TomoSeq data search

Data search

Results for MligTC455_47455

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47455

38

0.80

Mlig455_068559

Neo: -

Age: -

Region-enriched R4: 4.331/0.04578

Mlig455_068559 {REF} {Length: 956} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.0]} {RNA1509_58025} {RNA1310_26224} {RNA815_14744.1}

Cumulative graph for MligTC455_47455

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.168	1.005	0.99984	1.00000
RegionR2	-0.043	1.005	0.47785	0.86246
RegionR3	-0.798	1.005	0.99983	1.00000
RegionR4	4.331	1.005	0.00675	0.04578
RegionR5	0.231	1.005	0.99982	1.00000
RegionR6	-0.873	1.005	0.99984	1.00000
RegionR7	-1.08	1.005	0.99987	1.00000
RegionR8	-0.599	1.005	0.99988	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.096	1.005	1.00000	1.00000
RegenerationR2	0.973	1.005	0.47601	0.86104
RegenerationR3	2.265	1.005	0.18175	0.61852
RegenerationR4	-0.008	1.005	0.92939	1.00000
RegenerationR5	2.4	1.005	0.09565	0.47379
RegenerationR6	2.736	1.005	0.17574	0.50870
RegenerationBL	-0.998	1.005	0.99997	1.00000
RegenerationTP	4.122	1.005	0.15347	0.57942

Genes with expression patterns similar to MligTC455_47455

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47455	38	0.8	Mlig455_068559	Neo: - Age: - Region-enriched R4: 4.331/0.04578		3	-	-	-	1.000	1.000	1.000	Mlig455_068559 {REF} {Length: 956} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.0]} {RNA1509_58025} {RNA1310_26224} {RNA815_14744.1}
2.	MligTC455_47986	81	1.69	Mlig455_069736	Neo: - Age: -		1.765	-	-	-	0.981	-	0.784	Mlig455_069736 {REF} {Length: 439} {RNA1310_81796} {RNA815_47965}
3.	MligTC455_37780	169	3.52	Mlig455_010706	Neo: - Age: -		0.986	-	-	-	0.986	-	-	Mlig455_010706 {REF} {Length: 723} {RNA1310_80804}
4.	MligTC455_07760	263	5.49	Mlig455_050264	Neo: - Age: Down-Down-Up Region-enriched R7: 4.077/0.00000 Region-enriched R8: 3.171/0.00732 Region-enriched R2: 2.637/0.02861		0.98	-	-	-	0.980	-	-	Mlig455_050264 {REF} {Length: 1509} {RNA1509_49826} {RNA1310_40090} {RNA815_20296.1}
5.	MligTC455_23886	23	0.47	Mlig455_029403	Neo: - Age: Down-Up-Down		0.98	-	-	-	0.980	-	-	Mlig455_029403 {REF} {Length: 1827} {Pfam: Caspase domain [PF00656.24, score=47.0]} {RNA1310_26000} {RNA815_31431}
6.	MligTC455_31990	61	1.28	Mlig455_070961	Neo: - Age: Down-Up-Down		0.974	-	-	-	0.974	-	-	Mlig455_070961 {REF} {Length: 873} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110}
7.	MligTC455_26645	132	2.74	Mlig455_032393, Mlig455_032437	Neo: - Age: -	B4GALT1	0.971	-	-	-	0.971	-	-	Mlig455_032393 {REF} {Length: 2140} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=128.2]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=178, Expect=1e-51]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=174, Expect=4e-50]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=174, Expect=7e-51]} {RNA1310_17913} {RNA815_20156} Mlig455_032437 {REF} {Length: 2249} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=126.3]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=181, Expect=9e-53]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=176, Expect=5e-51]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=172, Expect=3e-50]} {RNA1310_17913} {RNA815_20156}
8.	MligTC455_45259	767	15.98	Mlig455_030209, Mlig455_067983	Neo: - Age: - Region-enriched R6: 2.079/0.00796 Region-enriched R3: 1.896/0.01466 Regeneration-upregulated TP: 4.600 Regeneration-enriched TP: 4.600	SARAF	0.965	-	-	-	0.965	-	-	Mlig455_030209 {REF} {Length: 1291} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083} Mlig455_067983 {REF} {Length: 1106} {Pfam: SOCE-associated regulatory factor of calcium homoeostasis [PF06682.14, score=155.0]} {Human: ENSG00000133872, SARAF, store-operated calcium entry associated regulatory factor, [Score=90.5, Expect=7e-21]} {Mouse: ENSMUSG00000031532, Saraf, store-operated calcium entry-associated regulatory factor, [Score=77.8, Expect=2e-16]} {Celegans: WBGene00011529, T06D8.9, [Score=86.7, Expect=6e-20]} {Smed: dd_Smed_v6_809_0_1, dd_Smed_v6_809_0_1, [Score=105, Expect=3e-27]} {RNA1509_18433} {RNA1310_23954.2} {RNA815_12083}
9.	MligTC455_14414	500	10.42	Mlig455_065956	Neo: - Age: logFC(26M/2M)=2.723	SPDEF	0.961	-	-	-	0.961	-	-	Mlig455_065956 {REF} {Length: 1405} {Pfam: Ets-domain [PF00178.24, score=67.5]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.5, Expect=1e-09]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=70.1, Expect=6e-13]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=60.5, Expect=5e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1}
10.	MligTC455_47725	145	3.03	Mlig455_035517	Neo: - Age: -	ANK2	0.96	-	-	-	0.960	-	-	Mlig455_035517 {REF} {Length: 2748} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.1]; Ankyrin repeats (many copies) [PF13637.8, score=109.8]; Ankyrin repeat [PF13606.8, score=94.3]; Ankyrin repeat [PF00023.32, score=92.9]; Ankyrin repeats (many copies) [PF13857.8, score=89.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=99.0, Expect=6e-21]; ENSG00000151150, ANK3, ankyrin 3, [Score=97.1, Expect=2e-20]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=98.6, Expect=5e-21]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=97.1, Expect=1e-20]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=85.1, Expect=6e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=85.5, Expect=2e-17]} {RNA1509_10844} {RNA1310_6519} {RNA815_7473}
11.	MligTC455_20288	28	0.59	Mlig455_008375, Mlig455_032683, Mlig455_064140	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_008375 {REF} {Length: 3945} {NoTransDecoderORF} {RNA1310_53241} Mlig455_032683 {REF} {Length: 1520} {NoTransDecoderORF} {RNA1310_53241} Mlig455_064140 {REF} {Length: 1504} {NoTransDecoderORF} {RNA1310_53241}
12.	MligTC455_34930	107	2.23	Mlig455_046204	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.704 Region-enriched R7: 4.974/0.00000 Region-enriched R6: 3.069/0.03030	WSCD2	0.954	-	-	-	0.954	-	-	Mlig455_046204 {REF} {Length: 1084} {Pfam: WSC domain [PF01822.21, score=88.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=65.9, Expect=5e-12]} {RNA1509_16229} {RNA1310_21587} {RNA815_23259}
13.	MligTC455_38826	244	5.08	Mlig455_059316	Neo: - Age: Up-Down-Up Region-enriched R8: 3.511/0.00478	RDX	0.953	-	-	-	0.953	-	-	Mlig455_059316 {REF} {Length: 3395} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}
14.	MligTC455_19554	56	1.16	Mlig455_060596	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_060596 {REF} {Length: 2387} {NoTransDecoderORF} {RNA1509_45664} {RNA1310_50767}
15.	MligTC455_27253	1088	22.67	Mlig455_020126	Neo: - Age: Down-Down-Up		0.951	-	-	-	0.951	-	-	Mlig455_020126 {REF} {Length: 1343} {RNA1509_17721} {RNA1310_36348, RNA1509_17721} {RNA1509_17721, RNA815_19211}
16.	MligTC455_53105	228	4.75	Mlig455_055848	Neo: - Age: logFC(26M/2M)=0.399	CHRNA3	0.951	-	-	-	0.951	-	-	Mlig455_055848 {REF} {Length: 4579} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=83.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=97.1, Expect=2e-22]; ENSG00000138435, CHRNA1, cholinergic receptor nicotinic alpha 1 subunit, [Score=93.2, Expect=2e-21]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=99.0, Expect=3e-23]; ENSMUSG00000027107, Chrna1, cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle), [Score=97.8, Expect=6e-23]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=94.4, Expect=1e-21]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=95.1, Expect=5e-22]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=92.8, Expect=2e-21]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=112, Expect=1e-28]} {RNA1509_35396} {RNA1310_25168.1, RNA1509_35396} {RNA1509_35396, RNA815_2979.1}
17.	MligTC455_20319	207	4.31	Mlig455_062260	Neo: - Age: -	CSPP1	0.95	-	-	-	-	0.950	-	Mlig455_062260 {REF} {Length: 5222} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [RH, Score=142, Expect=1e-33]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [RH, Score=144, Expect=2e-34]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [RH, Score=140, Expect=1e-33]} {RNA1509_41667, RNA1509_4731} {RNA1310_5083.1, RNA1509_41667, RNA1509_4731} {RNA1509_41667, RNA1509_4731, RNA815_9871}

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