMUSG00000031532, Saraf, store-operated calcium entry-associated regulatory factor, [Score=77.8, Expect=2e-16]} {Celegans: WBGene00011529, T06D8.9, [Score=86.7, Expect=6e-20]} {Smed: dd_Smed_v6_809_0_1, dd_Smed_v6_809_0_1, [Score=105, Expect=3e-27]} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083}
2. MligTC455_49947 15947 332.23 Mlig455_032811

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.955/0.00000

 2.47 - - - 0.962 0.780 0.728 Mlig455_032811 {REF} {Length: 1080} {RNA1509_1805, RNA1509_19404} {RNA1310_46290.1, RNA1509_1805, RNA1509_19404} {RNA1509_1805, RNA1509_19404, RNA815_17046}
3. MligTC455_52252 1382 28.78 Mlig455_024739

Neo: -

Age: logFC(26M/2M)=0.552

Region-enriched R7: 1.831/0.00005
Region-enriched R8: 1.551/0.03354

 CD63 1.733 - - - 0.976 0.757 - Mlig455_024739 {REF} {Length: 1912} {Pfam: Tetraspanin family [PF00335.22, score=139.2]} {Human: ENSG00000135404, CD63, CD63 molecule, [Score=84.7, Expect=8e-19]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=79.0, Expect=7e-17]; ENSMUSG00000027215, Cd82, CD82 antigen, [Score=78.2, Expect=2e-16]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=98.6, Expect=6e-24]} {Celegans: WBGene00006637, tsp-11, Tetraspanin, [RH, Score=75.5, Expect=1e-15]} {Smed: dd_Smed_v6_2698_0_1, dd_Smed_v6_2698_0_1, [RH, Score=159, Expect=3e-47]} {RNA1509_12441} {RNA1310_16211, RNA1509_12441} {RNA1509_12441, RNA815_7034.1}
4. MligTC455_43755 1306 27.21 Mlig455_010280

Neo: -

Age: -

Region-enriched R7: 1.117/0.04060

Regeneration-downregulated BL: -2.741

Regeneration-depleted BL: -2.741

 SMTN 1.726 - - - 0.954 0.772 - Mlig455_010280 {REF} {Length: 2087} {Pfam: Calponin homology (CH) domain [PF00307.33, score=83.4]; Smoothelin cytoskeleton protein [PF12510.10, score=35.2]; CAMSAP CH domain [PF11971.10, score=32.4]} {Human: ENSG00000183963, SMTN, smoothelin, [RH, Score=168, Expect=2e-45]} {Mouse: ENSMUSG00000020439, Smtn, smoothelin, [RH, Score=162, Expect=2e-43]} {Dmel: FBgn0085446, CG34417, [RH, Score=160, Expect=7e-43]} {Celegans: WBGene00020530, T15B12.1, [RH, Score=144, Expect=4e-39]} {Smed: dd_Smed_v6_2554_0_1, dd_Smed_v6_2554_0_1, [RH, Score=176, Expect=2e-54]} {RNA1509_21748} {RNA1310_16112} {RNA815_14550}
5. MligTC455_33541 737 15.35 Mlig455_018383

Neo: -

Age: -

Region-enriched R7: 1.927/0.00000

Regeneration-depleted BL: -3.014
Regeneration-depleted R6: -2.524
Regeneration-depleted R4: -2.464

 1.708 - - - 0.986 0.722 - Mlig455_018383 {REF} {Length: 4603} {Pfam: Integrase core domain [PF00665.28, score=38.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_22047} {RNA1310_12146, RNA1509_22047} {RNA1509_22047, RNA815_12140}
6. MligTC455_38826 244 5.08 Mlig455_059316

Neo: -

Age: Up-Down-Up

Region-enriched R8: 3.511/0.00478

 RDX 0.981 - - - 0.981 - - Mlig455_059316 {REF} {Length: 3395} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}
7. MligTC455_47986 81 1.69 Mlig455_069736

Neo: -

Age: -

 0.978 - - - 0.978 - - Mlig455_069736 {REF} {Length: 439} {RNA1310_81796} {RNA815_47965}
8. MligTC455_53105 228 4.75 Mlig455_055848

Neo: -

Age: logFC(26M/2M)=0.399

 CHRNA3 0.974 - - - 0.974 - - Mlig455_055848 {REF} {Length: 4579} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=83.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=97.1, Expect=2e-22]; ENSG00000138435, CHRNA1, cholinergic receptor nicotinic alpha 1 subunit, [Score=93.2, Expect=2e-21]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=99.0, Expect=3e-23]; ENSMUSG00000027107, Chrna1, cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), [Score=97.8, Expect=6e-23]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=94.4, Expect=1e-21]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=92.8, Expect=2e-21]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=112, Expect=1e-28]} {RNA1509_35396} {RNA1310_25168.1, RNA1509_35396} {RNA1509_35396, RNA815_2979.1}
9. MligTC455_37780 169 3.52 Mlig455_010706

Neo: -

Age: -

 0.972 - - - 0.972 - - Mlig455_010706 {REF} {Length: 723} {RNA1310_80804}
10. MligTC455_47982 161 3.36 Mlig455_057482

Neo: -

Age: -

 0.972 - - - 0.972 - - Mlig455_057482 {REF} {Length: 2334} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=58.0]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=41.8]; Wzt C-terminal domain [PF14524.8, score=19.3]} {Dmel: FBgn0037853, CG14696, [Score=57.8, Expect=4e-09]} {Celegans: WBGene00011054, arrd-13, ARRestin Domain protein, [Score=66.2, Expect=7e-12]} {RNA1310_15033.1} {RNA815_13583}
11. MligTC455_33004 291 6.07 Mlig455_035954, Mlig455_058423

Neo: -

Age: Down-Up-Up

Region-enriched R8: 3.765/0.00001
Region-enriched R7: 2.479/0.03424

 LRP12 0.971 - - - 0.971 - -

Mlig455_035954 {REF} {Length: 2125} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=47.4, Expect=1e-05]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]} {RNA1509_18736} {RNA1310_23783.1} {RNA815_18491}

Mlig455_058423 {REF} {Length: 1426} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=48.5, Expect=6e-06]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]; ENSMUSG00000036902, Neto2, neuropilin (NRP) and tolloid (TLL)-like 2, [Score=48.5, Expect=4e-06]} {RNA1310_23783.1} {RNA815_18491}
12. MligTC455_45008 629 13.1 Mlig455_016672

Neo: -

Age: logFC(26M/2M)=-0.566

Region-enriched R7: 2.290/0.00017
Region-enriched R6: 1.566/0.02986

 0.968 - - - 0.968 - - Mlig455_016672 {REF} {Length: 1196} {RNA1509_41773} {RNA1310_50243, RNA1509_41773} {RNA1509_41773, RNA815_30201}
13. MligTC455_38827 168 3.49 Mlig455_065185

Neo: -

Age: -

Region-enriched R8: 3.346/0.01415

 RDX 0.966 - - - 0.966 - - Mlig455_065185 {REF} {Length: 3409} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}
14. MligTC455_14414 500 10.42 Mlig455_065956

Neo: -

Age: logFC(26M/2M)=2.723

 SPDEF 0.965 - - - 0.965 - - Mlig455_065956 {REF} {Length: 1405} {Pfam: Ets-domain [PF00178.24, score=67.5]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.5, Expect=1e-09]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=70.1, Expect=6e-13]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=60.5, Expect=5e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1}
15. MligTC455_47455 38 0.8 Mlig455_068559

Neo: -

Age: -

Region-enriched R4: 4.331/0.04578

 0.965 - - - 0.965 - - Mlig455_068559 {REF} {Length: 956} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.0]} {RNA1509_58025} {RNA1310_26224} {RNA815_14744.1}
16. MligTC455_43308 515 10.73 Mlig455_007837, Mlig455_021119

Neo: -

Age: -

Region-enriched R7: 4.797/0.00000

 0.964 - - - 0.964 - -

Mlig455_007837 {REF} {Length: 466} {RNA1310_58059} {RNA815_34499}

Mlig455_021119 {REF} {Length: 472} {RNA1310_58059} {RNA815_34499}
17. MligTC455_20288 28 0.59 Mlig455_008375, Mlig455_032683, Mlig455_064140

Neo: -

Age: -

 0.962 - - - 0.962 - -

Mlig455_008375 {REF} {Length: 3945} {NoTransDecoderORF} {RNA1310_53241}

Mlig455_032683 {REF} {Length: 1520} {NoTransDecoderORF} {RNA1310_53241}

Mlig455_064140 {REF} {Length: 1504} {NoTransDecoderORF} {RNA1310_53241}
18. MligTC455_18763 204 4.25 Mlig455_023704

Neo: -

Age: -

Region-enriched R6: 3.960/0.00001
Region-enriched R8: 3.900/0.02321

 RASEF 0.959 - - - 0.959 - - Mlig455_023704 {REF} {Length: 2598} {Pfam: Ras family [PF00071.24, score=164.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=102.5]; ADP-ribosylation factor family [PF00025.23, score=59.0]; EF-hand domain pair [PF13499.8, score=47.9]; EF hand [PF00036.34, score=38.9]; EF-hand domain [PF13405.8, score=38.8]; 50S ribosome-binding GTPase [PF01926.25, score=37.4]; EF-hand domain pair [PF13833.8, score=32.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=30.1]; EF hand [PF13202.8, score=24.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.3]; RsgA GTPase [PF03193.18, score=22.2]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=201, Expect=5e-55]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=203, Expect=4e-57]} {Dmel: FBgn0086913, Rab26, [Score=144, Expect=3e-37]} {Celegans: WBGene00016344, rsef-1, Ras and EF-hand domain-containing protein homolog, [RH, Score=214, Expect=2e-60]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=209, Expect=8e-58]} {RNA1509_35225} {RNA1310_5487} {RNA815_12441}
19. MligTC455_24518 67 1.4 Mlig455_013756

Neo: -

Age: -

 CASP3 0.959 - - - - - 0.959 Mlig455_013756 {REF} {Length: 7853} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.0]; Ankyrin repeats (many copies) [PF13637.8, score=85.9]; Ankyrin repeat [PF00023.32, score=69.1]; Ankyrin repeat [PF13606.8, score=67.4]; Caspase domain [PF00656.24, score=58.2]; Ankyrin repeats (many copies) [PF13857.8, score=49.4]; Mab-21 protein [PF03281.16, score=33.8]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=73.2, Expect=5e-13]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=75.9, Expect=4e-14]} {Dmel: FBgn0261554, CG42672, [Score=67.8, Expect=1e-10]} {Celegans: WBGene00016030, C24A1.3, [Score=73.9, Expect=9e-13]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=72.8, Expect=2e-13]} {RNA1509_21569} {RNA1310_2148.1, RNA1509_21569} {RNA1509_21569, RNA815_10025}
20. MligTC455_30564 63 1.31 Mlig455_068123

Neo: -

Age: -

Region-enriched R4: 8.969/0.00000

Regeneration-downregulated R4: -2.413

Regeneration-depleted R4: -2.413

 0.959 - - - 0.959 - - Mlig455_068123 {REF} {Length: 1108} {RNA1509_21645} {RNA1310_14778} {RNA815_12230.2}
21. MligTC455_33454 464 9.67 Mlig455_036962, Mlig455_069816

Neo: -

Age: Down-Up-Down

 0.958 - - - 0.958 - -

Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}

Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}
22. MligTC455_34930 107 2.23 Mlig455_046204

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.704

Region-enriched R7: 4.974/0.00000
Region-enriched R6: 3.069/0.03030

 WSCD2 0.956 - - - 0.956 - - Mlig455_046204 {REF} {Length: 1084} {Pfam: WSC domain [PF01822.21, score=88.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=65.9, Expect=5e-12]} {RNA1509_16229} {RNA1310_21587} {RNA815_23259}
23. MligTC455_40933 1475 30.72 Mlig455_022066, Mlig455_053606

Neo: -

Age: -

Region-enriched R6: 3.526/0.00000
Region-enriched R3: 2.241/0.00006
Region-enriched R7: 2.045/0.00250

 0.956 - - - 0.956 - -

Mlig455_022066 {REF} {Length: 1983} {Pfam: Protein of unknown function (DUF1647) [PF07801.13, score=56.6]} {Dmel: FBgn0033236, CG14764, [Score=72.4, Expect=1e-13]} {Celegans: WBGene00009312, F32B4.1, [RH, Score=113, Expect=1e-27]} {Smed: dd_Smed_v6_8359_0_1, dd_Smed_v6_8359_0_1, [Score=103, Expect=1e-24]} {RNA1509_37046, RNA1509_38453} {RNA1310_12408.1, RNA1509_37046, RNA1509_38453} {RNA1509_37046, RNA1509_38453, RNA815_7428}

Mlig455_053606 {REF} {Length: 3064} {Pfam: Protein of unknown function (DUF1647) [PF07801.13, score=56.6]} {Dmel: FBgn0033236, CG14764, [Score=72.4, Expect=1e-13]} {Celegans: WBGene00009312, F32B4.1, [RH, Score=113, Expect=1e-27]} {Smed: dd_Smed_v6_8359_0_1, dd_Smed_v6_8359_0_1, [Score=103, Expect=1e-24]} {RNA1509_38453} {RNA1310_12408.1} {RNA815_7428}
24. MligTC455_07760 263 5.49 Mlig455_050264

Neo: -

Age: Down-Down-Up

Region-enriched R7: 4.077/0.00000
Region-enriched R8: 3.171/0.00732
Region-enriched R2: 2.637/0.02861

 0.955 - - - 0.955 - - Mlig455_050264 {REF} {Length: 1509} {RNA1509_49826} {RNA1310_40090} {RNA815_20296.1}
25. MligTC455_16297 601 12.51 Mlig455_004041

Neo: -

Age: -

 0.955 - - - 0.955 - - Mlig455_004041 {REF} {Length: 3354} {Pfam: Mab-21 protein [PF03281.16, score=69.1]} {RNA1509_6443} {RNA1310_5005, RNA1509_6443} {RNA1509_6443, RNA815_2046}
26. MligTC455_17557 200 4.16 Mlig455_022008, Mlig455_058846

Neo: -

Age: -

 0.955 - - - 0.955 - -

Mlig455_022008 {REF} {Length: 1560} {TRANSSPLICED} {Pfam: Tap RepA1 leader peptide [PF08048.14, score=36.1]} {Mouse: ENSMUSG00000050463, Krt78, keratin 78, [Score=82.0, Expect=2e-16]} {RNA1509_27850} {RNA1310_61376.1} {RNA815_49532}

Mlig455_058846 {REF} {Length: 1582} {TRANSSPLICED} {Pfam: Tap RepA1 leader peptide [PF08048.14, score=35.1]} {RNA1509_27850} {RNA1310_61376.1, RNA1509_27850} {RNA1509_27850, RNA815_49532}
27. MligTC455_25854 1015 21.15 Mlig455_052672

Neo: -

Age: logFC(26M/2M)=-0.640

Region-specific R8: 3.800
Region-specific R7: 3.633

Region-enriched R8: 3.703/0.00000
Region-enriched R7: 3.081/0.00000

Regeneration-downregulated BL: -2.563

Regeneration-depleted BL: -2.563

 0.955 - - - 0.955 - - Mlig455_052672 {REF} {Length: 1364} {Pfam: PLAC8 family [PF04749.19, score=60.9]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=98.2, Expect=1e-26]} {RNA1509_58157} {RNA1310_24348, RNA1509_58157} {RNA1509_58157, RNA815_10637.1}
28. MligTC455_08495 13994 291.54 Mlig455_028449

Neo: -

Age: logFC(26M/2M)=-0.643

Region-enriched R8: 6.854/0.00000
Region-enriched R7: 6.810/0.00000

Regeneration-depleted R6: -9.104
Regeneration-depleted BL: -8.000

 0.954 - - - 0.954 - - Mlig455_028449 {REF} {Length: 310} {TRANSSPLICED} {RNA1509_13235, RNA1509_3727, RNA1509_53808, RNA1509_5921, RNA1509_8162} {RNA1310_68283, RNA1509_13235, RNA1509_3727, RNA1509_53808, RNA1509_5921, RNA1509_8162} {RNA1509_13235, RNA1509_3727, RNA1509_53808, RNA1509_5921, RNA1509_8162, RNA815_35806}
29. MligTC455_22921 848 17.66 Mlig455_048030

Neo: -

Age: -

Region-enriched R8: 6.496/0.00000
Region-enriched R7: 5.319/0.00000

Regeneration-downregulated BL: -8.561

Regeneration-depleted BL: -8.561

 CNTNAP1 0.954 - - - 0.954 - - Mlig455_048030 {REF} {Length: 2506} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=31.2]; Spondin-like TSP1 domain [PF19028.2, score=23.9]; Thrombospondin type 1 domain [PF19030.2, score=20.8]} {Human: ENSG00000108797, CNTNAP1, contactin associated protein 1, [Score=65.5, Expect=3e-11]} {Mouse: ENSMUSG00000017167, Cntnap1, contactin associated protein-like 1, [Score=69.3, Expect=1e-12]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [Score=63.5, Expect=6e-11]} {Celegans: WBGene00003772, nlr-1, Neurexin Like receptor, [Score=60.8, Expect=3e-10]} {Smed: dd_Smed_v6_2622_0_1, dd_Smed_v6_2622_0_1, [Score=70.5, Expect=2e-13]} {RNA1509_12135} {RNA1310_13292} {RNA815_6015.1}
30. MligTC455_47725 145 3.03 Mlig455_035517

Neo: -

Age: -

 ANK2 0.954 - - - 0.954 - - Mlig455_035517 {REF} {Length: 2748} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.1]; Ankyrin repeats (many copies) [PF13637.8, score=109.8]; Ankyrin repeat [PF13606.8, score=94.3]; Ankyrin repeat [PF00023.32, score=92.9]; Ankyrin repeats (many copies) [PF13857.8, score=89.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=99.0, Expect=6e-21]; ENSG00000151150, ANK3, ankyrin 3, [Score=97.1, Expect=2e-20]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=98.6, Expect=5e-21]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=97.1, Expect=1e-20]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=6e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=85.5, Expect=2e-17]} {RNA1509_10844} {RNA1310_6519} {RNA815_7473}
31. MligTC455_26645 132 2.74 Mlig455_032393, Mlig455_032437

Neo: -

Age: -

 B4GALT1 0.952 - - - 0.952 - -

Mlig455_032393 {REF} {Length: 2140} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=128.2]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=178, Expect=1e-51]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=174, Expect=4e-50]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=174, Expect=7e-51]} {RNA1310_17913} {RNA815_20156}

Mlig455_032437 {REF} {Length: 2249} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=126.3]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=181, Expect=9e-53]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=176, Expect=5e-51]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=172, Expect=3e-50]} {RNA1310_17913} {RNA815_20156}
32. MligTC455_23945 817 17.03 Mlig455_014012

Neo: -

Age: -

Region-enriched R7: 2.794/0.00000
Region-enriched R8: 2.445/0.00002

Regeneration-downregulated BL: -3.790

Regeneration-depleted BL: -3.790

 0.951 - - - 0.951 - - Mlig455_014012 {REF} {Length: 906} {TRANSSPLICED} {RNA1509_17939} {RNA1310_33876} {RNA815_9418.2}
33. MligTC455_24483 1015 21.14 Mlig455_001241

Neo: -

Age: -

Region-enriched R7: 2.426/0.00000
Region-enriched R6: 2.326/0.00000

Regeneration-downregulated R6: -2.547

Regeneration-depleted R6: -2.547

 0.951 - - - 0.951 - - Mlig455_001241 {REF} {Length: 2882} {Pfam: TMEM154 protein family [PF15102.8, score=19.9]; Amnionless [PF14828.8, score=18.8]} {RNA1509_28830} {RNA1310_37428.2} {RNA815_17791}
34. MligTC455_30334 98 2.04 Mlig455_049981

Neo: -

Age: logFC(26M/2M)=0.403

Region-enriched R6: 4.680/0.00020
Region-enriched R3: 3.922/0.00768

 TUBB3 0.951 - - - 0.951 - - Mlig455_049981 {REF} {Length: 1954} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.4]; Tubulin C-terminal domain [PF03953.19, score=143.8]; Misato Segment II tubulin-like domain [PF10644.11, score=21.0]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=832, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=815, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=832, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=815, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=833, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=846, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=855, Expect=0.0]} {RNA1509_5590} {RNA1310_15130.1} {RNA815_1610.1}
35. MligTC455_31205 692 14.43 Mlig455_035182

Neo: -

Age: -

Regeneration-downregulated BL: -4.130

Regeneration-depleted BL: -4.130

 0.951 - - - 0.951 - - Mlig455_035182 {REF} {Length: 4527} {RNA1509_16671} {RNA1310_20265} {RNA815_30295}
36. MligTC455_40843 30 0.63 Mlig455_003755, Mlig455_037955

Neo: -

Age: -

 0.951 - - - 0.951 - -

Mlig455_003755 {REF} {Length: 1280} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=120.7]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=57.8, Expect=1e-08]} {Celegans: WBGene00016064, acd-1, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_9790_0_1, dd_Smed_v6_9790_0_1, [Score=149, Expect=1e-39]}

Mlig455_037955 {REF} {Length: 1816} {RNA1509_37251} {RNA1310_31937.1} {RNA815_25998}
37. MligTC455_43135 150 3.13 Mlig455_010595

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_010595 {REF} {Length: 2471} {Pfam: BTB/POZ domain [PF00651.33, score=32.6]} {Celegans: WBGene00018437, btb-8, BTB (Broad/complex/Tramtrack/Bric a brac) domain protein, [RH, Score=51.6, Expect=3e-07]} {RNA1509_23896} {RNA1310_24136, RNA1509_23896} {RNA1509_23896, RNA815_10884}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA